Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0220.Seq
         (903 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    38   6e-04
EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.           27   0.78 
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    25   2.4  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   3.1  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   7.3  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 37.5 bits (83), Expect = 6e-04
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = +1

Query: 352 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGK 507
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G+
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGR 212



 Score = 32.7 bits (71), Expect = 0.016
 Identities = 13/25 (52%), Positives = 19/25 (76%)
 Frame = +3

Query: 504 KDLVGVPKTGSGKTLAYILPAIVHI 578
           +DL+   +TGSGKT A++LP I H+
Sbjct: 212 RDLMACAQTGSGKTAAFMLPMIHHL 236


>EF519370-1|ABP68479.1|  452|Anopheles gambiae LRIM1 protein.
          Length = 452

 Score = 27.1 bits (57), Expect = 0.78
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +3

Query: 105 TVVPNLEEATNSAIILLDLATVAIDLEDLEDLVGKKNSLE 224
           T++ +L+E   S +  LDL    ID  +L +L    +SLE
Sbjct: 140 TMLRDLDEGCRSRVQYLDLKLNEIDTVNLAELAASSDSLE 179


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 25.4 bits (53), Expect = 2.4
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 7/45 (15%)
 Frame = -2

Query: 281  FLLKGWSETNPNL---GDACSDLQRILF----SHQILQILQIYCH 168
            F+ KG  E +PN    GDA  D++ +LF    S +I   +Q  CH
Sbjct: 926  FVEKGILEGSPNCPECGDAVEDVEHVLFHCPRSDRIRNEMQQRCH 970


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.0 bits (52), Expect = 3.1
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -3

Query: 154 RRIIAEFVASSKFGTTVSTAIIPVTRHDYFSDLVEDVYLNYGFFLTQ 14
           RR+ A+  A ++F          ++   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 7.3
 Identities = 16/70 (22%), Positives = 26/70 (37%)
 Frame = +1

Query: 226 SEHASPRLGFVSLQPFNKNFYDPHPTVLKRSPYEVEEYRNNHEVTVSGVEVHNPIQYFEE 405
           SE     +   +++P     Y+P P VL  +   V E   + ++ +    V       EE
Sbjct: 97  SEDVESSIPVSTIEPNLVEVYEPPPVVLIDTGNNVVEVNTDDQIVLEDGSVEGESNEQEE 156

Query: 406 ANFPDYVQQG 435
           A    Y   G
Sbjct: 157 AQIDVYHVDG 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 947,121
Number of Sequences: 2352
Number of extensions: 20426
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97574436
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)