Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0215.Seq
         (900 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       24   7.2  
CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein ...    23   9.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   9.6  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 23.8 bits (49), Expect = 7.2
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 184 PVCYEIPTGHIFQCNEGHNVCGR*KFG 264
           P  YE P  ++   N  +  CGR +FG
Sbjct: 383 PPTYEEPFRNVATANHPNATCGRPEFG 409


>CR954257-5|CAJ14156.1|  227|Anopheles gambiae predicted protein
           protein.
          Length = 227

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -2

Query: 812 GNCVTKTICYPGDAAN 765
           G C T  I YPGD  N
Sbjct: 63  GKCSTNEILYPGDHDN 78


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 9.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 752 YKILSENISMVKKNMPHV*NFDC 684
           Y +L  N  ++ K  PH+ + DC
Sbjct: 484 YAVLKNNNRIILKRYPHLDSVDC 506


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 961,182
Number of Sequences: 2352
Number of extensions: 19244
Number of successful extensions: 82
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 82
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 97160985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)