Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0215.Seq
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066301-1|AAH66301.1| 245|Homo sapiens similar to Six transmem... 40 0.016
BC011802-1|AAH11802.1| 339|Homo sapiens six transmembrane epith... 39 0.021
AF186249-1|AAF17479.1| 339|Homo sapiens six transmembrane epith... 39 0.021
AC004969-1|AAD15620.2| 339|Homo sapiens unknown protein. 39 0.021
U76247-1|AAC51907.1| 282|Homo sapiens hSIAH1 protein. 38 0.066
U63295-1|AAC12950.1| 282|Homo sapiens seven in absentia homolog... 38 0.066
EF026094-1|ABK15529.1| 195|Homo sapiens SIAH1 short protein pro... 38 0.066
BX647064-1|CAE46191.1| 282|Homo sapiens hypothetical protein pr... 38 0.066
BC044920-1|AAH44920.1| 282|Homo sapiens SIAH1 protein protein. 38 0.066
BC042550-1|AAH42550.1| 313|Homo sapiens seven in absentia homol... 38 0.066
BC035562-1|AAH35562.1| 282|Homo sapiens seven in absentia homol... 38 0.066
AJ400626-1|CAC35542.1| 282|Homo sapiens SIAH1 protein protein. 38 0.066
AL359734-1|CAI41259.1| 277|Homo sapiens seven in absentia homol... 37 0.11
Y15268-1|CAA75557.1| 324|Homo sapiens Siah2 protein protein. 36 0.15
U76248-1|AAC51908.1| 324|Homo sapiens hSIAH2 protein. 36 0.15
BC013082-1|AAH13082.1| 324|Homo sapiens seven in absentia homol... 36 0.15
AK223565-1|BAD97285.1| 324|Homo sapiens seven in absentia homol... 36 0.15
BC112154-1|AAI12155.1| 487|Homo sapiens tripartite motif protei... 32 3.3
BC112152-1|AAI12153.1| 487|Homo sapiens tripartite motif protei... 32 3.3
>BC066301-1|AAH66301.1| 245|Homo sapiens similar to Six
transmembrane epithelial antigen of prostate protein.
Length = 245
Score = 39.5 bits (88), Expect = 0.016
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -3
Query: 898 CPGFFKDXSQI*PTTHXPINIASXSCXDMVTV*LKPFATQVMQPIATRHTKYYLKI-FQW 722
CP + ++ P H PI IA+ +T L +V+ P+AT H +Y+ KI
Sbjct: 38 CPSELQHAQELFPQWHLPIKIAAVMAS--LTF-LYTLLREVIHPLATSHQQYFYKIPILV 94
Query: 721 LRKICPMFEI-LIAVTNFPRVV 659
+ K+ PM I L+A+ P V+
Sbjct: 95 INKVLPMVSITLLALVYLPGVI 116
>BC011802-1|AAH11802.1| 339|Homo sapiens six transmembrane
epithelial antigen of the prostate 1 protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.021
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -3
Query: 898 CPGFFKDXSQI*PTTHXPINIASXSCXDMVTV*LKPFATQVMQPIATRHTKYYLKI-FQW 722
CP + ++ P H PI IA+ +T L +V+ P+AT H +Y+ KI
Sbjct: 57 CPSELQHTQELFPQWHLPIKIAAIIAS--LTF-LYTLLREVIHPLATSHQQYFYKIPILV 113
Query: 721 LRKICPMFEI-LIAVTNFPRVV 659
+ K+ PM I L+A+ P V+
Sbjct: 114 INKVLPMVSITLLALVYLPGVI 135
>AF186249-1|AAF17479.1| 339|Homo sapiens six transmembrane
epithelial antigen of prostate protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.021
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -3
Query: 898 CPGFFKDXSQI*PTTHXPINIASXSCXDMVTV*LKPFATQVMQPIATRHTKYYLKI-FQW 722
CP + ++ P H PI IA+ +T L +V+ P+AT H +Y+ KI
Sbjct: 57 CPSELQHTQELFPQWHLPIKIAAIIAS--LTF-LYTLLREVIHPLATSHQQYFYKIPILV 113
Query: 721 LRKICPMFEI-LIAVTNFPRVV 659
+ K+ PM I L+A+ P V+
Sbjct: 114 INKVLPMVSITLLALVYLPGVI 135
>AC004969-1|AAD15620.2| 339|Homo sapiens unknown protein.
Length = 339
Score = 39.1 bits (87), Expect = 0.021
Identities = 26/82 (31%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = -3
Query: 898 CPGFFKDXSQI*PTTHXPINIASXSCXDMVTV*LKPFATQVMQPIATRHTKYYLKI-FQW 722
CP + ++ P H PI IA+ +T L +V+ P+AT H +Y+ KI
Sbjct: 57 CPSELQHTQELFPQWHLPIKIAAIIAS--LTF-LYTLLREVIHPLATSHQQYFYKIPILV 113
Query: 721 LRKICPMFEI-LIAVTNFPRVV 659
+ K+ PM I L+A+ P V+
Sbjct: 114 INKVLPMVSITLLALVYLPGVI 135
>U76247-1|AAC51907.1| 282|Homo sapiens hSIAH1 protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>U63295-1|AAC12950.1| 282|Homo sapiens seven in absentia homolog
protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>EF026094-1|ABK15529.1| 195|Homo sapiens SIAH1 short protein
protein.
Length = 195
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>BX647064-1|CAE46191.1| 282|Homo sapiens hypothetical protein
protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>BC044920-1|AAH44920.1| 282|Homo sapiens SIAH1 protein protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>BC042550-1|AAH42550.1| 313|Homo sapiens seven in absentia homolog
1 (Drosophila) protein.
Length = 313
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 65 DLASLFECPVCFDYVLPPILQCQSGHLVC 93
>BC035562-1|AAH35562.1| 282|Homo sapiens seven in absentia homolog
1 (Drosophila) protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>AJ400626-1|CAC35542.1| 282|Homo sapiens SIAH1 protein protein.
Length = 282
Score = 37.5 bits (83), Expect = 0.066
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL +L +CPVC++ I QC GH VC
Sbjct: 34 DLASLFECPVCFDYVLPPILQCQSGHLVC 62
>AL359734-1|CAI41259.1| 277|Homo sapiens seven in absentia homolog
1-like (Drosophila) protein.
Length = 277
Score = 36.7 bits (81), Expect = 0.11
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVC 246
DL ++ QCPVC + I QC GH VC
Sbjct: 29 DLASIFQCPVCLDYALPPILQCERGHLVC 57
>Y15268-1|CAA75557.1| 324|Homo sapiens Siah2 protein protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.15
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGR 252
+L +L +CPVC++ I QC GH VC +
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQ 103
>U76248-1|AAC51908.1| 324|Homo sapiens hSIAH2 protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.15
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGR 252
+L +L +CPVC++ I QC GH VC +
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQ 103
>BC013082-1|AAH13082.1| 324|Homo sapiens seven in absentia homolog
2 (Drosophila) protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.15
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGR 252
+L +L +CPVC++ I QC GH VC +
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQ 103
>AK223565-1|BAD97285.1| 324|Homo sapiens seven in absentia homolog
2 variant protein.
Length = 324
Score = 36.3 bits (80), Expect = 0.15
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 160 DLDNLLQCPVCYEIPTGHIFQCNEGHNVCGR 252
+L +L +CPVC++ I QC GH VC +
Sbjct: 73 ELTSLFECPVCFDYVLPPILQCQAGHLVCNQ 103
>BC112154-1|AAI12155.1| 487|Homo sapiens tripartite motif protein
50A protein.
Length = 487
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 154 LPDLDNLLQCPVCYEI-PTGHIFQCNEGHNVC 246
LP+L++ LQCP+C E+ + QC GH+ C
Sbjct: 7 LPELEDRLQCPICLEVFKEPLMLQC--GHSYC 36
>BC112152-1|AAI12153.1| 487|Homo sapiens tripartite motif protein
50A protein.
Length = 487
Score = 31.9 bits (69), Expect = 3.3
Identities = 14/32 (43%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 154 LPDLDNLLQCPVCYEI-PTGHIFQCNEGHNVC 246
LP+L++ LQCP+C E+ + QC GH+ C
Sbjct: 7 LPELEDRLQCPICLEVFKEPLMLQC--GHSYC 36
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,595,135
Number of Sequences: 237096
Number of extensions: 2955310
Number of successful extensions: 5967
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5961
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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