Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0214.Seq
(886 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 39 0.006
01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242 36 0.033
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 33 0.23
05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118 33 0.40
01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251 33 0.40
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 32 0.53
01_01_0147 - 1332752-1333447,1333557-1333739 31 0.93
05_01_0379 + 2975701-2976831 31 1.6
09_04_0107 - 14640097-14640348,14640472-14640701,14640805-146412... 30 2.1
11_01_0219 - 1710206-1710246,1710479-1710620,1710699-1710752,171... 30 2.8
01_01_0658 - 5017219-5018066,5018572-5019085 30 2.8
06_02_0097 + 11710560-11710859,11712605-11713270 29 3.8
01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,856... 29 5.0
05_01_0380 + 2978256-2979284 29 6.6
02_01_0284 + 1907249-1907665,1907816-1907859,1909508-1909546,190... 29 6.6
11_06_0141 + 20559828-20559986,20560074-20560281,20560375-205604... 28 8.7
07_03_0265 + 15976331-15976645,15977575-15977784,15977869-159779... 28 8.7
02_05_0752 + 31491462-31491921,31492177-31492271,31492346-314925... 28 8.7
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 28 8.7
>02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688
Length = 308
Score = 38.7 bits (86), Expect = 0.006
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 131 IVENKVDELPDLDNLLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
+V ++ L L++LL+CPVC I QC GH +C K
Sbjct: 43 LVTVELSSLTGLNDLLECPVCTNSMRPPILQCPNGHTICSNCK 85
>01_01_0158 + 1374169-1374324,1374464-1375295,1375977-1376242
Length = 417
Score = 36.3 bits (80), Expect = 0.033
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVC 247
+L CPVC++I +FQC+ GH VC
Sbjct: 36 VLHCPVCFQILRPPVFQCDLGHLVC 60
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
LL+CPVC I QC+ GH +C K
Sbjct: 442 LLECPVCLNAMYPPIHQCSNGHTLCSGCK 470
>05_03_0093 + 8340210-8340548,8344290-8344676,8344759-8345118
Length = 361
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
LL+CPVC I QC GH +C K
Sbjct: 97 LLECPVCTNSMFPPIHQCQNGHTLCSTCK 125
>01_01_0947 - 7450144-7450503,7450637-7451023,7451955-7452251
Length = 347
Score = 32.7 bits (71), Expect = 0.40
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLK 259
LL+CPVC I QC GH +C K
Sbjct: 83 LLECPVCTNSMYPPIHQCQNGHTLCSTCK 111
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 32.3 bits (70), Expect = 0.53
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 394 ASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKD 513
+S SSS+ A D G DN E +D +ND S + N KD
Sbjct: 469 SSSSSSSLAMDRGEDNHELPRQDHHNDMATSSESVNQLKD 508
>01_01_0147 - 1332752-1333447,1333557-1333739
Length = 292
Score = 31.5 bits (68), Expect = 0.93
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = +2
Query: 176 LQCPVCYEIPTGHIFQCNEGHNVCG 250
L+CP+C+ ++ C GH CG
Sbjct: 46 LECPICFVPFEDRVYMCKNGHAACG 70
>05_01_0379 + 2975701-2976831
Length = 376
Score = 30.7 bits (66), Expect = 1.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +2
Query: 176 LQCPVCYEIPTGHIFQCNEGHNVC 247
L+C VC+ + IFQC GH VC
Sbjct: 123 LECGVCFLLLRPPIFQCEVGHVVC 146
>09_04_0107 -
14640097-14640348,14640472-14640701,14640805-14641215,
14641481-14643831,14643927-14644093
Length = 1136
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 367 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDE 465
GGK T + AS SSS+P D+ S++ L E
Sbjct: 488 GGKKTTAMAASSSSSSPVHDAESEDENSLDHSE 520
>11_01_0219 -
1710206-1710246,1710479-1710620,1710699-1710752,
1710838-1710909,1711631-1711699,1711807-1711848,
1711946-1712014,1712130-1712267,1712390-1712500,
1712576-1712726,1713720-1713775,1714076-1714753
Length = 540
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 367 GGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQN 483
GG +G + + DS S++ EYL EDE +D+++
Sbjct: 186 GGGAKQGKKKKKTENWMEEDSDSEDEEYLDEDEEDDDEH 224
>01_01_0658 - 5017219-5018066,5018572-5019085
Length = 453
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -2
Query: 681 FPKSWWRSAHALKVFNAFCSSL*K 610
+P+S WR A AL V + FC SL K
Sbjct: 154 WPQSCWRKAEALPVISHFCHSLLK 177
>06_02_0097 + 11710560-11710859,11712605-11713270
Length = 321
Score = 29.5 bits (63), Expect = 3.8
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +2
Query: 170 NLLQCPVCYEIPTGHIFQCNEGHNVC 247
++L C +C+E ++QC GH C
Sbjct: 83 DVLDCSICFESLRPPLYQCQNGHVAC 108
>01_01_1089 - 8560008-8560220,8560456-8560977,8561095-8561283,
8561377-8561642,8561967-8562111,8562411-8562530,
8562611-8562930,8564161-8564341,8564434-8564580,
8565186-8565497,8566303-8566450,8566592-8566765,
8567385-8567446,8567499-8567571,8567628-8567683,
8568370-8568645,8569541-8569588,8569870-8569991,
8570258-8570413,8571037-8571079,8572624-8572701,
8572972-8573070,8573168-8573209,8573302-8573304
Length = 1264
Score = 29.1 bits (62), Expect = 5.0
Identities = 12/20 (60%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 493 APNP-CKDFFVASGCKNGNS 549
AP P CK F GC+NGNS
Sbjct: 1008 APRPICKFFLTLQGCRNGNS 1027
>05_01_0380 + 2978256-2979284
Length = 342
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +2
Query: 176 LQCPVCYEIPTGHIFQCNEGHNVC 247
L+C VC+ IFQC GH VC
Sbjct: 73 LECGVCFLPLRPPIFQCEVGHVVC 96
>02_01_0284 +
1907249-1907665,1907816-1907859,1909508-1909546,
1909791-1910112,1910803-1910892,1911541-1911609,
1911969-1912074,1912146-1912234,1912349-1912461,
1912555-1912657
Length = 463
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/64 (26%), Positives = 28/64 (43%)
Frame = +1
Query: 298 FGTRNYAMEELIANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDN 477
F T Y + + R+F + G +SDS+S+P+ + SD E G+ N N
Sbjct: 208 FTTMAYPVSPIAGRRSNWRSFAASLNLEDGPASSDSTSSPSEQT-SDGGEVYGDPSENLN 266
Query: 478 QNSV 489
+
Sbjct: 267 SRKL 270
>11_06_0141 +
20559828-20559986,20560074-20560281,20560375-20560433,
20560532-20560590,20560809-20560886,20560974-20561073,
20561174-20561245,20561327-20561434,20561677-20561730,
20562847-20563296
Length = 448
Score = 28.3 bits (60), Expect = 8.7
Identities = 24/83 (28%), Positives = 37/83 (44%)
Frame = +1
Query: 334 ANVRKLRAFKLGGKVTRGLLASDSSSTPARDSGSDNAEYLGEDENNDNQNSVVAPNPCKD 513
A K+ A GKV + S S+S PAR + + A + + D + +V PN +
Sbjct: 63 ARKAKVAAAVANGKVGKKPALSQSASFPARGAAAKKAATPKQAKTTDGKGAV--PNGSEK 120
Query: 514 FFVASGCKNGNSIRLPGSSFT*P 582
+ K NS R P +S + P
Sbjct: 121 AAGRAVEKKVNSARTPAASRSLP 143
>07_03_0265 +
15976331-15976645,15977575-15977784,15977869-15977916,
15978307-15978675,15978736-15978747,15978763-15978870,
15979156-15979493,15980313-15980430,15983247-15984107,
15984457-15984750
Length = 890
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 319 MEELIANVRKLRAFKLGGKVTRGLLASDSSSTPAR 423
+EE+ NV RAF LG KV + LLA S A+
Sbjct: 852 LEEVKINVDCTRAFSLGSKVLKKLLALPRVSDKAK 886
>02_05_0752 +
31491462-31491921,31492177-31492271,31492346-31492573,
31493070-31493157,31493275-31493326,31493985-31494050,
31494382-31494536,31494633-31494703,31494820-31495017,
31495103-31495144,31496223-31496324,31496514-31496603,
31496708-31496783,31497299-31497395,31497488-31497557,
31497676-31497852,31498156-31498239,31498971-31499093,
31500143-31500226,31500318-31500502,31500592-31500730,
31500841-31500900,31500969-31501040,31501136-31501197,
31501839-31501945,31501984-31502058,31502800-31503248
Length = 1168
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -2
Query: 558 KSDGIPILAARGNEKVLTWVRGHY 487
KSDG+ +L + EKV+ W R HY
Sbjct: 565 KSDGV-VLTRQKAEKVVGWARSHY 587
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 173 LLQCPVCYEIPTGHIFQCNEGHNVCGRLKFG 265
LL C C + +F+C+E H VC + G
Sbjct: 390 LLHCHACLQPLKPPVFKCDEAHIVCSGCRCG 420
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,339,614
Number of Sequences: 37544
Number of extensions: 446056
Number of successful extensions: 1169
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1168
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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