Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0212.Seq
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28 pro... 76 7e-14
CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein. 76 7e-14
BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28 p... 76 7e-14
BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28 p... 76 7e-14
BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28 p... 76 7e-14
AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28 v... 76 9e-14
AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28 p... 48 2e-05
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein. 30 5.7
X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein. 30 5.7
AY358719-1|AAQ89081.1| 251|Homo sapiens metastasis-associated p... 29 7.6
AK055031-1|BAB70840.1| 208|Homo sapiens protein ( Homo sapiens ... 29 7.6
Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase prot... 29 10.0
X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligas... 29 10.0
S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase prot... 29 10.0
BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein pr... 29 10.0
BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein. 29 10.0
BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein. 29 10.0
BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein. 29 10.0
BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0
BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0
BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0
BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0
AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing ... 29 10.0
AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase pr... 29 10.0
AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase pr... 29 10.0
AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein pr... 29 10.0
AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligas... 29 10.0
>U14969-1|AAA85657.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +3
Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 234 GFTVVYKKQRLPESP 278
G VV K++ P
Sbjct: 59 GVVVVIKRRSGQRKP 73
Score = 57.2 bits (132), Expect = 3e-08
Identities = 25/67 (37%), Positives = 41/67 (61%)
Frame = +2
Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409
+G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 410 LRSQRPI 430
LR+Q+P+
Sbjct: 118 LRTQKPV 124
>CR457024-1|CAG33305.1| 137|Homo sapiens RPL28 protein.
Length = 137
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +3
Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 234 GFTVVYKKQRLPESP 278
G VV K++ P
Sbjct: 59 GVVVVIKRRSGQRKP 73
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409
+G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 410 LRSQRPI 430
LRSQ+P+
Sbjct: 118 LRSQKPV 124
>BC011582-1|AAH11582.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +3
Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 234 GFTVVYKKQRLPESP 278
G VV K++ P
Sbjct: 59 GVVVVIKRRSGQRKP 73
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409
+G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 410 LRSQRPI 430
LRSQ+P+
Sbjct: 118 LRSQKPV 124
>BC010182-1|AAH10182.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +3
Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 234 GFTVVYKKQRLPESP 278
G VV K++ P
Sbjct: 59 GVVVVIKRRSGQRKP 73
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409
+G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINRNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 410 LRSQRPI 430
LRSQ+P+
Sbjct: 118 LRSQKPV 124
>BC010173-1|AAH10173.1| 137|Homo sapiens ribosomal protein L28
protein.
Length = 137
Score = 76.2 bits (179), Expect = 7e-14
Identities = 36/75 (48%), Positives = 50/75 (66%)
Frame = +3
Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 234 GFTVVYKKQRLPESP 278
G VV K++ P
Sbjct: 59 GVVVVIKRRSGQRKP 73
Score = 58.4 bits (135), Expect = 1e-08
Identities = 26/67 (38%), Positives = 41/67 (61%)
Frame = +2
Query: 230 EGIHSSVQEAKATRKPAKNLIRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAI 409
+G+ ++ RKPA + +R AR +L ++ +++ N YR DL A +RRASAI
Sbjct: 58 KGVVVVIKRRSGQRKPATSYVRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAI 117
Query: 410 LRSQRPI 430
LRSQ+P+
Sbjct: 118 LRSQKPV 124
>AB209627-1|BAD92864.1| 95|Homo sapiens ribosomal protein L28
variant protein.
Length = 95
Score = 75.8 bits (178), Expect = 9e-14
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +3
Query: 54 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 233
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 9 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66
Query: 234 GFTVVYKKQ 260
G VV K++
Sbjct: 67 GVVVVIKRR 75
>AB007179-1|BAA25838.1| 53|Homo sapiens ribosomal protein L28
protein.
Length = 53
Score = 48.4 bits (110), Expect = 2e-05
Identities = 21/47 (44%), Positives = 31/47 (65%)
Frame = +2
Query: 290 IRRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQRPI 430
+R AR +L ++ +++ N YR DL A +RRASAILRSQ+P+
Sbjct: 4 VRTTINKNARATLSSIRHMIRKNKYRPDLRMAAIRRASAILRSQKPV 50
>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
Length = 3925
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 86 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSSVQEAKA 265
++ C + + ++AV + +E CD PP++ + + S + G P EG SS
Sbjct: 3684 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSSTALFPQ 3743
Query: 266 TRK 274
T K
Sbjct: 3744 THK 3746
>X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein.
Length = 1872
Score = 29.9 bits (64), Expect = 5.7
Identities = 17/63 (26%), Positives = 30/63 (47%)
Frame = +2
Query: 86 QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSSVQEAKA 265
++ C + + ++AV + +E CD PP++ + + S + G P EG SS
Sbjct: 1599 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSSTALFPQ 1658
Query: 266 TRK 274
T K
Sbjct: 1659 THK 1661
>AY358719-1|AAQ89081.1| 251|Homo sapiens metastasis-associated
protein protein.
Length = 251
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 316 GTSLEWTA-D*VFSGLSGSLCFLYTTVNPFLSGFSTTPTAFL*IKPLYLKEWRLVTL 149
GT+ WTA D S G LC + PF S +TTP L + L L LV L
Sbjct: 193 GTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLALLLPVLLLVGL 249
>AK055031-1|BAB70840.1| 208|Homo sapiens protein ( Homo sapiens
cDNA FLJ30469 fis, clone BRAWH1000037, weakly similar to
UROKINASE PLASMINOGEN ACTIVATOR SURFACE RECEPTOR
PRECURSOR. ).
Length = 208
Score = 29.5 bits (63), Expect = 7.6
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -1
Query: 316 GTSLEWTA-D*VFSGLSGSLCFLYTTVNPFLSGFSTTPTAFL*IKPLYLKEWRLVTL 149
GT+ WTA D S G LC + PF S +TTP L + L L LV L
Sbjct: 150 GTTSPWTAIDLQGSCCEGYLCNRKSMTQPFTSASATTPPRALQVLALLLPVLLLVGL 206
>Y00387-1|CAA68457.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>X59834-1|CAA42495.1| 373|Homo sapiens glutamate--ammonia ligase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>S70290-1|AAB30693.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BX537384-1|CAD97626.1| 373|Homo sapiens hypothetical protein
protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC127883-1|AAI27884.1| 258|Homo sapiens GLUL protein protein.
Length = 258
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 44 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 75
>BC051726-1|AAH51726.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC031964-1|AAH31964.1| 373|Homo sapiens GLUL protein protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC018992-1|AAH18992.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011852-1|AAH11852.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC011700-1|AAH11700.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>BC010037-1|AAH10037.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY513283-1|AAT08036.1| 233|Homo sapiens proliferation-inducing
protein 43 protein.
Length = 233
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486123-1|AAS57905.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AY486122-1|AAS57904.1| 373|Homo sapiens glutamine synthetase
protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL161952-1|CAB82304.1| 112|Homo sapiens hypothetical protein
protein.
Length = 112
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
>AL139344-1|CAI19842.1| 373|Homo sapiens glutamate-ammonia ligase
(glutamine synthetase) protein.
Length = 373
Score = 29.1 bits (62), Expect = 10.0
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 87 NNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYN 182
N++ +LV + PF K+PN + F+YN
Sbjct: 74 NSDMYLVPAAMFRDPFRKDPNKLVLCEVFKYN 105
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,357,325
Number of Sequences: 237096
Number of extensions: 1583001
Number of successful extensions: 9968
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 9900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9962
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -