Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0212.Seq
(526 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L10433-1|AAA27732.1| 149|Apis mellifera transposase protein. 25 0.63
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 23 2.5
M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee homeobox-... 22 3.3
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 3.3
AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase pr... 22 4.4
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 21 5.8
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 21 5.8
M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee homeobox-... 21 7.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.7
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 21 7.7
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 21 7.7
>L10433-1|AAA27732.1| 149|Apis mellifera transposase protein.
Length = 149
Score = 24.6 bits (51), Expect = 0.63
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +3
Query: 84 RNNNAFLVKKRNIKKPFSKEP 146
R N+ L+KKRN PF K P
Sbjct: 8 RINSCDLLKKRNENDPFLKRP 28
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 274 LSGSLCFLYTTVNPFL 227
LSG L + TT+NP L
Sbjct: 312 LSGCLYYFSTTINPIL 327
>M29490-1|AAA27725.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E30. ).
Length = 109
Score = 22.2 bits (45), Expect = 3.3
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 293 RRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQ 421
+RP A + L ++KR N Y T+ + L R + +Q
Sbjct: 21 KRPRTAFSAEQLARLKREFAENRYLTERRRQQLSRDLGLTEAQ 63
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -1
Query: 286 VFSGLSGSLCFLYTTVNPFL 227
+ + +SG +L TTVNP L
Sbjct: 328 ILTYMSGVFYYLSTTVNPLL 347
>AY155490-1|AAO12861.1| 342|Apis mellifera Ammar1 transposase
protein.
Length = 342
Score = 21.8 bits (44), Expect = 4.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = +3
Query: 84 RNNNAFLVKKRNIKKPFSK 140
R N+ L+KKRN PF K
Sbjct: 129 RINSCDLLKKRNENDPFLK 147
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 21.4 bits (43), Expect = 5.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 274 LSGSLCFLYTTVNPFL 227
L+G L + TT+NP L
Sbjct: 300 LTGCLYYFSTTINPIL 315
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 21.4 bits (43), Expect = 5.8
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = -3
Query: 197 LVNQAVVPEGVEVSHIVRLLAERLFDIALLHKECIV 90
L+N A + V + + L +++FDI LL C++
Sbjct: 88 LINNATINIDVTLQNDEVLDWKKIFDINLLGLTCMI 123
>M29489-1|AAA27724.1| 109|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone E60. ).
Length = 109
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 293 RRPFKAGARRSLYKVKRLLKANHYRTDLCKATLRRASAILRSQ 421
+RP A + L ++KR N Y T+ + L R + +Q
Sbjct: 21 KRPRTAFSGEQLARLKREFAENRYLTERRRQQLSRDLGLNEAQ 63
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.7
Identities = 15/54 (27%), Positives = 23/54 (42%)
Frame = +3
Query: 51 KMSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 212
K+ SSL+ I NNN + N + NN N Y +I+ + + V
Sbjct: 313 KIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNNCKKLYYNIINIEQIPV 366
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 11 EHVVFGVEIGLNRKNVVVTEL 73
+ V G +G N KNV V EL
Sbjct: 243 QEAVPGDNVGFNVKNVSVKEL 263
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 7.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +2
Query: 11 EHVVFGVEIGLNRKNVVVTEL 73
+ V G +G N KNV V EL
Sbjct: 300 QEAVPGDNVGFNVKNVSVKEL 320
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,245
Number of Sequences: 438
Number of extensions: 2478
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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