Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0211.Seq
(730 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 159 3e-41
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 154 9e-40
EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor 1-a... 82 6e-18
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 37 2e-04
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 24 1.7
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 24 1.7
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 24 1.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.2
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 23 2.9
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 159 bits (385), Expect = 3e-41
Identities = 96/159 (60%), Positives = 108/159 (67%), Gaps = 5/159 (3%)
Frame = -3
Query: 725 QEAVPGDNVSFNVK----KRVRQGIASWLCCW*LPKXTHLRVLTDFTAQVIDX*PSWSNL 558
QEAVPGDNV FNVK K +R+G + PK DFTAQVI +
Sbjct: 300 QEAVPGDNVGFNVKNVSVKELRRGYVAGDSKNNPPKGA-----ADFTAQVIVLNHP-GQI 353
Query: 557 KRLHTSLGLPHCPH-CLQFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVE 381
+T + H H +FA+IKEK DRR GK+TE NPKSIKSGDAAIV LVPSKP+C E
Sbjct: 354 SNGYTPVLDCHTAHIACKFADIKEKCDRRNGKTTEENPKSIKSGDAAIVMLVPSKPMCAE 413
Query: 380 SFQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
+FQEFPPLGRFAVRDMRQTVAVGVIKAV FK+A GKVT
Sbjct: 414 AFQEFPPLGRFAVRDMRQTVAVGVIKAVTFKDA-AGKVT 451
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 154 bits (373), Expect = 9e-40
Identities = 93/158 (58%), Positives = 107/158 (67%), Gaps = 5/158 (3%)
Frame = -3
Query: 722 EAVPGDNVSFNVK----KRVRQGIASWLCCW*LPKXTHLRVLTDFTAQVIDX*PSWSNLK 555
EA+PGDNV FNVK K +R+G + K R DFTAQVI +
Sbjct: 301 EALPGDNVGFNVKNISVKELRRGYVAGDS-----KNQPPRGAADFTAQVIVLNHP-GQIS 354
Query: 554 RLHTSLGLPHCPH-CLQFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSKPLCVES 378
+T + H H +FAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+KP+CVE+
Sbjct: 355 NGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTKPMCVEA 414
Query: 377 FQEFPPLGRFAVRDMRQTVAVGVIKAVNFKEAGGGKVT 264
FQEFPPLGRFAVRDMRQTVAVGVIK+V FK+ GKVT
Sbjct: 415 FQEFPPLGRFAVRDMRQTVAVGVIKSVTFKDT-QGKVT 451
>EF013227-1|ABK54581.1| 119|Apis mellifera elongation factor
1-alpha protein.
Length = 119
Score = 81.8 bits (193), Expect = 6e-18
Identities = 57/114 (50%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Frame = -3
Query: 722 EAVPGDNVSFNVK----KRVRQGIASWLCCW*LPKXTHLRVLTDFTAQVIDX*PSWSNLK 555
EA+PGDNV FNVK K +R+G + K R DFTAQVI +
Sbjct: 12 EALPGDNVGFNVKNISVKELRRGYVAGDS-----KNQPPRGAADFTAQVIVLNHP-GQIS 65
Query: 554 RLHTSLGLPHCPH-CLQFAEIKEKVDRRTGKSTEVNPKSIKSGDAAIVNLVPSK 396
+T + H H +FAEIKEK DRRTGK+TE NPKSIKSGDAAIV L P+K
Sbjct: 66 NGYTPVLDCHTAHIACKFAEIKEKCDRRTGKTTEENPKSIKSGDAAIVMLQPTK 119
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 37.1 bits (82), Expect = 2e-04
Identities = 16/18 (88%), Positives = 18/18 (100%)
Frame = -1
Query: 685 RNVSVKELRRGYVAGDSQ 632
+NVSVKELRRGYVAGDS+
Sbjct: 256 KNVSVKELRRGYVAGDSK 273
Score = 31.9 bits (69), Expect = 0.006
Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -3
Query: 725 QEAVPGDNVSFNVK----KRVRQG 666
QEAVPGDNV FNVK K +R+G
Sbjct: 243 QEAVPGDNVGFNVKNVSVKELRRG 266
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KYRSCMKNCAVNSSSYFLPLVAF 253
K+ C+KN A SSYF+ + F
Sbjct: 94 KFYDCLKNSADTISSYFVGKMYF 116
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KYRSCMKNCAVNSSSYFLPLVAF 253
K+ C+KN A SSYF+ + F
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYF 121
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 185 KYRSCMKNCAVNSSSYFLPLVAF 253
K+ C+KN A SSYF+ + F
Sbjct: 99 KFYDCLKNSADTISSYFVGKMYF 121
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 146 CSPFFLRNTFR*MKYRSCMKN 208
C FF R+ + ++YR C KN
Sbjct: 87 CKGFFRRSIQQKIQYRPCTKN 107
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 23.0 bits (47), Expect = 2.9
Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -3
Query: 554 RLHTSLGLPHCPHC-LQFAEI 495
RLHT HC HC QF ++
Sbjct: 30 RLHTGEKPYHCSHCDRQFVQV 50
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,282
Number of Sequences: 438
Number of extensions: 3982
Number of successful extensions: 24
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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