Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0208.Seq
(887 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 71 4e-11
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 58 4e-07
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 58 4e-07
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 58 4e-07
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 58 4e-07
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 51 3e-05
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.11
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 39 0.20
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 38 0.26
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.60
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 37 0.79
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 35 2.4
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 33 9.7
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 70.9 bits (166), Expect = 4e-11
Identities = 32/34 (94%), Positives = 32/34 (94%)
Frame = -1
Query: 695 FSPTFAGFPRQALNRGLPLGFRFSALRHLDPKKL 594
F TFAGFPRQALNRGLPLGFRFSALRHLDPKKL
Sbjct: 39 FLATFAGFPRQALNRGLPLGFRFSALRHLDPKKL 72
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 255 LAAHPPFASWXNSEEARTDRPSQQLR 332
LAAHPPFASW NSEEARTDRPSQQLR
Sbjct: 88 LAAHPPFASWRNSEEARTDRPSQQLR 113
Score = 48.8 bits (111), Expect = 2e-04
Identities = 29/55 (52%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Frame = +1
Query: 196 LAVVLQRRDWENPGVTQLNRL-QHIPLSP--AGVIAKRPAPIALPNSCAXEWRMA 351
LAVVLQRRDWENPGVTQLNRL H P + A+ P EWR A
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 255 LAAHPPFASWXNSEEARTDRPSQQLR 332
LAAHPPFASW NSEEARTDRPSQQLR
Sbjct: 42 LAAHPPFASWRNSEEARTDRPSQQLR 67
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +1
Query: 196 LAVVLQRRDWENPGVTQLNRLQHIP 270
LAVVLQRRDWENPGVTQLNRL P
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHP 46
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 255 LAAHPPFASWXNSEEARTDRPSQQLR 332
LAAHPPFASW NSEEARTDRPSQQLR
Sbjct: 46 LAAHPPFASWRNSEEARTDRPSQQLR 71
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/55 (54%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +1
Query: 196 LAVVLQRRDWENPGVTQLNRL-QHIPLSP--AGVIAKRPAPIALPNSCAXEWRMA 351
LAVVLQRRDWENPGVTQLNRL H P + A+ P S EWR A
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 57.6 bits (133), Expect = 4e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +3
Query: 255 LAAHPPFASWXNSEEARTDRPSQQLR 332
LAAHPPFASW NSEEARTDRPSQQLR
Sbjct: 28 LAAHPPFASWRNSEEARTDRPSQQLR 53
Score = 50.8 bits (116), Expect = 5e-05
Identities = 30/55 (54%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Frame = +1
Query: 196 LAVVLQRRDWENPGVTQLNRL-QHIPLSP--AGVIAKRPAPIALPNSCAXEWRMA 351
LAVVLQRRDWENPGVTQLNRL H P + A+ P S EWR A
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 51.2 bits (117), Expect = 3e-05
Identities = 22/26 (84%), Positives = 22/26 (84%)
Frame = +2
Query: 194 HWPSFYNVVTGKTLALPNLIACSTSP 271
HWPSFYNVVTGKTLALPNLIA P
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIP 30
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.11
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -1
Query: 353 FAIRHSXAQLLGRAIGAGLFAITPAGERG 267
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 38.7 bits (86), Expect = 0.20
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +1
Query: 199 AVVLQRRDWENPGVTQLNRLQHIPLSPAGVIAKRPAPIALPNSCAXEW 342
A L+RR+ +NPG QLN L+ +PL P G K+ AP PN + W
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKK-AP---PNRLSKNW 100
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 38.3 bits (85), Expect = 0.26
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +3
Query: 282 WXNSEEARTDRPSQQLR 332
W NSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 37.1 bits (82), Expect = 0.60
Identities = 15/27 (55%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 196 LAVVLQRRDWENPGVTQLNRL-QHIPL 273
LA +L R DW+NP +T +NRL H PL
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPL 44
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 36.7 bits (81), Expect = 0.79
Identities = 15/24 (62%), Positives = 17/24 (70%)
Frame = +3
Query: 255 LAAHPPFASWXNSEEARTDRPSQQ 326
L AHPPF SW + E A+ DRPS Q
Sbjct: 35 LEAHPPFHSWRDVESAQKDRPSPQ 58
Score = 35.1 bits (77), Expect = 2.4
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = +1
Query: 196 LAVVLQRRDWENPGVTQLNRLQHIP 270
L +L RRDWENP +TQ +RL+ P
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHP 39
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 35.1 bits (77), Expect = 2.4
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 146 GGARYPIRPIVSRIT 190
GGARYPIRPIVSRIT
Sbjct: 261 GGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 33.1 bits (72), Expect = 9.7
Identities = 14/24 (58%), Positives = 18/24 (75%), Gaps = 1/24 (4%)
Frame = +1
Query: 205 VLQRRDWENPGVTQLNRL-QHIPL 273
VL+R+DWENP V+ NRL H P+
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTPM 32
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,057,459
Number of Sequences: 1657284
Number of extensions: 15544793
Number of successful extensions: 34220
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 32764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34192
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79932179145
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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