Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0208.Seq
         (887 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022775-1|AAY55191.1|  636|Drosophila melanogaster IP13956p pro...    29   8.6  
BT022767-1|AAY55183.1|  636|Drosophila melanogaster IP13856p pro...    29   8.6  
AE014296-3276|AAF49071.1|  636|Drosophila melanogaster CG7385-PA...    29   8.6  

>BT022775-1|AAY55191.1|  636|Drosophila melanogaster IP13956p
           protein.
          Length = 636

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 27/91 (29%), Positives = 44/91 (48%)
 Frame = -3

Query: 510 YGLLFQTGTTLNPISVYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTICHSPFXC 331
           YG L + G+TL+PI+    D   +L  + +W+   ++   + AN    LTL+    P+  
Sbjct: 253 YGALMKQGSTLSPIA----DSTRLL-FATWWIFITILTSFYTANLTAFLTLSKFTLPYN- 306

Query: 330 ATVGKGDRCGPLRYYXSWRKGDVLQAIKLGN 238
            TV   D     +++ S R G V  AI+  N
Sbjct: 307 -TV--NDILTKNKHFVSMRGGGVEYAIRTTN 334


>BT022767-1|AAY55183.1|  636|Drosophila melanogaster IP13856p
           protein.
          Length = 636

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 27/91 (29%), Positives = 44/91 (48%)
 Frame = -3

Query: 510 YGLLFQTGTTLNPISVYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTICHSPFXC 331
           YG L + G+TL+PI+    D   +L  + +W+   ++   + AN    LTL+    P+  
Sbjct: 253 YGALMKQGSTLSPIA----DSTRLL-FATWWIFITILTSFYTANLTAFLTLSKFTLPYN- 306

Query: 330 ATVGKGDRCGPLRYYXSWRKGDVLQAIKLGN 238
            TV   D     +++ S R G V  AI+  N
Sbjct: 307 -TV--NDILTKNKHFVSMRGGGVEYAIRTTN 334


>AE014296-3276|AAF49071.1|  636|Drosophila melanogaster CG7385-PA
           protein.
          Length = 636

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 27/91 (29%), Positives = 44/91 (48%)
 Frame = -3

Query: 510 YGLLFQTGTTLNPISVYSFDL*GILPISAYWLKNELI*QKFNANFNKILTLTICHSPFXC 331
           YG L + G+TL+PI+    D   +L  + +W+   ++   + AN    LTL+    P+  
Sbjct: 253 YGALMKQGSTLSPIA----DSTRLL-FATWWIFITILTSFYTANLTAFLTLSKFTLPYN- 306

Query: 330 ATVGKGDRCGPLRYYXSWRKGDVLQAIKLGN 238
            TV   D     +++ S R G V  AI+  N
Sbjct: 307 -TV--NDILTKNKHFVSMRGGGVEYAIRTTN 334


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,038,414
Number of Sequences: 53049
Number of extensions: 725053
Number of successful extensions: 1731
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1731
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4332305172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)