Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0208.Seq
         (887 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr...    31   0.83 
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p...    31   0.83 
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr...    31   0.83 
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ...    31   0.83 
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ...    31   0.83 
Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical pr...    30   1.9  
U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical pr...    29   4.4  
L13200-2|ABE73330.1|  810|Caenorhabditis elegans Hypothetical pr...    29   4.4  
L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical pr...    29   4.4  
U97015-3|AAB52343.1|  124|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 425 AEIGKIPYKSKE*TEIGLSVVPVWNKSPY*RTWTPTSKGEK 547
           A++ K+P K+ +  EI  +  P    +P+  T TP S+GEK
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEK 870


>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 425 AEIGKIPYKSKE*TEIGLSVVPVWNKSPY*RTWTPTSKGEK 547
           A++ K+P K+ +  EI  +  P    +P+  T TP S+GEK
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEK 870


>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 425 AEIGKIPYKSKE*TEIGLSVVPVWNKSPY*RTWTPTSKGEK 547
           A++ K+P K+ +  EI  +  P    +P+  T TP S+GEK
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEK 870


>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 425 AEIGKIPYKSKE*TEIGLSVVPVWNKSPY*RTWTPTSKGEK 547
           A++ K+P K+ +  EI  +  P    +P+  T TP S+GEK
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEK 870


>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
           protein T06D8.1b protein.
          Length = 3653

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 425 AEIGKIPYKSKE*TEIGLSVVPVWNKSPY*RTWTPTSKGEK 547
           A++ K+P K+ +  EI  +  P    +P+  T TP S+GEK
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEK 870


>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
           protein T06D8.1a protein.
          Length = 3719

 Score = 31.5 bits (68), Expect = 0.83
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +2

Query: 425 AEIGKIPYKSKE*TEIGLSVVPVWNKSPY*RTWTPTSKGEK 547
           A++ K+P K+ +  EI  +  P    +P+  T TP S+GEK
Sbjct: 830 ADLPKVPSKTNDDNEITTTSAPAAVTNPWGETETPLSEGEK 870


>Z82076-4|CAB04937.2|  438|Caenorhabditis elegans Hypothetical
           protein W07G1.5a protein.
          Length = 438

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
 Frame = -2

Query: 226 PSHDVVKRRPVNCNTTHYRANWVPGPPSIEVKQEXXXXXXKRDSEA-PAEADATMDTSES 50
           P+  VV  RP         AN  P P S E +++        D E    E DA  D +E 
Sbjct: 318 PTPPVVASRPATAKAPGTPANRQPTPESSEEEEDEGNGDEDDDEEVEDDEEDAGSDEAEE 377

Query: 49  PETAEQPADDSVRKKK 2
             + E+  D+   +++
Sbjct: 378 EPSDEEEEDEETEEEE 393


>U51998-7|AAA96080.2|  769|Caenorhabditis elegans Hypothetical
           protein C12D12.1a protein.
          Length = 769

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 140 YGGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPNLIACSTSP 271
           Y GGA  P   +++  T   P+FY V T  T++ P  +   T+P
Sbjct: 448 YEGGANKPT-VVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTP 490


>U51998-6|ABS83845.1|  825|Caenorhabditis elegans Hypothetical
           protein C12D12.1c protein.
          Length = 825

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 140 YGGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPNLIACSTSP 271
           Y GGA  P   +++  T   P+FY V T  T++ P  +   T+P
Sbjct: 448 YEGGANKPT-VVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTP 490


>U51998-5|AAL00856.2|  648|Caenorhabditis elegans Hypothetical
           protein C12D12.1b protein.
          Length = 648

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = +2

Query: 140 YGGGARYPIRPIVSRITIHWPSFYNVVTGKTLALPNLIACSTSP 271
           Y GGA  P   +++  T   P+FY V T  T++ P  +   T+P
Sbjct: 448 YEGGANKPT-VVLAPPTTPGPTFYPVTTVSTMSPPTTVTVPTTP 490


>L13200-2|ABE73330.1|  810|Caenorhabditis elegans Hypothetical
           protein ZK1236.3b protein.
          Length = 810

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 226 ENPGVTQLNRLQHIPLSPAGVIAKRPAPIALP 321
           E  G ++L R  + P++PA V+ K   P+ALP
Sbjct: 226 EPAGPSELMRAINAPVAPAPVVIKIETPVALP 257


>L13200-1|AAA28193.1| 1000|Caenorhabditis elegans Hypothetical
           protein ZK1236.3a protein.
          Length = 1000

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = +1

Query: 226 ENPGVTQLNRLQHIPLSPAGVIAKRPAPIALP 321
           E  G ++L R  + P++PA V+ K   P+ALP
Sbjct: 416 EPAGPSELMRAINAPVAPAPVVIKIETPVALP 447


>U97015-3|AAB52343.1|  124|Caenorhabditis elegans Hypothetical
           protein F48C1.5 protein.
          Length = 124

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 14/59 (23%), Positives = 26/59 (44%)
 Frame = -2

Query: 178 HYRANWVPGPPSIEVKQEXXXXXXKRDSEAPAEADATMDTSESPETAEQPADDSVRKKK 2
           H   N++P P     K+        +   + +E+D  ++ +  P T+ Q    S RKK+
Sbjct: 62  HLEKNYIPKPKETTKKRRAGEAGGVKREHSTSESDDQLEDANQPSTSSQ--QSSSRKKQ 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,097,387
Number of Sequences: 27780
Number of extensions: 356718
Number of successful extensions: 815
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 762
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2244863852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)