Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0207.Seq
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n... 70 6e-11
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ... 48 2e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 46 6e-04
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 40 0.054
UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3; ... 38 0.29
UniRef50_Q5FSR0 Cluster: Phosphoenolpyruvate-protein phosphotran... 33 4.7
UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT t... 33 6.2
UniRef50_Q0SK29 Cluster: ABC transporter, subtrate-binding compo... 33 8.2
>UniRef50_UPI0000ECD483 Cluster: UPI0000ECD483 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECD483 UniRef100 entry -
Gallus gallus
Length = 103
Score = 69.7 bits (163), Expect = 6e-11
Identities = 36/46 (78%), Positives = 38/46 (82%)
Frame = +1
Query: 256 TAAAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG 393
TAAAGTRLALQ LVK FKV SF+L+GL RV Y YFSSLPPR GSG
Sbjct: 58 TAAAGTRLALQWILVKGFKVDSFQLQGLERVLYCYFSSLPPRVGSG 103
>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
LRRG00114 - Rattus norvegicus (Rat)
Length = 223
Score = 48.0 bits (109), Expect = 2e-04
Identities = 22/23 (95%), Positives = 22/23 (95%)
Frame = +1
Query: 406 LLPSLDVVAVSQAPSPESNPDSP 474
LLPSLDVVAVSQAPSPE NPDSP
Sbjct: 167 LLPSLDVVAVSQAPSPELNPDSP 189
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 46.4 bits (105), Expect = 6e-04
Identities = 34/80 (42%), Positives = 43/80 (53%)
Frame = +1
Query: 256 TAAAGTRLALQLFLVKIFKVYSFRLRGLVRVPYRYFSSLPPRAGSG*XARLLPSLDVVAV 435
TAAAGTRLALQL K+ + + + PY S L L++ A+
Sbjct: 328 TAAAGTRLALQLIFGKVLSSHHSNYKTKIW-PYIVIS-----------CHYLSYLEL-AI 374
Query: 436 SQAPSPESNPDSPLPVTTMV 495
SQAPSPESN +SPLPV M+
Sbjct: 375 SQAPSPESNSNSPLPVKAML 394
Score = 40.7 bits (91), Expect = 0.031
Identities = 25/54 (46%), Positives = 28/54 (51%)
Frame = +2
Query: 215 LTATILVYAIGAGIPRLLAPDLPSNCSSLKYLKCTHSDYEAS*ESRIVIFRHYL 376
LTATIL+YAIGAGI L K L HS+Y+ IVI HYL
Sbjct: 314 LTATILIYAIGAGITAAAGTRLALQLIFGKVLSSHHSNYKTKIWPYIVISCHYL 367
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 39.9 bits (89), Expect = 0.054
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +3
Query: 336 PRKSPVSLFFVTTSPCREW 392
PRKSPV LFFVTTSP REW
Sbjct: 24 PRKSPVLLFFVTTSPGREW 42
>UniRef50_A2GSA9 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 76
Score = 37.5 bits (83), Expect = 0.29
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +1
Query: 373 PPRAGSG*XARLLPSLDVVAVSQAPSP 453
PP+ SG +RLL +D+VA+SQAPSP
Sbjct: 46 PPKVSSGKVSRLLLPVDIVAISQAPSP 72
>UniRef50_Q5FSR0 Cluster: Phosphoenolpyruvate-protein
phosphotransferase; n=1; Gluconobacter oxydans|Rep:
Phosphoenolpyruvate-protein phosphotransferase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 589
Score = 33.5 bits (73), Expect = 4.7
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Frame = +1
Query: 34 VQSKIVGPPRHSPKSTATRILILNRRFLERRLTDDMLRKRVSITADACTDSAAHKCNYEL 213
++ ++VG P + A+ +++ R RL + R R++ C ++A + EL
Sbjct: 47 MRDRLVGLPEEGREEIASLLMVYERMLGPSRLLRQV-RSRIA-DEGLCAEAAVSEVTREL 104
Query: 214 ---FNRNNFSIRYWSWNTAAAGTRLALQLFLVKIFKVYSFRL-RGLVRVPYRYFSSLPPR 381
+R ++ + NT A L L F+ RL R L + YR FSSLPP
Sbjct: 105 ALQVSRMAEAVARENNNTQEADANLRL----AGEFEEIGRRLVRNLTGISYRAFSSLPP- 159
Query: 382 AGSG*XARLLPSLDVVAVSQA 444
GS A L DV + A
Sbjct: 160 -GSVLVAEQLRPADVAMIDPA 179
>UniRef50_UPI0000DA1C3D Cluster: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to CCR4-NOT
transcription complex, subunit 3 - Rattus norvegicus
Length = 750
Score = 33.1 bits (72), Expect = 6.2
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 364 SSLPPRAGSG*XARLLPSLDVVAVSQAPSPESNPDSPLP 480
+++P G G A P L + A S PSPE PD+PLP
Sbjct: 607 AAIPTGHGRGRLAPHAPPLXLRAHSAVPSPEPLPDTPLP 645
>UniRef50_Q0SK29 Cluster: ABC transporter, subtrate-binding
component; n=1; Rhodococcus sp. RHA1|Rep: ABC
transporter, subtrate-binding component - Rhodococcus
sp. (strain RHA1)
Length = 361
Score = 32.7 bits (71), Expect = 8.2
Identities = 16/29 (55%), Positives = 21/29 (72%), Gaps = 2/29 (6%)
Frame = +2
Query: 209 SFLTATILVYAIGAGIP--RLLAPDLPSN 289
SF TAT ++YAIG G+P L+A LP+N
Sbjct: 108 SFATATAVIYAIGGGVPIVPLVAYPLPAN 136
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 674,754,064
Number of Sequences: 1657284
Number of extensions: 14005618
Number of successful extensions: 37780
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 35968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37759
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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