Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0206.Seq
         (840 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    26   1.6  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    26   1.6  
AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    25   2.2  
AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding pr...    23   8.7  
AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative odorant-b...    23   8.7  
AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding pr...    23   8.7  

>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 140 GAWSVAKTSMILIFRQSSAWSSGLHNTGHTF 232
           G+W+  + S+       +A S+GLH + HTF
Sbjct: 176 GSWNTNQCSLTGSTGGQAAPSTGLHQSNHTF 206


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 140 GAWSVAKTSMILIFRQSSAWSSGLHNTGHTF 232
           G+W+  + S+       +A S+GLH + HTF
Sbjct: 176 GSWNTNQCSLTGSTGGQAAPSTGLHQSNHTF 206


>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = -3

Query: 592 SSTNYDTICELAPQAAALKMYLNETF 515
           S +   +I +++PQ  +LK+ LNE F
Sbjct: 134 SESGAGSIVQISPQRVSLKLRLNEAF 159


>AY146745-1|AAO12105.1|  153|Anopheles gambiae odorant-binding
           protein AgamOBP3 protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = -2

Query: 161 FLPQTMHLIL--WKKRIL 114
           FLP++MHLI   W KR L
Sbjct: 107 FLPESMHLITLNWFKRCL 124


>AJ697725-1|CAG26918.1|  153|Anopheles gambiae putative
           odorant-binding protein OBPjj15 protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = -2

Query: 161 FLPQTMHLIL--WKKRIL 114
           FLP++MHLI   W KR L
Sbjct: 107 FLPESMHLITLNWFKRCL 124


>AF437886-1|AAL84181.1|  153|Anopheles gambiae odorant binding
           protein protein.
          Length = 153

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)
 Frame = -2

Query: 161 FLPQTMHLIL--WKKRIL 114
           FLP++MHLI   W KR L
Sbjct: 107 FLPESMHLITLNWFKRCL 124


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 863,434
Number of Sequences: 2352
Number of extensions: 16706
Number of successful extensions: 72
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88891965
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)