Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0206.Seq
(840 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein C... 123 7e-28
BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate syn... 123 7e-28
BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein. 123 7e-28
AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein. 123 7e-28
>D78586-1|BAA11423.1| 2225|Homo sapiens multifunctional protein CAD
protein.
Length = 2225
Score = 123 bits (297), Expect = 7e-28
Identities = 56/109 (51%), Positives = 76/109 (69%)
Frame = -2
Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381
GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R
Sbjct: 1550 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 1608
Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234
VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+
Sbjct: 1609 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 1657
Score = 108 bits (259), Expect = 3e-23
Identities = 46/83 (55%), Positives = 64/83 (77%)
Frame = -1
Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73
++G G+ +V P L S +D LW ++++ID FA+DHAPHT+EEK PPPG+PGLET+L
Sbjct: 1652 RLGPGKGEVRPELGSRQDVEALWEDMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 1711
Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4
PLLL AV +GRL+++DLL R+ H
Sbjct: 1712 PLLLTAVSEGRLSLDDLLQRLHH 1734
Score = 105 bits (252), Expect = 2e-22
Identities = 54/105 (51%), Positives = 67/105 (63%)
Frame = -3
Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647
+V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A
Sbjct: 1461 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDGPALALA 1519
Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512
LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+
Sbjct: 1520 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 1564
>BC065510-1|AAH65510.1| 2225|Homo sapiens carbamoyl-phosphate
synthetase 2, aspartate transcarbamylase, and
dihydroorotas protein.
Length = 2225
Score = 123 bits (297), Expect = 7e-28
Identities = 56/109 (51%), Positives = 76/109 (69%)
Frame = -2
Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381
GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R
Sbjct: 1550 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 1608
Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234
VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+
Sbjct: 1609 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 1657
Score = 110 bits (264), Expect = 7e-24
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = -1
Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73
++G G+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+L
Sbjct: 1652 RLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 1711
Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4
PLLL AV +GRL+++DLL R+ H
Sbjct: 1712 PLLLTAVSEGRLSLDDLLQRLHH 1734
Score = 105 bits (253), Expect = 2e-22
Identities = 54/105 (51%), Positives = 67/105 (63%)
Frame = -3
Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647
+V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A
Sbjct: 1461 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDAPALALA 1519
Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512
LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+
Sbjct: 1520 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 1564
>BC014178-1|AAH14178.2| 851|Homo sapiens CAD protein protein.
Length = 851
Score = 123 bits (297), Expect = 7e-28
Identities = 56/109 (51%), Positives = 76/109 (69%)
Frame = -2
Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381
GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R
Sbjct: 176 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 234
Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234
VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+
Sbjct: 235 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 283
Score = 110 bits (264), Expect = 7e-24
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = -1
Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73
++G G+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+L
Sbjct: 278 RLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 337
Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4
PLLL AV +GRL+++DLL R+ H
Sbjct: 338 PLLLTAVSEGRLSLDDLLQRLHH 360
Score = 105 bits (253), Expect = 2e-22
Identities = 54/105 (51%), Positives = 67/105 (63%)
Frame = -3
Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647
+V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A
Sbjct: 87 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDAPALALA 145
Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512
LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+
Sbjct: 146 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 190
>AC013413-1|AAY24293.1| 2151|Homo sapiens unknown protein.
Length = 2151
Score = 123 bits (297), Expect = 7e-28
Identities = 56/109 (51%), Positives = 76/109 (69%)
Frame = -2
Query: 560 GSASCSSKDVLK*NFYNFLLEDMTIWQKHFQSWPKKMPVCTHAEREKTAAVILMASLLDR 381
GSA+ K L F L+ + W +HF++WP +P+ HAE++ AAV+++A L R
Sbjct: 1476 GSAA-GLKLYLNETFSELRLDSVVQWMEHFETWPSHLPIVAHAEQQTVAAVLMVAQLTQR 1534
Query: 380 PVHICHVARKEEILIIKAAKERGVKVTCEVCPHHLFLNSNDITKLEKGE 234
VHICHVARKEEIL+IKAAK RG+ VTCEV PHHLFL+ +D+ +L G+
Sbjct: 1535 SVHICHVARKEEILLIKAAKARGLPVTCEVAPHHLFLSHDDLERLGPGK 1583
Score = 110 bits (264), Expect = 7e-24
Identities = 47/83 (56%), Positives = 64/83 (77%)
Frame = -1
Query: 252 KIGKGRAKVCPVLCSPEDQAELWRNISIIDVFATDHAPHTVEEKNSENPPPGYPGLETIL 73
++G G+ +V P L S +D LW N+++ID FA+DHAPHT+EEK PPPG+PGLET+L
Sbjct: 1578 RLGPGKGEVRPELGSRQDVEALWENMAVIDCFASDHAPHTLEEKCGSRPPPGFPGLETML 1637
Query: 72 PLLLNAVHQGRLTIEDLLCRIRH 4
PLLL AV +GRL+++DLL R+ H
Sbjct: 1638 PLLLTAVSEGRLSLDDLLQRLHH 1660
Score = 105 bits (253), Expect = 2e-22
Identities = 54/105 (51%), Positives = 67/105 (63%)
Frame = -3
Query: 826 IVKLPGFIDVHVHVREPGANIKGRF*DLLPQXHWLVVLTMICAMPNTNPSIVDRTAFDYA 647
+V+LPG IDVHVH+REPG K F +TM+CAMPNT P I+D A A
Sbjct: 1387 LVRLPGLIDVHVHLREPGGTHKEDFASGTAAA-LAGGITMVCAMPNTRPPIIDAPALALA 1445
Query: 646 STLARVSARCDYALYVGASSTNYDTICELAPQAAALKMYLNETFT 512
LA ARCD+AL++GASS N T+ +A AA LK+YLNETF+
Sbjct: 1446 QKLAEAGARCDFALFLGASSENAGTLGTVAGSAAGLKLYLNETFS 1490
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,331,616
Number of Sequences: 237096
Number of extensions: 2542106
Number of successful extensions: 5125
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5121
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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