Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0199.Seq
(856 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13; Endopt... 102 1e-20
UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gamb... 88 2e-16
UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8... 87 7e-16
UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella ve... 77 4e-13
UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44; Coelom... 73 9e-12
UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3; Ixodoid... 64 3e-09
UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 ... 64 6e-09
UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes ... 62 2e-08
UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=1... 59 1e-07
UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17; Magn... 59 2e-07
UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma... 58 2e-07
UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8; Pezizom... 57 5e-07
UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7; Pezizomy... 56 9e-07
UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2; Caenorh... 52 1e-05
UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=... 52 1e-05
UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150, w... 46 0.001
UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re... 44 0.004
UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1; F... 44 0.004
UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2; Dictyos... 44 0.006
UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;... 42 0.026
UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2; Cryptos... 42 0.026
UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1; ... 42 0.026
UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep: ... 41 0.046
UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthor... 41 0.046
UniRef50_A4S554 Cluster: Ribosomal protein L28, component of cyt... 38 0.32
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 37 0.56
UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus tropicalis|... 36 1.3
UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9; Trypano... 36 1.3
UniRef50_UPI00006CFBC8 Cluster: hypothetical protein TTHERM_0048... 34 4.0
UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma j... 34 4.0
UniRef50_Q4UBK1 Cluster: 60S ribosomal protein l28, putative; n=... 34 4.0
UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar p... 34 5.3
UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing pr... 33 6.9
UniRef50_A7AMH8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.2
>UniRef50_Q9VZS5 Cluster: 60S ribosomal protein L28; n=13;
Endopterygota|Rep: 60S ribosomal protein L28 -
Drosophila melanogaster (Fruit fly)
Length = 144
Score = 102 bits (245), Expect = 1e-20
Identities = 44/76 (57%), Positives = 59/76 (77%)
Frame = +1
Query: 55 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV D+KG
Sbjct: 4 SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63
Query: 235 FTVVYX*QRLPESPLK 282
FT V + + P K
Sbjct: 64 FTAVLKKGKYAQRPAK 79
>UniRef50_Q7PP83 Cluster: ENSANGP00000014265; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000014265 - Anopheles gambiae
str. PEST
Length = 158
Score = 88.2 bits (209), Expect = 2e-16
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = +1
Query: 46 VKMSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPD 225
+ SS LNW+I+R++NAFL+K+R+I+KPFS EP N+TNL SFRY+GL+H K + + +
Sbjct: 1 IMASSHLNWLIVRDHNAFLLKRRDIRKPFSTEPGNLTNLSSFRYSGLVHHKTI-TITPAE 59
Query: 226 RKGFTVVYX*QRLPESPLK 282
+KG VY +++ P K
Sbjct: 60 KKGVNFVYNRKKVLNKPAK 78
>UniRef50_A2I410 Cluster: Ribosomal protein L28-like protein; n=8;
Neoptera|Rep: Ribosomal protein L28-like protein -
Maconellicoccus hirsutus (hibiscus mealybug)
Length = 139
Score = 86.6 bits (205), Expect = 7e-16
Identities = 40/64 (62%), Positives = 47/64 (73%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
MS+ L WMI RNNNA+L+KKR+IKKPFS EP N+ N+ SFRYNGL+ K V V D K
Sbjct: 1 MSADLYWMITRNNNAYLLKKRDIKKPFSTEPGNLKNVASFRYNGLVQPKTVDVRAAKDGK 60
Query: 232 GFTV 243
GF V
Sbjct: 61 GFVV 64
>UniRef50_A7RYT2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 137
Score = 77.4 bits (182), Expect = 4e-13
Identities = 38/78 (48%), Positives = 49/78 (62%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
MSS L W IIRNN+ FLV+ + K +KEPNNVT L++F+YNGL++KK VGV P K
Sbjct: 1 MSSDLQWSIIRNNSCFLVRSQG--KTLTKEPNNVTGLNAFKYNGLVNKKVVGVDAAPSGK 58
Query: 232 GFTVVYX*QRLPESPLKI 285
G + + P KI
Sbjct: 59 GVVITTRKNKAANKPGKI 76
>UniRef50_P46779 Cluster: 60S ribosomal protein L28; n=44;
Coelomata|Rep: 60S ribosomal protein L28 - Homo sapiens
(Human)
Length = 137
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/65 (52%), Positives = 46/65 (70%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
MS+ L WM++RN ++FL+K+ K+ +S EPNN+ +SFRYNGLIH+K VGV D K
Sbjct: 1 MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58
Query: 232 GFTVV 246
G VV
Sbjct: 59 GVVVV 63
>UniRef50_Q4P4F5 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 221
Score = 71.3 bits (167), Expect = 3e-11
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +1
Query: 55 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
S L W+++RNN++F+VK++ I + FS+EP N+ LHS++Y+GL++ KAVG+ KG
Sbjct: 3 SQDLQWLLVRNNSSFIVKQKGIGRIFSREPRNLVQLHSYKYSGLVNAKAVGIEAAKSGKG 62
Query: 235 FTVVYX*QRLPESPLK 282
+ + S +K
Sbjct: 63 VVITTKNAKQSSSAIK 78
>UniRef50_Q09JQ7 Cluster: 60S ribosomal protein L28; n=3;
Ixodoidea|Rep: 60S ribosomal protein L28 - Argas
monolakensis
Length = 142
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/77 (41%), Positives = 47/77 (61%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
+S + WM++RN ++FLVKKRNIKK FS +P N +++ R+ G I K+A+ V + K
Sbjct: 2 VSRTYRWMVVRNCSSFLVKKRNIKKWFSTDPLNPKGVYANRFAGTIKKRALTVEPHSSGK 61
Query: 232 GFTVVYX*QRLPESPLK 282
G T VY + P K
Sbjct: 62 GVTFVYLAHKGATKPAK 78
>UniRef50_Q4KTF6 Cluster: L28; n=1; Suberites domuncula|Rep: L28 -
Suberites domuncula (Sponge)
Length = 136
Score = 63.7 bits (148), Expect = 6e-09
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKP---FSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 222
MS+ L W +I+N+++FL++++ + F+ EPNNV N +SF++NGL++KK VGV
Sbjct: 1 MSAELQWELIKNSSSFLLRRKGPRGSGVTFTTEPNNVMNKNSFKFNGLVNKKVVGVSSAA 60
Query: 223 DRKGFTVVYX*QRLPESPLKI 285
D KG ++ P K+
Sbjct: 61 DNKGVLFKTKRSKVVSKPAKM 81
>UniRef50_Q4PMZ6 Cluster: Putative secreted protein; n=1; Ixodes
scapularis|Rep: Putative secreted protein - Ixodes
scapularis (Black-legged tick) (Deer tick)
Length = 65
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/50 (58%), Positives = 33/50 (66%)
Frame = +3
Query: 288 GDTANGSIYQFWFLRSXSVTWITVVILELIHAIRTXTSDGMSAFIRSKPI 437
G+TANGS+ Q WFLRS TWITV ILELIHA+ AFIR + I
Sbjct: 5 GETANGSLNQLWFLRSFLPTWITVAILELIHAVSPKPLGATGAFIRPRSI 54
>UniRef50_A6YMN6 Cluster: Large subunit ribosomal protein 28; n=19;
Neodiplogasteridae|Rep: Large subunit ribosomal protein
28 - Pristionchus sp. 11 RS5228
Length = 127
Score = 59.3 bits (137), Expect = 1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Frame = +1
Query: 76 IIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKGFTV 243
+IRNN+AFL ++R I+K FS+EP N+ ++S YNGL + KAVGV D K V
Sbjct: 2 VIRNNSAFLRRQRGIQKAFSREPLNLKGINSPNYNGLTNNKAVGVTLAEDNKSVVV 57
>UniRef50_O82204 Cluster: 60S ribosomal protein L28-1; n=17;
Magnoliophyta|Rep: 60S ribosomal protein L28-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 143
Score = 58.8 bits (136), Expect = 2e-07
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 3/52 (5%)
Frame = +1
Query: 64 LNWMIIRNNNAFLVK---KRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 210
L W I++NNN FLVK + N K FSKE NN+TN+HS++++GL +KK V +
Sbjct: 8 LIWEIVKNNNCFLVKQFGRGNSKVQFSKETNNLTNVHSYKHSGLANKKTVTI 59
>UniRef50_Q7Z0U0 Cluster: Ribosomal protein L28; n=2; Schistosoma
japonicum|Rep: Ribosomal protein L28 - Schistosoma
japonicum (Blood fluke)
Length = 116
Score = 58.4 bits (135), Expect = 2e-07
Identities = 29/64 (45%), Positives = 42/64 (65%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
MSS L W +I+NN+ FL+K+ + FS++P N+ N + FRY G +HKKA+G+ E K
Sbjct: 1 MSSHLIWDLIKNNHCFLMKRG--PECFSRDPLNLKNKNCFRYCGPVHKKAIGIKEERYGK 58
Query: 232 GFTV 243
G V
Sbjct: 59 GVVV 62
>UniRef50_Q4WDL9 Cluster: 60S ribosomal protein L28; n=8;
Pezizomycotina|Rep: 60S ribosomal protein L28 -
Aspergillus fumigatus (Sartorya fumigata)
Length = 157
Score = 57.2 bits (132), Expect = 5e-07
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 228
+SS L W I RN NAFLVK+R FS++P N+ N SF+Y G + KAVG V+ +
Sbjct: 8 VSSDLVWQITRNQNAFLVKRRTGGGSQFSRDPLNLQNKQSFKYAGYANTKAVG-VQATEN 66
Query: 229 KGFTVVYX*QRLPESPLK 282
G V+ P+ P K
Sbjct: 67 GGVVVITKKPGNPQQPAK 84
>UniRef50_Q2U9I8 Cluster: RIB40 genomic DNA, SC111; n=7;
Pezizomycotina|Rep: RIB40 genomic DNA, SC111 -
Aspergillus oryzae
Length = 157
Score = 56.4 bits (130), Expect = 9e-07
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIK-KPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 228
+SS L W + RN NAFLVK+ + FS++P N+ N HSF+Y G + KA+GV P
Sbjct: 8 VSSDLVWQLTRNQNAFLVKRNSGGGSQFSRDPLNLQNKHSFKYAGYANTKAIGV--QPTE 65
Query: 229 KGFTVV 246
G VV
Sbjct: 66 NGGVVV 71
>UniRef50_Q21930 Cluster: 60S ribosomal protein L28; n=2;
Caenorhabditis|Rep: 60S ribosomal protein L28 -
Caenorhabditis elegans
Length = 126
Score = 52.4 bits (120), Expect = 1e-05
Identities = 25/53 (47%), Positives = 36/53 (67%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 210
MS +L W +IRNN+AFL +R I K FS E N+ ++S +Y+GL +K A+ V
Sbjct: 1 MSDALVWQVIRNNSAFLRTQRGIGKRFSTEKFNLKKVNSPKYSGLANKHAIDV 53
>UniRef50_O14069 Cluster: Probable 60S ribosomal protein L28e; n=1;
Schizosaccharomyces pombe|Rep: Probable 60S ribosomal
protein L28e - Schizosaccharomyces pombe (Fission yeast)
Length = 134
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Frame = +1
Query: 46 VKMSSSLNWMIIRNNNAFLVKKRNIKK-PFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 222
+ +S+ L W +IR+NN FLVK+ F++EP NV+ ++ R++GL + KAVGV N
Sbjct: 1 MSVSNDLIWQVIRDNNRFLVKRPEFGGIQFNREPVNVSGKNAQRFSGLCNDKAVGVQANS 60
Query: 223 DRKGFTVVYX*QRLPESPLKI 285
R + + + P K+
Sbjct: 61 PRGVVLITKTNPKNAQKPAKL 81
>UniRef50_A0C5U4 Cluster: Chromosome undetermined scaffold_150,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_150,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 147
Score = 46.0 bits (104), Expect = 0.001
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVV 213
MS + W +++ NNAFLVK+ + S +P N T + ++ G I K AVGVV
Sbjct: 1 MSQQVLWEVVKGNNAFLVKRNGL--TLSTDPFNNTGVQTYSSTGFISKNAVGVV 52
>UniRef50_Q6C5X8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
Similarity - Yarrowia lipolytica (Candida lipolytica)
Length = 183
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 210
+S+ W ++ NA+LVK++ I S++P + NL + +GL H KAVGV
Sbjct: 48 VSNDFIWECTKSTNAYLVKRKGIDTTLSRDPYALNNLSTHYESGLSHDKAVGV 100
>UniRef50_Q5KLF0 Cluster: 60s ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: 60s ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 156
Score = 44.4 bits (100), Expect = 0.004
Identities = 21/53 (39%), Positives = 33/53 (62%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 210
MSS L W+++RN N+F VK + FS+E N+ N + +Y+GL + K V +
Sbjct: 1 MSSDLTWLLVRNWNSFQVKGGH-GPVFSREKGNLLNKSAHKYSGLANSKVVSI 52
>UniRef50_Q9GS21 Cluster: 60S ribosomal protein L28; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L28
- Dictyostelium discoideum (Slime mold)
Length = 132
Score = 43.6 bits (98), Expect = 0.006
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGV 210
MS L W II+ NNAFL + S EP N+ N +S +Y+GL + + V
Sbjct: 1 MSQDLVWSIIKKNNAFLKSSHGL--TLSAEPGNLRNKNSLKYSGLARRTTIDV 51
>UniRef50_UPI0000E7FA5A Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 508
Score = 41.5 bits (93), Expect = 0.026
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = +2
Query: 344 YLDNCGNSRANTCNQNXDQ*WDECFY*IKTN 436
YLDNCGNSRANTC + D C Y KTN
Sbjct: 468 YLDNCGNSRANTCRRAPTS-GDACIYQTKTN 497
>UniRef50_Q5CQC8 Cluster: 60S ribosomal protein L28; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L28 -
Cryptosporidium parvum Iowa II
Length = 127
Score = 41.5 bits (93), Expect = 0.026
Identities = 18/60 (30%), Positives = 36/60 (60%)
Frame = +1
Query: 55 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
S+ L W ++ N +F+ K+N F+ EP N+ NL++ +Y+GL ++++ + P+ G
Sbjct: 3 STELLWQCVKKNTSFI--KKNNGFTFTSEPFNIMNLNTLKYSGLAARRSISMDLVPNSNG 60
>UniRef50_Q5AYY0 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 192
Score = 41.5 bits (93), Expect = 0.026
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 52 MSSSLNWMIIRNNNAFLVKKR-NIKKPFSKEPNNVTNLHSFR 174
+SS L W + RN NA+LVK+ + FS++P NV N HSF+
Sbjct: 8 VSSDLVWQLTRNQNAYLVKRNTHGGVQFSRDPLNVLNKHSFK 49
>UniRef50_Q6QI94 Cluster: LRRG00114; n=1; Rattus norvegicus|Rep:
LRRG00114 - Rattus norvegicus (Rat)
Length = 223
Score = 40.7 bits (91), Expect = 0.046
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -1
Query: 652 PXLDVVAVXQAPSPESNPDSP 590
P LDVVAV QAPSPE NPDSP
Sbjct: 169 PSLDVVAVSQAPSPELNPDSP 189
>UniRef50_Q2M3Y8 Cluster: Ribosomal protein L28; n=1; Phytophthora
infestans|Rep: Ribosomal protein L28 - Phytophthora
infestans (Potato late blight fungus)
Length = 139
Score = 40.7 bits (91), Expect = 0.046
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 55 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
S +L W++ +N ++FLVK+ F++E N+ N + +Y+GL KAV + D+K
Sbjct: 3 SDTLTWLLTKNTSSFLVKRNG--NEFAREKFNLLNRNCRKYSGLASTKAVD-ISISDKK- 58
Query: 235 FTVVYX*QRLPESPLKIK-AIP 297
T+ ++ + P K + A+P
Sbjct: 59 VTLTTKIEKATKKPAKAQNAVP 80
>UniRef50_A4S554 Cluster: Ribosomal protein L28, component of
cytosolic 80S ribosome and 60S large subunit; n=1;
Ostreococcus lucimarinus CCE9901|Rep: Ribosomal protein
L28, component of cytosolic 80S ribosome and 60S large
subunit - Ostreococcus lucimarinus CCE9901
Length = 121
Score = 37.9 bits (84), Expect = 0.32
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +1
Query: 46 VKMSSSLNWMIIRNNNAFL-VKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 222
V S W + + +NAF FS EP NVT SFR +GL + K + + E+
Sbjct: 5 VPASDDFLWQVTKKHNAFTRASTSGHGARFSAEPGNVTAEVSFRASGLANAKTIDIREHD 64
Query: 223 DRKG 234
KG
Sbjct: 65 GGKG 68
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 37.1 bits (82), Expect = 0.56
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -1
Query: 637 VAVXQAPSPESNPDSPLPVTTMVVAETTIES 545
+A+ QAPSPESN +SPLPV M+ I+S
Sbjct: 372 LAISQAPSPESNSNSPLPVKAMLGQYPNIKS 402
>UniRef50_Q28GS0 Cluster: Novel protein; n=1; Xenopus
tropicalis|Rep: Novel protein - Xenopus tropicalis
(Western clawed frog) (Silurana tropicalis)
Length = 118
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/16 (87%), Positives = 15/16 (93%)
Frame = +2
Query: 530 MSALSTFDGSFCDYHG 577
MSALSTFDG+FC YHG
Sbjct: 1 MSALSTFDGTFCAYHG 16
>UniRef50_O00822 Cluster: 60S ribosomal protein L28; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein L28 -
Trypanosoma cruzi
Length = 146
Score = 35.9 bits (79), Expect = 1.3
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 55 SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDR 228
S+ L W+++R N+ FL K+ I+ S +P N + R+ G ++ KA V DR
Sbjct: 4 STDLQWLLVRQNSKFLQKRNGIR--LSSDPFNNNANWTKRHAGFLNTKAAVVKTKGDR 59
>UniRef50_UPI00006CFBC8 Cluster: hypothetical protein
TTHERM_00487140; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00487140 - Tetrahymena
thermophila SB210
Length = 294
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 58 SSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVT 156
S L W I++NNNAFLVK + F+ +P +VT
Sbjct: 2 SQLVWEIVKNNNAFLVKNNGV--AFTTDPFSVT 32
>UniRef50_Q5DDG7 Cluster: SJCHGC07011 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC07011 protein - Schistosoma
japonicum (Blood fluke)
Length = 101
Score = 34.3 bits (75), Expect = 4.0
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +2
Query: 347 LDNCGNSRANTCNQNXDQ*WDECFY*IKTNRRRASRPKSLILMNLDNFC 493
+DNC NSRANTC ++ + F +TNR + + ++D C
Sbjct: 1 MDNCSNSRANTCLESLTRKGTGAFIRTETNRVQRLMTSVPVTSSVDELC 49
>UniRef50_Q4UBK1 Cluster: 60S ribosomal protein l28, putative; n=2;
Theileria|Rep: 60S ribosomal protein l28, putative -
Theileria annulata
Length = 150
Score = 34.3 bits (75), Expect = 4.0
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 64 LNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGL 186
L W ++RNN+AFL K R FS E +N+ + HS R+ L
Sbjct: 20 LLWELVRNNHAFLKKSRT--TTFSLESHNLLSKHSPRFTVL 58
>UniRef50_UPI0000E4A253 Cluster: PREDICTED: similar to Vacuolar
protein sorting protein 36 (ELL-associated protein of 45
kDa), partial; n=3; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Vacuolar protein sorting protein
36 (ELL-associated protein of 45 kDa), partial -
Strongylocentrotus purpuratus
Length = 349
Score = 33.9 bits (74), Expect = 5.3
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 593 PVTRDNHGSRRNYHRKLIRQTFERCVAGIDHA 498
PVTR+ HGS YH +L +Q E +A ++ +
Sbjct: 190 PVTRETHGSGLKYHEELAKQLSEALIAPVEES 221
>UniRef50_Q245G5 Cluster: Cyclin, N-terminal domain containing
protein; n=1; Tetrahymena thermophila SB210|Rep: Cyclin,
N-terminal domain containing protein - Tetrahymena
thermophila SB210
Length = 353
Score = 33.5 bits (73), Expect = 6.9
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +1
Query: 49 KMSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNN-VTN-LHSFRYNGLIHKKAVGVVE 216
K S LNW + N + K+NIK K+ NN +TN L F +N I+K+ + ++E
Sbjct: 36 KKKSYLNWQGCKKINNKQINKQNIKATQIKKKNNQLTNSLLGFSFNQSINKQIIQLLE 93
>UniRef50_A7AMH8 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 146
Score = 33.1 bits (72), Expect = 9.2
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 64 LNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENP 222
L W +I+ NNA++ K + + F+KE N+ H+ Y+GL+ + + +P
Sbjct: 27 LVWELIKKNNAYIFKSGH--ETFTKERYNLMARHTPMYSGLMQNSVMNLELSP 77
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 751,786,707
Number of Sequences: 1657284
Number of extensions: 14091664
Number of successful extensions: 34470
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 33101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34431
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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