Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0199.Seq
         (856 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14969-1|AAA85657.1|  137|Homo sapiens ribosomal protein L28 pro...    73   1e-12
CR457024-1|CAG33305.1|  137|Homo sapiens RPL28 protein.                73   1e-12
BC011582-1|AAH11582.1|  137|Homo sapiens ribosomal protein L28 p...    73   1e-12
BC010182-1|AAH10182.1|  137|Homo sapiens ribosomal protein L28 p...    73   1e-12
BC010173-1|AAH10173.1|  137|Homo sapiens ribosomal protein L28 p...    73   1e-12
AB209627-1|BAD92864.1|   95|Homo sapiens ribosomal protein L28 v...    73   1e-12
BC025395-1|AAH25395.1|  332|Homo sapiens CD300 molecule-like fam...    31   5.3  
AY358364-1|AAQ88730.1|  332|Homo sapiens RLLV422 protein.              31   5.3  
Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.    31   7.1  
X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein.      31   7.1  

>U14969-1|AAA85657.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 52  MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
           MS+ L WM++RN ++FL+K+   K+ +S EPNN+   +SFRYNGLIH+K VGV    D K
Sbjct: 1   MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58

Query: 232 GFTVV 246
           G  VV
Sbjct: 59  GVVVV 63


>CR457024-1|CAG33305.1|  137|Homo sapiens RPL28 protein.
          Length = 137

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 52  MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
           MS+ L WM++RN ++FL+K+   K+ +S EPNN+   +SFRYNGLIH+K VGV    D K
Sbjct: 1   MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58

Query: 232 GFTVV 246
           G  VV
Sbjct: 59  GVVVV 63


>BC011582-1|AAH11582.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 52  MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
           MS+ L WM++RN ++FL+K+   K+ +S EPNN+   +SFRYNGLIH+K VGV    D K
Sbjct: 1   MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58

Query: 232 GFTVV 246
           G  VV
Sbjct: 59  GVVVV 63


>BC010182-1|AAH10182.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 52  MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
           MS+ L WM++RN ++FL+K+   K+ +S EPNN+   +SFRYNGLIH+K VGV    D K
Sbjct: 1   MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58

Query: 232 GFTVV 246
           G  VV
Sbjct: 59  GVVVV 63


>BC010173-1|AAH10173.1|  137|Homo sapiens ribosomal protein L28
           protein.
          Length = 137

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 52  MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
           MS+ L WM++RN ++FL+K+   K+ +S EPNN+   +SFRYNGLIH+K VGV    D K
Sbjct: 1   MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 58

Query: 232 GFTVV 246
           G  VV
Sbjct: 59  GVVVV 63


>AB209627-1|BAD92864.1|   95|Homo sapiens ribosomal protein L28
           variant protein.
          Length = 95

 Score = 72.9 bits (171), Expect = 1e-12
 Identities = 34/65 (52%), Positives = 46/65 (70%)
 Frame = +1

Query: 52  MSSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRK 231
           MS+ L WM++RN ++FL+K+   K+ +S EPNN+   +SFRYNGLIH+K VGV    D K
Sbjct: 9   MSAHLQWMVVRNCSSFLIKRN--KQTYSTEPNNLKARNSFRYNGLIHRKTVGVEPAADGK 66

Query: 232 GFTVV 246
           G  VV
Sbjct: 67  GVVVV 71


>BC025395-1|AAH25395.1|  332|Homo sapiens CD300 molecule-like family
           member g protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 633 ATTSKXGQQGAQITHFPGTGRLVHEXINDY 722
           ATT+K G+ GA+    PGT +  HE  + Y
Sbjct: 169 ATTAKQGKTGAEAPPLPGTSQYGHERTSQY 198


>AY358364-1|AAQ88730.1|  332|Homo sapiens RLLV422 protein.
          Length = 332

 Score = 31.1 bits (67), Expect = 5.3
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 633 ATTSKXGQQGAQITHFPGTGRLVHEXINDY 722
           ATT+K G+ GA+    PGT +  HE  + Y
Sbjct: 169 ATTAKQGKTGAEAPPLPGTSQYGHERTSQY 198


>Z26634-1|CAB42644.1| 3925|Homo sapiens ankyrin B (440 kDa) protein.
          Length = 3925

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 84   QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSSVQXAKA 263
            ++ C    + + ++AV + +E CD PP++  + +    S +  G P  EG  SS      
Sbjct: 3684 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSSTALFPQ 3743

Query: 264  TRK 272
            T K
Sbjct: 3744 THK 3746


>X56958-1|CAA40279.2| 1872|Homo sapiens ankyrin (brank-2) protein.
          Length = 1872

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 17/63 (26%), Positives = 30/63 (47%)
 Frame = +3

Query: 84   QQQCIPCEEAQYQKAVQQGAEQCD*PPLLQVQRLDSQESCWCRGEP*QEGIHSSVQXAKA 263
            ++ C    + + ++AV + +E CD PP++  + +    S +  G P  EG  SS      
Sbjct: 1599 EELCTAQHKQKEEQAVSKESETCDHPPIVSEEDISVGYSTFQDGVPKTEGDSSSTALFPQ 1658

Query: 264  TRK 272
            T K
Sbjct: 1659 THK 1661


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,763,862
Number of Sequences: 237096
Number of extensions: 2168121
Number of successful extensions: 4271
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4265
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10872716010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)