Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0199.Seq
         (856 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY102656-1|AAM27485.1|  236|Drosophila melanogaster GH04183p pro...   102   5e-22
AY071444-1|AAL49066.1|  144|Drosophila melanogaster RE52852p pro...   102   5e-22
AE014296-607|AAF47743.1|  165|Drosophila melanogaster CG12740-PC...   102   5e-22
AE014296-606|AAN11547.1|  144|Drosophila melanogaster CG12740-PD...   102   5e-22
AE014296-605|AAF47742.1|  144|Drosophila melanogaster CG12740-PB...   102   5e-22
AE014296-604|AAN11546.1|  144|Drosophila melanogaster CG12740-PA...   102   5e-22

>AY102656-1|AAM27485.1|  236|Drosophila melanogaster GH04183p
           protein.
          Length = 236

 Score =  102 bits (245), Expect = 5e-22
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 55  SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 96  SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 155

Query: 235 FTVVYX*QRLPESPLK 282
           FT V    +  + P K
Sbjct: 156 FTAVLKKGKYAQRPAK 171


>AY071444-1|AAL49066.1|  144|Drosophila melanogaster RE52852p
           protein.
          Length = 144

 Score =  102 bits (245), Expect = 5e-22
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 55  SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 235 FTVVYX*QRLPESPLK 282
           FT V    +  + P K
Sbjct: 64  FTAVLKKGKYAQRPAK 79


>AE014296-607|AAF47743.1|  165|Drosophila melanogaster CG12740-PC,
           isoform C protein.
          Length = 165

 Score =  102 bits (245), Expect = 5e-22
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 55  SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 235 FTVVYX*QRLPESPLK 282
           FT V    +  + P K
Sbjct: 64  FTAVLKKGKYAQRPAK 79


>AE014296-606|AAN11547.1|  144|Drosophila melanogaster CG12740-PD,
           isoform D protein.
          Length = 144

 Score =  102 bits (245), Expect = 5e-22
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 55  SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 235 FTVVYX*QRLPESPLK 282
           FT V    +  + P K
Sbjct: 64  FTAVLKKGKYAQRPAK 79


>AE014296-605|AAF47742.1|  144|Drosophila melanogaster CG12740-PB,
           isoform B protein.
          Length = 144

 Score =  102 bits (245), Expect = 5e-22
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 55  SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 235 FTVVYX*QRLPESPLK 282
           FT V    +  + P K
Sbjct: 64  FTAVLKKGKYAQRPAK 79


>AE014296-604|AAN11546.1|  144|Drosophila melanogaster CG12740-PA,
           isoform A protein.
          Length = 144

 Score =  102 bits (245), Expect = 5e-22
 Identities = 44/76 (57%), Positives = 59/76 (77%)
 Frame = +1

Query: 55  SSSLNWMIIRNNNAFLVKKRNIKKPFSKEPNNVTNLHSFRYNGLIHKKAVGVVENPDRKG 234
           SS LNW+IIRNNNAFL+KKR++KKPFS EPNN+ ++ S+RY+G++HKK +GVV   D+KG
Sbjct: 4   SSHLNWLIIRNNNAFLLKKRDVKKPFSTEPNNLASVSSYRYSGIVHKKTLGVVPAADKKG 63

Query: 235 FTVVYX*QRLPESPLK 282
           FT V    +  + P K
Sbjct: 64  FTAVLKKGKYAQRPAK 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,878,965
Number of Sequences: 53049
Number of extensions: 663520
Number of successful extensions: 1557
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1554
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)