Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0197.Seq
         (872 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    25   1.0  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    23   4.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   4.1  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   4.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   4.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   7.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   7.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   9.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   9.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.6  

>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = +1

Query: 154 HKHGGGLVLEDDRHNIEHHIASAG-LEH 234
           H H  G  +    H + HH+A+ G L+H
Sbjct: 322 HHHHAGHHIHAQHHVVNHHVAANGSLKH 349


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/17 (52%), Positives = 14/17 (82%)
 Frame = +1

Query: 481 AINLIKASLISNCLNMF 531
           A + ++ASLIS+CL+ F
Sbjct: 117 ASSKLRASLISSCLSFF 133


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 592 SIFMRFKLNAYLSYFEYLYLI*T*FKSNMSG 684
           S   RF    + SYF YL  I T +   +SG
Sbjct: 74  SFMSRFLCLPFYSYFFYLSYIYTTYSRKLSG 104


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 235 RAQDQQKRYGVQCCVCRPR 179
           RA +Q  R+G  C +C P+
Sbjct: 11  RASNQLFRFGQFCAICVPK 29


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +1

Query: 592 SIFMRFKLNAYLSYFEYLYLI*T*FKSNMSG 684
           S   RF    + SYF YL  I T +   +SG
Sbjct: 30  SFMSRFLCLPFYSYFFYLSYIYTTYSRKLSG 60


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 42  LPPRSCVREEGAQPPSQXPS*KGKIRAKPQADSP 143
           LP    VR +   P     + KGK+RAK Q  +P
Sbjct: 294 LPNTKNVRRK-TNPAGVTTTTKGKVRAKTQNATP 326


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +3

Query: 42  LPPRSCVREEGAQPPSQXPS*KGKIRAKPQADSP 143
           LP    VR +   P     + KGK+RAK Q  +P
Sbjct: 294 LPNTKNVRRK-TNPAGVTTTTKGKVRAKTQNATP 326


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +1

Query: 190 RHNIEHHIASAGLEHGSFEHGGWNK 264
           RHN   H+ S     G   H  W K
Sbjct: 398 RHNFNRHLNSNRAPLGLHFHASWLK 422


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/25 (36%), Positives = 10/25 (40%)
 Frame = +1

Query: 190 RHNIEHHIASAGLEHGSFEHGGWNK 264
           RHN   H+ S     G   H  W K
Sbjct: 405 RHNFNRHLNSNRAPLGLHFHASWLK 429


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -1

Query: 332 LITSLLETTMLIASVFQTSMLQTLF 258
           L   L++ ++  A +FQ S LQT F
Sbjct: 509 LFNGLVDYSLWKALIFQISNLQTTF 533


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,907
Number of Sequences: 336
Number of extensions: 3386
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)