Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0197.Seq
         (872 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens ...    33   1.0  
AK090448-1|BAC03429.1|  700|Homo sapiens FLJ00369 protein protein.     31   5.5  

>AK127311-1|BAC86927.1|  223|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45380 fis, clone BRHIP3020733. ).
          Length = 223

 Score = 33.5 bits (73), Expect = 1.0
 Identities = 13/28 (46%), Positives = 17/28 (60%)
 Frame = -1

Query: 281 TSMLQTLFQPPCSKLPCSRPAEAIWCSM 198
           TS+  T+  PP   L C  PAEA+WC +
Sbjct: 174 TSLPDTMMLPPSRALWCHLPAEALWCRL 201


>AK090448-1|BAC03429.1|  700|Homo sapiens FLJ00369 protein protein.
          Length = 700

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 18/38 (47%), Positives = 20/38 (52%)
 Frame = -1

Query: 260 FQPPCSKLPCSRPAEAIWCSMLCLSSSRTSPPPCLCSV 147
           F+PPC   P  R A A WC  L       +PPP LCSV
Sbjct: 583 FKPPCPLPPTPRLAPASWCPSL-------NPPP-LCSV 612


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,165,625
Number of Sequences: 237096
Number of extensions: 1864147
Number of successful extensions: 4652
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4652
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)