Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0196.Seq
         (822 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    27   0.24 
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    27   0.24 
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      27   0.24 
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      27   0.24 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.31 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    26   0.31 
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.9  
DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory pro...    21   8.9  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   8.9  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 697 VTLSPAAAAGRISSKRDSRSVADLEYVPWLQPARYHHRCRATKSSQ 560
           VT+      G+IS+  +       + VP+ QP   H R +A ++ Q
Sbjct: 4   VTIDEGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQ 49


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 697 VTLSPAAAAGRISSKRDSRSVADLEYVPWLQPARYHHRCRATKSSQ 560
           VT+      G+IS+  +       + VP+ QP   H R +A ++ Q
Sbjct: 6   VTIEEGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQ 51


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 697 VTLSPAAAAGRISSKRDSRSVADLEYVPWLQPARYHHRCRATKSSQ 560
           VT+      G+IS+  +       + VP+ QP   H R +A ++ Q
Sbjct: 4   VTIEEGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQ 49


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 26.6 bits (56), Expect = 0.24
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 697 VTLSPAAAAGRISSKRDSRSVADLEYVPWLQPARYHHRCRATKSSQ 560
           VT+      G+IS+  +       + VP+ QP   H R +A ++ Q
Sbjct: 6   VTIEEGKLLGKISTNINGEEFCSFQGVPYAQPPIGHLRFKAPQAPQ 51


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 318 KITYVMYLMKLXSAW-LKCQR-TPNCTQSCWSHLLC 419
           +I Y  + ++L +     CQ  TPN T + WSH  C
Sbjct: 119 RICYYHFTLELYTVLGAACQVCTPNATNTVWSHCQC 154


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 318 KITYVMYLMKLXSAW-LKCQR-TPNCTQSCWSHLLC 419
           +I Y  + ++L +     CQ  TPN T + WSH  C
Sbjct: 119 RICYYHFTLELYTVLGAACQVCTPNATNTVWSHCQC 154


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = +2

Query: 344 EAXKRLAEVPKDTKLYSELLVTLI 415
           +A K L   PK  K+YS LL+T +
Sbjct: 11  DALKILGIGPKSNKIYSFLLLTTL 34


>DQ855505-1|ABH88192.1|  119|Tribolium castaneum chemosensory
           protein 19 protein.
          Length = 119

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = -2

Query: 296 DELGSACSKIGSSSKFNXXXXLFIVFHNLETLLLDKTALFD 174
           D L S C+K     K      +  + HN + +  + TA +D
Sbjct: 64  DALKSDCAKCSEKQKEMTKKVIHFLSHNKQQMWKELTAKYD 104


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 156 PSHRFLRPF 130
           P HRFL PF
Sbjct: 376 PDHRFLEPF 384


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,675
Number of Sequences: 336
Number of extensions: 3250
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)