Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0194.Seq
         (765 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ002686-1|CAA05690.1|  597|Caenorhabditis elegans alkyl-dihydro...    48   1e-05
AC024801-10|AAK68514.1|  597|Caenorhabditis elegans Alkyl-dihydr...    48   1e-05
Z66513-15|CAA91337.3|  487|Caenorhabditis elegans Hypothetical p...    40   0.003
AL110499-6|CAB57915.2|  487|Caenorhabditis elegans Hypothetical ...    40   0.003
Z74031-13|CAE54903.1|  383|Caenorhabditis elegans Hypothetical p...    33   0.29 
Z74031-12|CAE54902.1|  460|Caenorhabditis elegans Hypothetical p...    33   0.29 
Z74031-11|CAD54138.1|  474|Caenorhabditis elegans Hypothetical p...    33   0.29 
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   4.8  
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   4.8  
AL161711-4|CAC44301.2|  301|Caenorhabditis elegans Hypothetical ...    28   6.3  
Z81491-10|CAB04023.3|  282|Caenorhabditis elegans Hypothetical p...    28   8.4  
AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal ne...    28   8.4  

>AJ002686-1|CAA05690.1|  597|Caenorhabditis elegans
           alkyl-dihydroxyacetonephosphatesynthase protein.
          Length = 597

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 186 EETIRLGGSMVHHHGIGKHRVHWSKLEHGSAW-ALLEGLKKQFDPNGIMNTGTIYPI 19
           +E I  GGS+ HHHG+GK R  W    +G+   ALL+ +K + DP  I  +  +  I
Sbjct: 533 DEIIACGGSISHHHGVGKIRKQWMLTTNGAVGIALLKAIKSELDPANIFASANLIDI 589


>AC024801-10|AAK68514.1|  597|Caenorhabditis elegans
           Alkyl-dihydroxyacetonephosphatesynthase protein 1
           protein.
          Length = 597

 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
 Frame = -1

Query: 186 EETIRLGGSMVHHHGIGKHRVHWSKLEHGSAW-ALLEGLKKQFDPNGIMNTGTIYPI 19
           +E I  GGS+ HHHG+GK R  W    +G+   ALL+ +K + DP  I  +  +  I
Sbjct: 533 DEIIACGGSISHHHGVGKIRKQWMLTTNGAVGIALLKAIKSELDPANIFASANLIDI 589


>Z66513-15|CAA91337.3|  487|Caenorhabditis elegans Hypothetical
           protein F54D5.12 protein.
          Length = 487

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -1

Query: 258 LHVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALL- 82
           L++   K  EE++K   P    + E  +  GGS+   HGIG+ ++ +S         LL 
Sbjct: 412 LNITSEKHNEELEKLLYPF---LYEWVVDHGGSISAEHGIGQLKLPYSTFGKDPEERLLT 468

Query: 81  EGLKKQFDPNGIMN 40
           + LK  FDPNGI+N
Sbjct: 469 KKLKNIFDPNGILN 482


>AL110499-6|CAB57915.2|  487|Caenorhabditis elegans Hypothetical
           protein F54D5.12 protein.
          Length = 487

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = -1

Query: 258 LHVVDCKPEEEIDKYHNPLNKIICEETIRLGGSMVHHHGIGKHRVHWSKLEHGSAWALL- 82
           L++   K  EE++K   P    + E  +  GGS+   HGIG+ ++ +S         LL 
Sbjct: 412 LNITSEKHNEELEKLLYPF---LYEWVVDHGGSISAEHGIGQLKLPYSTFGKDPEERLLT 468

Query: 81  EGLKKQFDPNGIMN 40
           + LK  FDPNGI+N
Sbjct: 469 KKLKNIFDPNGILN 482


>Z74031-13|CAE54903.1|  383|Caenorhabditis elegans Hypothetical
           protein F32D8.12c protein.
          Length = 383

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 165 GSMVHHHGIGKHRVHWSKLEHG-SAWALLEGLKKQFDPNGIMNTGTIYP 22
           G+    HGIG  +  + + E G +   L+  +K   DPN IMN G + P
Sbjct: 333 GTCTGEHGIGLGKRKYLREELGENTVRLMHTIKHALDPNNIMNPGKVLP 381


>Z74031-12|CAE54902.1|  460|Caenorhabditis elegans Hypothetical
           protein F32D8.12b protein.
          Length = 460

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 165 GSMVHHHGIGKHRVHWSKLEHG-SAWALLEGLKKQFDPNGIMNTGTIYP 22
           G+    HGIG  +  + + E G +   L+  +K   DPN IMN G + P
Sbjct: 410 GTCTGEHGIGLGKRKYLREELGENTVRLMHTIKHALDPNNIMNPGKVLP 458


>Z74031-11|CAD54138.1|  474|Caenorhabditis elegans Hypothetical
           protein F32D8.12a protein.
          Length = 474

 Score = 32.7 bits (71), Expect = 0.29
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = -1

Query: 165 GSMVHHHGIGKHRVHWSKLEHG-SAWALLEGLKKQFDPNGIMNTGTIYP 22
           G+    HGIG  +  + + E G +   L+  +K   DPN IMN G + P
Sbjct: 424 GTCTGEHGIGLGKRKYLREELGENTVRLMHTIKHALDPNNIMNPGKVLP 472


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
           protein F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = -2

Query: 494 NNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDI 324
           N+ N   + V +E V  L+  N   T E   C S    I + V+  IRT F   DDI
Sbjct: 45  NDQNDAENTVLSEGVSTLRI-NENMTKEDRACISAALFIKKRVVESIRTVFQSRDDI 100


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
           protein F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = -2

Query: 494 NNLNWGPDKVAAERVQILKTGNMGFTTEVSGCWSCIHEIYESVINRIRTEFPHADDI 324
           N+ N   + V +E V  L+  N   T E   C S    I + V+  IRT F   DDI
Sbjct: 45  NDQNDAENTVLSEGVSTLRI-NENMTKEDRACISAALFIKKRVVESIRTVFQSRDDI 100


>AL161711-4|CAC44301.2|  301|Caenorhabditis elegans Hypothetical
           protein Y10G11A.1 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 263 RRSTCWCRSDSYERNDRPAW*CRRRAGTQYEY 358
           R S+C+C  DS    + P W CR+  G  ++Y
Sbjct: 59  RCSSCYCVFDSAVGTNNPEW-CRKFVGLYHKY 89


>Z81491-10|CAB04023.3|  282|Caenorhabditis elegans Hypothetical
           protein D1086.6 protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = -3

Query: 361 TVFVLSSRTPTTSPCWAVIPLIAIRTAPTCTSSTITRR 248
           T  ++ S T TT+P  +  P     T PT TS+T T R
Sbjct: 156 TTTIIVSSTTTTNPTTSTTPTTPTTTTPT-TSTTTTAR 192


>AF043702-7|AAK21492.4| 1655|Caenorhabditis elegans Intestinal
            neurexin-like protein 1 protein.
          Length = 1655

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = -3

Query: 748  DMKNRLQHPALKIMXEGYRPSIARLYDAEDGTQHFTHFADGKCVLIFMAEGNPRIAKVT 572
            DM+ + +H A   M E Y P++ ++   E G    T    G C + + A  +P  A  T
Sbjct: 1131 DMREKTEHLATSEMYEAYGPALVKV-GCEVGCSSITCLNGGHCSVAW-ANTDPSAATTT 1187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,963,484
Number of Sequences: 27780
Number of extensions: 427231
Number of successful extensions: 1106
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1103
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)