Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0191.Seq
         (953 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p pro...    32   1.3  
AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA prote...    32   1.3  
AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA prote...    32   1.3  
AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix...    32   1.3  
AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA...    32   1.3  
AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix...    32   1.3  
AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-P...    30   4.1  
AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-P...    29   7.1  
AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-P...    29   7.1  

>AY061327-1|AAL28875.1|  719|Drosophila melanogaster LD24749p
           protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 445 TYDFVIKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTG 564
           +Y  +I    KNSR G +P S I S +  H+P F N  +G
Sbjct: 415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454


>AJ243916-1|CAB51032.1|  719|Drosophila melanogaster DOMINA protein
           (WHN-homologue) protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 445 TYDFVIKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTG 564
           +Y  +I    KNSR G +P S I S +  H+P F N  +G
Sbjct: 415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454


>AJ243814-1|CAB51073.1|  719|Drosophila melanogaster DOMINA protein
           protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 445 TYDFVIKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTG 564
           +Y  +I    KNSR G +P S I S +  H+P F N  +G
Sbjct: 415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454


>AF264033-1|AAF91395.1|  719|Drosophila melanogaster winged-helix
           protein jumeaux protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 445 TYDFVIKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTG 564
           +Y  +I    KNSR G +P S I S +  H+P F N  +G
Sbjct: 415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454


>AE014297-1143|AAF54525.1|  719|Drosophila melanogaster CG4029-PA
           protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 445 TYDFVIKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTG 564
           +Y  +I    KNSR G +P S I S +  H+P F N  +G
Sbjct: 415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454


>AB028890-1|BAA94598.1|  719|Drosophila melanogaster Winged-helix
           nude transcriptionfactor protein.
          Length = 719

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 445 TYDFVIKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTG 564
           +Y  +I    KNSR G +P S I S +  H+P F N  +G
Sbjct: 415 SYSCLIALALKNSRAGSLPVSEIYSFLCQHFPYFENAPSG 454


>AE014296-2193|AAN11858.1| 1294|Drosophila melanogaster CG11006-PC,
           isoform C protein.
          Length = 1294

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 22/71 (30%), Positives = 31/71 (43%)
 Frame = +1

Query: 460 IKKKKKNSRGGPVPNSPIVSRITIHWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKR 639
           IK + +      VP+  ++  I     S     TG   A  +L++  H PL   GVI K 
Sbjct: 30  IKIRTQQLHTHAVPSLSLLPSIYPSSSSSSLAATGSLSASASLVSHSHPPLQLRGVINKY 89

Query: 640 PAPIALPNSCA 672
             P  LP+S A
Sbjct: 90  SLPSHLPSSAA 100


>AE014296-2194|AAN11859.1| 1257|Drosophila melanogaster CG11006-PB,
           isoform B protein.
          Length = 1257

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 559 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 672
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 26  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 63


>AE014296-2192|AAN11860.2| 1272|Drosophila melanogaster CG11006-PD,
           isoform D protein.
          Length = 1272

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +1

Query: 559 TGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSCA 672
           TG   A  +L++  H PL   GVI K   P  LP+S A
Sbjct: 41  TGSLSASASLVSHSHPPLQLRGVINKYSLPSHLPSSAA 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,081,768
Number of Sequences: 53049
Number of extensions: 818361
Number of successful extensions: 1578
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)