Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0183.Seq
         (928 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2QXL5 Cluster: Hydrolase, alpha/beta fold family prote...    34   5.9  
UniRef50_Q4P4W1 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q2QXL5 Cluster: Hydrolase, alpha/beta fold family protein,
           putative; n=3; Oryza sativa|Rep: Hydrolase, alpha/beta
           fold family protein, putative - Oryza sativa subsp.
           japonica (Rice)
          Length = 186

 Score = 33.9 bits (74), Expect = 5.9
 Identities = 12/21 (57%), Positives = 15/21 (71%)
 Frame = -2

Query: 504 MLHNPPEARCGGPRGPPHTAP 442
           +LH PP+  CG P GPP T+P
Sbjct: 19  ILHPPPQKLCGSPGGPPVTSP 39


>UniRef50_Q4P4W1 Cluster: Putative uncharacterized protein; n=1;
           Ustilago maydis|Rep: Putative uncharacterized protein -
           Ustilago maydis (Smut fungus)
          Length = 1453

 Score = 33.5 bits (73), Expect = 7.8
 Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
 Frame = -1

Query: 376 SRLGTPTQPPSLTTASRAGRSVCPP--ILKSK*AFDATIPIQLT 251
           SRL  PTQPP+ T+ASR   +V PP  +L  + +FD T+P   T
Sbjct: 235 SRLSNPTQPPAPTSASRT--TVAPPSAVLPLQSSFD-TLPASRT 275


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,670,522
Number of Sequences: 1657284
Number of extensions: 14628409
Number of successful extensions: 39081
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 36175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38993
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 85260991088
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)