Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0183.Seq
         (928 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ083331-1|AAZ30731.1|  157|Homo sapiens glutaredoxin 5 protein.       33   1.5  
BC047680-1|AAH47680.1|  157|Homo sapiens glutaredoxin 5 homolog ...    33   1.5  
BC023528-1|AAH23528.2|  157|Homo sapiens glutaredoxin 5 homolog ...    33   1.5  
AB223038-1|BAF02301.1|  157|Homo sapiens glutaredoxin 5 homolog ...    33   1.5  
BC111558-1|AAI11559.1|  302|Homo sapiens hypothetical protein LO...    31   7.9  
AK128598-1|BAC87522.1|  302|Homo sapiens protein ( Homo sapiens ...    31   7.9  

>DQ083331-1|AAZ30731.1|  157|Homo sapiens glutaredoxin 5 protein.
          Length = 157

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 487 GGALWGP-ARSATYCTSGGGICSELVLIDRFQPFIIYVSRLGTPTQP 350
           GG LWGP  R+A     GGG   +L  + +    ++++   GTP QP
Sbjct: 21  GGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLK--GTPEQP 65


>BC047680-1|AAH47680.1|  157|Homo sapiens glutaredoxin 5 homolog (S.
           cerevisiae) protein.
          Length = 157

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 487 GGALWGP-ARSATYCTSGGGICSELVLIDRFQPFIIYVSRLGTPTQP 350
           GG LWGP  R+A     GGG   +L  + +    ++++   GTP QP
Sbjct: 21  GGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLK--GTPEQP 65


>BC023528-1|AAH23528.2|  157|Homo sapiens glutaredoxin 5 homolog (S.
           cerevisiae) protein.
          Length = 157

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 487 GGALWGP-ARSATYCTSGGGICSELVLIDRFQPFIIYVSRLGTPTQP 350
           GG LWGP  R+A     GGG   +L  + +    ++++   GTP QP
Sbjct: 21  GGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLK--GTPEQP 65


>AB223038-1|BAF02301.1|  157|Homo sapiens glutaredoxin 5 homolog
           protein.
          Length = 157

 Score = 33.1 bits (72), Expect = 1.5
 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
 Frame = -1

Query: 487 GGALWGP-ARSATYCTSGGGICSELVLIDRFQPFIIYVSRLGTPTQP 350
           GG LWGP  R+A     GGG   +L  + +    ++++   GTP QP
Sbjct: 21  GGGLWGPGVRAAGSGAGGGGSAEQLDALVKKDKVVVFLK--GTPEQP 65


>BC111558-1|AAI11559.1|  302|Homo sapiens hypothetical protein
           LOC284837 protein.
          Length = 302

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = -2

Query: 504 MLHNPPEARCGGPRGPPHTAPAAAESVLNWCX*TDSNPSSSTCPAWALRHSPLPSRPPHE 325
           +LH   E R GGPRGP H+AP        W        ++ T  +W   H+  PSR P +
Sbjct: 5   LLHQR-ETRSGGPRGPRHSAPTGP----GW-------HNAPTLQSWEESHA--PSRDPRD 50

Query: 324 PGG 316
             G
Sbjct: 51  HQG 53


>AK128598-1|BAC87522.1|  302|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46757 fis, clone TRACH3023752. ).
          Length = 302

 Score = 30.7 bits (66), Expect = 7.9
 Identities = 22/63 (34%), Positives = 29/63 (46%)
 Frame = -2

Query: 504 MLHNPPEARCGGPRGPPHTAPAAAESVLNWCX*TDSNPSSSTCPAWALRHSPLPSRPPHE 325
           +LH   E R GGPRGP H+AP        W        ++ T  +W   H+  PSR P +
Sbjct: 5   LLHQR-ETRSGGPRGPRHSAPTGP----GW-------HNAPTLQSWEESHA--PSRDPRD 50

Query: 324 PGG 316
             G
Sbjct: 51  HQG 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,616,536
Number of Sequences: 237096
Number of extensions: 2364569
Number of successful extensions: 5917
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5380
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5916
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)