Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0183.Seq
         (928 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023113-1|AAY55529.1|  423|Drosophila melanogaster IP03677p pro...    30   3.9  
BT024225-1|ABC86287.1|  805|Drosophila melanogaster LP17019p pro...    29   9.0  
AE014296-1771|AAF50191.1|  660|Drosophila melanogaster CG14165-P...    29   9.0  

>BT023113-1|AAY55529.1|  423|Drosophila melanogaster IP03677p
           protein.
          Length = 423

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = +1

Query: 433 RRRWCSMWRTARAPTTR 483
           RRRWC  WRT R P  R
Sbjct: 395 RRRWCCWWRTLRQPGGR 411


>BT024225-1|ABC86287.1|  805|Drosophila melanogaster LP17019p
           protein.
          Length = 805

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 429 IPPPLVQYVADRAGPHNAPPVDY 497
           +P P  QYV D     N PPVDY
Sbjct: 677 VPVPYEQYVKDHPEYRNHPPVDY 699


>AE014296-1771|AAF50191.1|  660|Drosophila melanogaster CG14165-PA
           protein.
          Length = 660

 Score = 29.1 bits (62), Expect = 9.0
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +3

Query: 429 IPPPLVQYVADRAGPHNAPPVDY 497
           +P P  QYV D     N PPVDY
Sbjct: 532 VPVPYEQYVKDHPEYRNHPPVDY 554


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,123,684
Number of Sequences: 53049
Number of extensions: 727116
Number of successful extensions: 1964
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1728
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1964
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)