Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0181.Seq
         (897 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    29   0.049
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   4.3  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   4.3  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    23   4.3  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   5.7  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.9  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 29.1 bits (62), Expect = 0.049
 Identities = 13/32 (40%), Positives = 21/32 (65%)
 Frame = -1

Query: 675  DVLSLRPTTTLKWTLKKRIYGTRYRLRIKPYN 580
            + + + PT   K+TL+K + GTRY++  K YN
Sbjct: 1441 ETVQIGPTVE-KYTLEKLLCGTRYQVYAKAYN 1471


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 313 YILRFTCLLYNMIFFLYTYIF 375
           ++ RF CL +   FF  +YI+
Sbjct: 75  FMSRFLCLPFYSYFFYLSYIY 95


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +1

Query: 313 YILRFTCLLYNMIFFLYTYIF 375
           ++ RF CL +   FF  +YI+
Sbjct: 31  FMSRFLCLPFYSYFFYLSYIY 51


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +2

Query: 596 RKRYLVP*ILFFKVHFNVVVGLSDKTSGT-FVLERCTGV 709
           R++YL P +L   +  N++VG      GT  V  + TGV
Sbjct: 724 RRQYLCPVLLRVSILRNIIVGTLMMVLGTGCVRIKITGV 762


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = +2

Query: 122 YFVFILCIYLLGVLKLYCVYF 184
           YF +   I+ + +L L C+Y+
Sbjct: 115 YFYYAFIIFTVHLLFLLCIYY 135



 Score = 21.8 bits (44), Expect = 7.5
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +2

Query: 122 YFVFILCIYLLGVLKLYCVYF 184
           YF +   ++ + +L L C+Y+
Sbjct: 240 YFYYAFILFTVHLLLLVCIYY 260


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 614 VLDTVYGLNHTIDFNIEKLRTPHSY 540
           V   V  + HT  FN+  L +P+SY
Sbjct: 72  VFGKVEPVPHTSSFNMGYLVSPYSY 96


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 122 YFVFILCIYLLGV 160
           YFVF+LC  L+ +
Sbjct: 397 YFVFLLCSILVNI 409


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,706
Number of Sequences: 336
Number of extensions: 4533
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24927353
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)