Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0177.Seq
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   4.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   4.0  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.2  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 633 KSSARYGGDQQLHW 674
           K  ARYG DQQ  W
Sbjct: 573 KCRARYGLDQQNQW 586


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/14 (64%), Positives = 9/14 (64%)
 Frame = +3

Query: 633 KSSARYGGDQQLHW 674
           K  ARYG DQQ  W
Sbjct: 465 KCRARYGLDQQNQW 478


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 470 VRFCXCRPXFCDQKTAEQR 414
           + F  C    C QK AE+R
Sbjct: 345 ISFMACSSAGCSQKVAEER 363


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/41 (24%), Positives = 19/41 (46%)
 Frame = -2

Query: 285 GKAQSSHQSVFTCTVQSNSTRSGRDIYRSLILTRHHGNILA 163
           GK     + +  C     S RS  ++   +  T+H+ NI++
Sbjct: 469 GKGAEQTRQILKCMWCGQSFRSLAEMTSHMQQTQHYTNIIS 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,628
Number of Sequences: 336
Number of extensions: 3227
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)