Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0177.Seq
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protei...    29   0.18 
AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related ...    29   0.18 
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    25   2.9  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.8  

>Y17702-1|CAA76822.2|  260|Anopheles gambiae putative gVAG protein
           precursor protein.
          Length = 260

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 60  CAT*LCCRPGGHSRCNAYHDSGGGRCGNYQ 149
           C++ LC R G H  CN    SGG  C   Q
Sbjct: 25  CSSDLCPRGGPHVGCNPPSSSGGPTCQGKQ 54


>AF457548-1|AAL68778.1|  178|Anopheles gambiae antigen 5-related 1
           protein protein.
          Length = 178

 Score = 28.7 bits (61), Expect = 0.18
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = +3

Query: 60  CAT*LCCRPGGHSRCNAYHDSGGGRCGNYQ 149
           C++ LC R G H  CN    SGG  C   Q
Sbjct: 25  CSSDLCPRGGPHVGCNPPSSSGGPTCQGKQ 54


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -1

Query: 229 HPERQGHIPFPDTHQASRQYTGACWY 152
           H ++Q H   P  HQ  +Q+   C Y
Sbjct: 30  HQQQQNHQRMPHHHQQQQQHQVKCHY 55


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 13/51 (25%), Positives = 19/51 (37%)
 Frame = -2

Query: 267 HQSVFTCTVQSNSTRSGRDIYRSLILTRHHGNILALVGTLDNCRIYRXLNR 115
           H   F C  + +S R  R  Y      R H + L  +G L    +    +R
Sbjct: 374 HGLCFNCLRKGHSARECRSTYVCQQCKRKHHSKLCKIGRLSEVEVVPSTSR 424


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,803
Number of Sequences: 2352
Number of extensions: 13758
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)