Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0176.Seq
         (901 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031016-1|AAH31016.1|  147|Homo sapiens chromosome 16 open read...    31   5.7  
BC022427-1|AAH22427.1|  147|Homo sapiens chromosome 16 open read...    31   5.7  
BC013040-1|AAH13040.2|  147|Homo sapiens chromosome 16 open read...    31   5.7  

>BC031016-1|AAH31016.1|  147|Homo sapiens chromosome 16 open reading
           frame 75 protein.
          Length = 147

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = -1

Query: 505 LRQLAKGGCAARRLSWVTPGFSQSRRCKTTGQXIVIRLXXGRIGYRAPPYSFRLRGLVRV 326
           LR+ A+GG  A RLS    G           Q  V+    G    R P   F +RGL RV
Sbjct: 30  LRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARLRDPSGDFSVRGLERV 89

Query: 325 P 323
           P
Sbjct: 90  P 90


>BC022427-1|AAH22427.1|  147|Homo sapiens chromosome 16 open reading
           frame 75 protein.
          Length = 147

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = -1

Query: 505 LRQLAKGGCAARRLSWVTPGFSQSRRCKTTGQXIVIRLXXGRIGYRAPPYSFRLRGLVRV 326
           LR+ A+GG  A RLS    G           Q  V+    G    R P   F +RGL RV
Sbjct: 30  LRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARLRDPSGDFSVRGLERV 89

Query: 325 P 323
           P
Sbjct: 90  P 90


>BC013040-1|AAH13040.2|  147|Homo sapiens chromosome 16 open reading
           frame 75 protein.
          Length = 147

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 22/61 (36%), Positives = 26/61 (42%)
 Frame = -1

Query: 505 LRQLAKGGCAARRLSWVTPGFSQSRRCKTTGQXIVIRLXXGRIGYRAPPYSFRLRGLVRV 326
           LR+ A+GG  A RLS    G           Q  V+    G    R P   F +RGL RV
Sbjct: 30  LRRDAEGGPGAWRLSRAAAGRGPLDLAAVWMQGRVVMADRGEARLRDPSGDFSVRGLERV 89

Query: 325 P 323
           P
Sbjct: 90  P 90


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,152,121
Number of Sequences: 237096
Number of extensions: 2072471
Number of successful extensions: 8657
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8657
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)