Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0175.Seq
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    25   3.0  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       24   6.9  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    23   9.2  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    23   9.2  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    23   9.2  

>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 244 GLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 137
           G  P      ++ R W GV+   KR  P   S ++D
Sbjct: 406 GKKPPNNPLEKTNRLWGGVINDIKRRYPMYKSDIMD 441


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
 Frame = -3

Query: 289 PTLRSV-PLAATXVATGLAPSTGKRPRSRRTWTGVVATRKRNLPNTTSP 146
           PT  +V P   T   TG  P T + P S        +T     P TT P
Sbjct: 415 PTTSTVAPGTTTTTPTGANPGTTQPPTSDAPNHTTTSTTTEGNPGTTRP 463


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 241 LAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 137
           + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 201 VGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 241 LAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 137
           + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 201 VGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 233


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 11/35 (31%), Positives = 17/35 (48%)
 Frame = -3

Query: 241 LAPSTGKRPRSRRTWTGVVATRKRNLPNTTSPVID 137
           + P   + PR    WTGV+ T     PN+   ++D
Sbjct: 87  VGPLRFRHPRPAEKWTGVLNT--TTPPNSCVQIVD 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 732,946
Number of Sequences: 2352
Number of extensions: 12522
Number of successful extensions: 38
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)