Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0173.Seq
         (822 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p pro...    30   3.3  
AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7 ...    30   3.3  
AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA ...    30   3.3  
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         29   5.8  

>AY051795-1|AAK93219.1|  541|Drosophila melanogaster LD31064p
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 97  PNLIALQHIPLSPAGVIAKRPAPXALPNSCAP 192
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>AL033125-6|CAA21829.1|  510|Drosophila melanogaster EG:EG0007.7
           protein.
          Length = 510

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 97  PNLIALQHIPLSPAGVIAKRPAPXALPNSCAP 192
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 87  PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 118


>AE014298-602|AAF45923.3|  541|Drosophila melanogaster CG6121-PA
           protein.
          Length = 541

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 97  PNLIALQHIPLSPAGVIAKRPAPXALPNSCAP 192
           P   AL  IP +P G     P P  +PNS AP
Sbjct: 119 PGSGALAAIPQTPTGASGSVPPPAGIPNSVAP 150


>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 21/73 (28%), Positives = 31/73 (42%)
 Frame = -3

Query: 409  DGXSPFDVGVHVL**WTLVPNWNNTQPYXGLFF*FIRDFADFGLLVKK*ADLQKFNANFN 230
            DG  P D G+  +  + +  N +  Q + GL   F R   DF  L K   D+ K +  F 
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILKKDKPFK 982

Query: 229  KILTXTICHSPLQ 191
                  IC + L+
Sbjct: 983  FGSEEMICFNMLK 995


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,116,992
Number of Sequences: 53049
Number of extensions: 582999
Number of successful extensions: 1075
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3880595628
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)