Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0172.Seq
         (923 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    25   2.5  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   4.3  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   5.7  

>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 2.5
 Identities = 7/20 (35%), Positives = 17/20 (85%)
 Frame = -3

Query: 132 NMKNCTQYEKFILILVLILN 73
           N+K+C+ ++  +++LVL++N
Sbjct: 111 NIKSCSFFKSLLMVLVLLIN 130


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 4.3
 Identities = 10/45 (22%), Positives = 21/45 (46%)
 Frame = +1

Query: 427 WGMVDHKCRLPQGKIVGGSSKLNNMVHAEATFHIMQTGSTENTQM 561
           W  +D +  +P     GG   +N +++ + T+H  +   T  T +
Sbjct: 228 WMHIDGEMFMPGLPSAGGIMPINLLINGKGTYHDPKKNETTQTPL 272


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 5.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 86  TNIKMNFSYCVQFFIFSVCVHI 151
           TNIK    Y +QF +  VC+ I
Sbjct: 435 TNIKRRNPYTIQFSVPEVCMEI 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 934,571
Number of Sequences: 2352
Number of extensions: 18670
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100468593
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)