Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0172.Seq
(923 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase p... 34 0.63
U78723-1|AAF21463.1| 455|Homo sapiens putative G-protein couple... 32 2.6
CR628408-1|CAM28366.1| 455|Homo sapiens G protein-coupled recep... 32 2.6
BX537254-1|CAI18821.1| 455|Homo sapiens G protein-coupled recep... 32 2.6
BX511042-1|CAI13224.2| 455|Homo sapiens G protein-coupled recep... 32 2.6
BT006679-1|AAP35325.1| 455|Homo sapiens putative G-protein coup... 32 2.6
BC003187-1|AAH03187.1| 455|Homo sapiens G protein-coupled recep... 32 2.6
AY358966-1|AAQ89325.1| 455|Homo sapiens SH120 protein. 32 2.6
AL445591-1|CAH72386.1| 455|Homo sapiens G protein-coupled recep... 32 2.6
AL390725-1|CAI13712.2| 455|Homo sapiens G protein-coupled recep... 32 2.6
AK223223-1|BAD96943.1| 457|Homo sapiens G protein-coupled recep... 32 2.6
AF132947-1|AAD27722.1| 455|Homo sapiens CGI-13 protein protein. 32 2.6
AB097025-1|BAC77378.1| 455|Homo sapiens putative MAPK activatin... 32 2.6
AB097024-1|BAC77377.1| 455|Homo sapiens putative NFkB activatin... 32 2.6
>BC034502-1|AAH34502.1| 594|Homo sapiens choline dehydrogenase
protein.
Length = 594
Score = 34.3 bits (75), Expect = 0.63
Identities = 29/93 (31%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Frame = +1
Query: 256 AGSIIAHRIATETNYTYIVLEAGSK----GHGLLDIPVLSPF-----LHKSVYDWNYETS 408
AG ++A R+ + ++LEAG K G L + P L Y+W Y T
Sbjct: 51 AGCVLAGRLTEDPAERVLLLEAGPKDVRAGSKRLSWKIHMPAALVANLCDDRYNWCYHTE 110
Query: 409 PQENACWGMVDHKCRLPQGKIVGGSSKLNNMVH 507
Q G+ P+G++ GGSS LN MV+
Sbjct: 111 VQR----GLDGRVLYWPRGRVWGGSSSLNAMVY 139
>U78723-1|AAF21463.1| 455|Homo sapiens putative G-protein coupled
receptor protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>CR628408-1|CAM28366.1| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BX537254-1|CAI18821.1| 455|Homo sapiens G protein-coupled receptor
89B protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BX511042-1|CAI13224.2| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BT006679-1|AAP35325.1| 455|Homo sapiens putative G-protein coupled
receptor protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>BC003187-1|AAH03187.1| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AY358966-1|AAQ89325.1| 455|Homo sapiens SH120 protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AL445591-1|CAH72386.1| 455|Homo sapiens G protein-coupled receptor
89B protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AL390725-1|CAI13712.2| 455|Homo sapiens G protein-coupled receptor
89A protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AK223223-1|BAD96943.1| 457|Homo sapiens G protein-coupled receptor
89 variant protein.
Length = 457
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AF132947-1|AAD27722.1| 455|Homo sapiens CGI-13 protein protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AB097025-1|BAC77378.1| 455|Homo sapiens putative MAPK activating
protein protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
>AB097024-1|BAC77377.1| 455|Homo sapiens putative NFkB activating
protein protein.
Length = 455
Score = 32.3 bits (70), Expect = 2.6
Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 3/47 (6%)
Frame = +2
Query: 311 YWKQEARVMVYWIFLFLVPFYINRFMIGTMKHHHRKMLAGA---WLT 442
+WK V++ I +F+VPFYI F++ ++ H++ L + WLT
Sbjct: 74 HWKMNLCVILL-ILVFMVPFYIGYFIVSNIRLLHKQRLLFSCLLWLT 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,266,966
Number of Sequences: 237096
Number of extensions: 2708496
Number of successful extensions: 3498
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3412
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3498
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12047931574
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -