Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0164.Seq
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.2  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.2  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   4.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   4.2  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    22   7.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    22   7.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   7.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    21   9.7  

>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +3

Query: 21  VAWIYGNSSFTTRNMTIQYY*LCFVSIVSLVFGADVFYKILKP 149
           V+W Y   +     M  + + L   S + +    D FY +LKP
Sbjct: 117 VSW-YAGDAMCRIMMFFRMFGLYLSSFILVCISVDRFYAVLKP 158


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = +3

Query: 21  VAWIYGNSSFTTRNMTIQYY*LCFVSIVSLVFGADVFYKILKP 149
           V+W Y   +     M  + + L   S + +    D FY +LKP
Sbjct: 117 VSW-YAGDAMCRIMMFFRMFGLYLSSFILVCISVDRFYAVLKP 158


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 719 FDVGVPRSLIVDSCSKLEQHSTLSR 645
           FD  +P   +VDSCS ++     +R
Sbjct: 371 FDESLPGCHMVDSCSNIQTGEQFAR 395


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 719 FDVGVPRSLIVDSCSKLEQHSTLSR 645
           FD  +P   +VDSCS ++     +R
Sbjct: 378 FDESLPGCHMVDSCSNIQTGEQFAR 402


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 39  NSSFTTRNMTIQYY*LCFVSIVSLVFGAD 125
           NSSF   N+  Q   + +  + +L+ G D
Sbjct: 100 NSSFVVANVLFQLIHVYYTVVFTLLLGVD 128


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 39  NSSFTTRNMTIQYY*LCFVSIVSLVFGAD 125
           NSSF   N+  Q   + +  + +L+ G D
Sbjct: 100 NSSFVVANVLFQLIHVYYTVVFTLLLGVD 128


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +3

Query: 39  NSSFTTRNMTIQYY*LCFVSIVSLVFGAD 125
           NSSF   N+  Q   + +  + +L+ G D
Sbjct: 420 NSSFVVANVLFQLIHVYYTVVFTLLLGVD 448


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +1

Query: 733 VYXGRXATTWTITLIKVFGGRGA 801
           ++ G   TT+TI L+ +FG   A
Sbjct: 238 LFVGVIYTTYTIFLLLIFGSGSA 260


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 205,852
Number of Sequences: 336
Number of extensions: 4510
Number of successful extensions: 15
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)