Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0164.Seq
         (883 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    23   9.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    23   9.3  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +1

Query: 658 ECCSSLEQESTIKERGTPTSKGRKTVYXGRXATTWTITLIKVFGGRGAVKP*IRNPKXG 834
           E CS + Q     E    T     TVY  R AT  +I   +V    G  +P +  P+ G
Sbjct: 194 ERCSEIFQSIFTDEGLCCTFNTLDTVYMFRNATAPSIFPTEVGSSSGRFRPILWTPENG 252


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 409 NPGVTQLNRLAAHPPFASWRNS 474
           +PG     +L+ HPP AS R+S
Sbjct: 835 HPGAQTQPQLSQHPPGASGRSS 856


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 23.4 bits (48), Expect = 9.3
 Identities = 18/59 (30%), Positives = 24/59 (40%)
 Frame = +1

Query: 658 ECCSSLEQESTIKERGTPTSKGRKTVYXGRXATTWTITLIKVFGGRGAVKP*IRNPKXG 834
           E CS + Q     E    T     TVY  R AT  +I   +V    G  +P +  P+ G
Sbjct: 194 ERCSEIFQSIFTDEGLCCTFNTLDTVYMFRNATAPSIFPTEVGSSSGRFRPILWTPENG 252


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 902,597
Number of Sequences: 2352
Number of extensions: 17816
Number of successful extensions: 15
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 94680279
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)