Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0160.Seq
         (819 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ...    68   3e-10
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L...    67   4e-10
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet...    67   4e-10
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo...    67   6e-10
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ...    65   2e-09
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ...    64   5e-09
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:...    47   7e-04
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba...    45   0.003
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ...    40   0.057
UniRef50_UPI00015B5735 Cluster: PREDICTED: similar to ENSANGP000...    38   0.30 
UniRef50_UPI0000DB6EAE Cluster: PREDICTED: similar to bromodomai...    37   0.53 
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ...    35   2.1  
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp...    34   3.8  
UniRef50_A4RV98 Cluster: Predicted protein; n=2; Ostreococcus|Re...    34   5.0  
UniRef50_Q2UHD5 Cluster: Predicted protein; n=1; Aspergillus ory...    33   8.7  

>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
           SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
          Length = 73

 Score = 67.7 bits (158), Expect = 3e-10
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -2

Query: 653 TFAGFPRQALNRGXPLGFRFSALRHLDPKKL 561
           TFAGFPRQALNRG PLGFRFSALRHLDPKKL
Sbjct: 42  TFAGFPRQALNRGLPLGFRFSALRHLDPKKL 72


>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
           protein - Phage M13mp18
          Length = 102

 Score = 67.3 bits (157), Expect = 4e-10
 Identities = 35/55 (63%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = +1

Query: 163 LAVVLQRRDWENTGVTQXNRLAAHPXFASWR---IAKRPAPIALPNSCAXEWRMA 318
           LAVVLQRRDWEN GVTQ NRLAAHP FASWR    A+   P     S   EWR A
Sbjct: 26  LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80


>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
           Beta-galactosidase - Escherichia coli (strain K12)
          Length = 1024

 Score = 67.3 bits (157), Expect = 4e-10
 Identities = 35/55 (63%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = +1

Query: 163 LAVVLQRRDWENTGVTQXNRLAAHPXFASWR---IAKRPAPIALPNSCAXEWRMA 318
           LAVVLQRRDWEN GVTQ NRLAAHP FASWR    A+   P     S   EWR A
Sbjct: 8   LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62


>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
           Eukaryota|Rep: beta-galactosidase - Entamoeba
           histolytica HM-1:IMSS
          Length = 86

 Score = 66.9 bits (156), Expect = 6e-10
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = +2

Query: 161 HWPSFYNVVTGKTLALPXLIALQHIPXSPAG 253
           HWPSFYNVVTGKTLALP LIALQHIP SPAG
Sbjct: 5   HWPSFYNVVTGKTLALPNLIALQHIPLSPAG 35


>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
           Erwinia amylovora|Rep: Putative uncharacterized protein
           - Erwinia amylovora (Fire blight bacteria)
          Length = 123

 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 34/55 (61%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
 Frame = +1

Query: 163 LAVVLQRRDWENTGVTQXNRLAAHPXFASWR---IAKRPAPIALPNSCAXEWRMA 318
           LAVVLQRRDWEN GVTQ NRLAAHP FASWR    A+   P         EWR A
Sbjct: 68  LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122


>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
           organisms|Rep: LacZ-alpha peptide - Escherichia coli
          Length = 90

 Score = 63.7 bits (148), Expect = 5e-09
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +1

Query: 163 LAVVLQRRDWENTGVTQXNRLAAHPXFASWR 255
           LAVVLQRRDWEN GVTQ NRLAAHP FASWR
Sbjct: 22  LAVVLQRRDWENPGVTQLNRLAAHPPFASWR 52



 Score = 37.9 bits (84), Expect = 0.30
 Identities = 17/21 (80%), Positives = 17/21 (80%)
 Frame = +3

Query: 237 PFRQLANSEEARTDRPSQQLR 299
           PF    NSEEARTDRPSQQLR
Sbjct: 47  PFASWRNSEEARTDRPSQQLR 67


>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
           Beta-galactosidase - Yersinia pseudotuberculosis
          Length = 1066

 Score = 46.8 bits (106), Expect = 7e-04
 Identities = 19/31 (61%), Positives = 22/31 (70%)
 Frame = +1

Query: 163 LAVVLQRRDWENTGVTQXNRLAAHPXFASWR 255
           L  +L RRDWEN  +TQ +RL AHP F SWR
Sbjct: 15  LPQILSRRDWENPQITQYHRLEAHPPFHSWR 45


>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
           Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
           pneumoniae
          Length = 1034

 Score = 44.8 bits (101), Expect = 0.003
 Identities = 18/28 (64%), Positives = 19/28 (67%)
 Frame = +1

Query: 172 VLQRRDWENTGVTQXNRLAAHPXFASWR 255
           VL R DW N  +T  NRL AHP FASWR
Sbjct: 17  VLAREDWHNQTITHLNRLPAHPVFASWR 44


>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
           Enterobacter sakazakii ATCC BAA-894|Rep: Putative
           uncharacterized protein - Enterobacter sakazakii ATCC
           BAA-894
          Length = 1043

 Score = 40.3 bits (90), Expect = 0.057
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +1

Query: 163 LAVVLQRRDWENTGVTQXNRLAAHPXFASWRIAKR 267
           LA +L R DW+N  +T  NRL +H     WR A R
Sbjct: 18  LATILARNDWQNPAITSVNRLPSHTPLHGWRDADR 52


>UniRef50_UPI00015B5735 Cluster: PREDICTED: similar to
           ENSANGP00000016848; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000016848 - Nasonia
           vitripennis
          Length = 947

 Score = 37.9 bits (84), Expect = 0.30
 Identities = 16/24 (66%), Positives = 20/24 (83%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIEAP 39
           QTLE+LFL ++AQM KEE E+E P
Sbjct: 289 QTLERLFLTKVAQMPKEEVELEPP 312


>UniRef50_UPI0000DB6EAE Cluster: PREDICTED: similar to bromodomain
           containing 3; n=1; Apis mellifera|Rep: PREDICTED:
           similar to bromodomain containing 3 - Apis mellifera
          Length = 935

 Score = 37.1 bits (82), Expect = 0.53
 Identities = 16/24 (66%), Positives = 19/24 (79%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIEAP 39
           Q LEKLFL ++AQM KEE E+E P
Sbjct: 216 QALEKLFLTKVAQMPKEEVELEPP 239


>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 275

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +2

Query: 113 GGARYPIRPIVSRIT 157
           GGARYPIRPIVSRIT
Sbjct: 261 GGARYPIRPIVSRIT 275


>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
           spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
           spumigena CCY 9414
          Length = 72

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 15/15 (100%), Positives = 15/15 (100%)
 Frame = +3

Query: 255 NSEEARTDRPSQQLR 299
           NSEEARTDRPSQQLR
Sbjct: 49  NSEEARTDRPSQQLR 63


>UniRef50_A4RV98 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
           Predicted protein - Ostreococcus lucimarinus CCE9901
          Length = 547

 Score = 33.9 bits (74), Expect = 5.0
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = -1

Query: 258 YSPAGEXGMCCKAIXLGNASVFPVTTL*NDGQ*IVI-RLTIGRIGYRAPPSNFGEALLEP 82
           Y P     +C K I  G+A       L  DG+ I I R T GR G R P +    AL EP
Sbjct: 392 YFPKRVASLCGKCIVAGDAGAHHSLFLTGDGKIIAIGRYTDGRCGVRVPNAALDGALEEP 451


>UniRef50_Q2UHD5 Cluster: Predicted protein; n=1; Aspergillus
           oryzae|Rep: Predicted protein - Aspergillus oryzae
          Length = 148

 Score = 33.1 bits (72), Expect = 8.7
 Identities = 21/58 (36%), Positives = 28/58 (48%)
 Frame = -1

Query: 207 NASVFPVTTL*NDGQ*IVIRLTIGRIGYRAPPSNFGEALLEPDSTNGQRRERNRSTLE 34
           + ++  V T  N  + I +RLT GR+G R      G +   PD T GQR  R  S  E
Sbjct: 31  SGTIADVLTRGNHPRGIKVRLTDGRVG-RVQSMGTGGSCPPPDPTQGQRTRRTTSEAE 87


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,482,151
Number of Sequences: 1657284
Number of extensions: 12680169
Number of successful extensions: 25190
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 24451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25155
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 71200899835
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)