Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0160.Seq
         (819 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M23222-1|AAA28541.1| 1110|Drosophila melanogaster fsh protein.         32   1.1  
M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.         32   1.1  
BT015270-1|AAT94499.1| 1110|Drosophila melanogaster LD26482p pro...    32   1.1  
AE014298-1111|AAS65279.1| 1110|Drosophila melanogaster CG2252-PE...    32   1.1  
AE014298-1110|AAS65278.1| 1110|Drosophila melanogaster CG2252-PD...    32   1.1  
AE014298-1109|AAS65277.1| 1110|Drosophila melanogaster CG2252-PC...    32   1.1  
AE014298-1108|AAN09226.1| 1110|Drosophila melanogaster CG2252-PA...    32   1.1  
AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB...    32   1.1  

>M23222-1|AAA28541.1| 1110|Drosophila melanogaster fsh protein.
          Length = 1110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>M23221-1|AAA28540.1| 2038|Drosophila melanogaster fsh protein.
          Length = 2038

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>BT015270-1|AAT94499.1| 1110|Drosophila melanogaster LD26482p
           protein.
          Length = 1110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>AE014298-1111|AAS65279.1| 1110|Drosophila melanogaster CG2252-PE,
           isoform E protein.
          Length = 1110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>AE014298-1110|AAS65278.1| 1110|Drosophila melanogaster CG2252-PD,
           isoform D protein.
          Length = 1110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>AE014298-1109|AAS65277.1| 1110|Drosophila melanogaster CG2252-PC,
           isoform C protein.
          Length = 1110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>AE014298-1108|AAN09226.1| 1110|Drosophila melanogaster CG2252-PA,
           isoform A protein.
          Length = 1110

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


>AE014298-1107|AAF46312.3| 2038|Drosophila melanogaster CG2252-PB,
           isoform B protein.
          Length = 2038

 Score = 31.9 bits (69), Expect = 1.1
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -2

Query: 110 QTLEKLFLNRIAQMDKEEKEIE 45
           QTLEK+FL +I  M KEE E+E
Sbjct: 127 QTLEKVFLQKIESMPKEELELE 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,349,930
Number of Sequences: 53049
Number of extensions: 578852
Number of successful extensions: 948
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3860063376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)