Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0158.Seq
(847 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P75764 Cluster: Uncharacterized protein ybhJ; n=32; Bac... 164 2e-39
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 63 7e-09
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 62 2e-08
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 62 2e-08
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 60 7e-08
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 60 7e-08
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 44 0.006
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.045
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.079
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 39 0.14
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.55
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.3
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 35 2.2
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 35 2.2
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 35 2.2
UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1; ... 34 3.9
UniRef50_Q2KAD5 Cluster: Putative signal-transducer protein; n=2... 33 9.0
>UniRef50_P75764 Cluster: Uncharacterized protein ybhJ; n=32;
Bacteria|Rep: Uncharacterized protein ybhJ - Escherichia
coli (strain K12)
Length = 753
Score = 164 bits (399), Expect = 2e-39
Identities = 81/93 (87%), Positives = 83/93 (89%)
Frame = -2
Query: 279 IGCAD*QYLLKVCSKILDEVTTTDELIPXGETSSYRSNPIGLAEFTXSRRDPGYXSRSKA 100
+G +LKVCSKILDEVTTTDELIP GETSSYRSNPIGLAEFT SRRDPGY SRSKA
Sbjct: 530 LGALTDNIVLKVCSKILDEVTTTDELIPSGETSSYRSNPIGLAEFTLSRRDPGYVSRSKA 589
Query: 99 TAELENQRLXGNVSELTEVFARIKQIAGQEHID 1
TAELENQRL GNVSELTEVFARIKQIAGQEHID
Sbjct: 590 TAELENQRLAGNVSELTEVFARIKQIAGQEHID 622
Score = 92.3 bits (219), Expect = 1e-17
Identities = 40/41 (97%), Positives = 40/41 (97%)
Frame = -3
Query: 377 DVTPYKNRVYQGFVKGATXQPLIYGPNIKDWPELGALTDNI 255
DVTPYKNRVYQGFVKGAT QPLIYGPNIKDWPELGALTDNI
Sbjct: 497 DVTPYKNRVYQGFVKGATQQPLIYGPNIKDWPELGALTDNI 537
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 63.3 bits (147), Expect = 7e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +2
Query: 428 HWPSFYNVVTGKTLALPNLIALQHIPL 508
HWPSFYNVVTGKTLALPNLIALQHIPL
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPL 31
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/55 (60%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +1
Query: 430 LAVVLQRRDWENPGVTQLNRLAAHPPSPA---GVIAKRPAPIALPNSCAXEWRMA 585
LAVVLQRRDWENPGVTQLNRLAAHPP + A+ P S EWR A
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 62.1 bits (144), Expect = 2e-08
Identities = 33/55 (60%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Frame = +1
Query: 430 LAVVLQRRDWENPGVTQLNRLAAHPPSPA---GVIAKRPAPIALPNSCAXEWRMA 585
LAVVLQRRDWENPGVTQLNRLAAHPP + A+ P S EWR A
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 430 LAVVLQRRDWENPGVTQLNRLAAHPP 507
LAVVLQRRDWENPGVTQLNRLAAHPP
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPP 93
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 504 PFASWRNSEEARTDRPSQQLR 566
PFASWRNSEEARTDRPSQQLR
Sbjct: 93 PFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 60.1 bits (139), Expect = 7e-08
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = +1
Query: 430 LAVVLQRRDWENPGVTQLNRLAAHPP 507
LAVVLQRRDWENPGVTQLNRLAAHPP
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPP 47
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/21 (100%), Positives = 21/21 (100%)
Frame = +3
Query: 504 PFASWRNSEEARTDRPSQQLR 566
PFASWRNSEEARTDRPSQQLR
Sbjct: 47 PFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 43.6 bits (98), Expect = 0.006
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +1
Query: 430 LAVVLQRRDWENPGVTQLNRLAAHPP 507
L +L RRDWENP +TQ +RL AHPP
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPP 40
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.045
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 516 WRNSEEARTDRPSQQLR 566
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 39.9 bits (89), Expect = 0.079
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +1
Query: 430 LAVVLQRRDWENPGVTQLNRLAAHPP 507
LA +L R DW+NP +T +NRL +H P
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTP 43
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.1 bits (87), Expect = 0.14
Identities = 23/34 (67%), Positives = 24/34 (70%)
Frame = -3
Query: 587 FAIRHSXAQLLGRAIGAGLFAITPAGEGGCAARR 486
FAI+ AQLLGRAIGAGLFAITP E G R
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELGTPESR 43
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 0.55
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 377 RGGARYPIRPIVSRIT 424
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.3
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 439 VLQRRDWENPGVTQLNRLAAHPP 507
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 35.1 bits (77), Expect = 2.2
Identities = 21/48 (43%), Positives = 26/48 (54%)
Frame = +1
Query: 433 AVVLQRRDWENPGVTQLNRLAAHPPSPAGVIAKRPAPIALPNSCAXEW 576
A L+RR+ +NPG QLN L A P P G K+ AP PN + W
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKK-AP---PNRLSKNW 100
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 35.1 bits (77), Expect = 2.2
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 439 VLQRRDWENPGVTQLNRLAAHPP 507
++ RRDWENP Q+N++ AH P
Sbjct: 7 IINRRDWENPITVQVNQVKAHSP 29
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 35.1 bits (77), Expect = 2.2
Identities = 14/22 (63%), Positives = 15/22 (68%)
Frame = +1
Query: 439 VLQRRDWENPGVTQLNRLAAHP 504
VL R DW N +T LNRL AHP
Sbjct: 17 VLAREDWHNQTITHLNRLPAHP 38
>UniRef50_A2VBJ9 Cluster: Non-ribosomal peptide synthetase; n=1;
uncultured bacterium|Rep: Non-ribosomal peptide
synthetase - uncultured bacterium
Length = 338
Score = 34.3 bits (75), Expect = 3.9
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = -3
Query: 479 WVTPGFSQSRRCKTTASEL*YDSL*GELGTGPPLDV 372
W GF C YDSL GELGTGPPL+V
Sbjct: 260 WSKTGFRPF--CLEAGRRAYYDSLYGELGTGPPLEV 293
>UniRef50_Q2KAD5 Cluster: Putative signal-transducer protein; n=2;
Rhizobium|Rep: Putative signal-transducer protein -
Rhizobium etli (strain CFN 42 / ATCC 51251)
Length = 634
Score = 33.1 bits (72), Expect = 9.0
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = -2
Query: 213 TDELIPXGETSSYRSNPIGLAEFTXSRRDPGYXSRSKATAELENQRLXGNVSELTEVFAR 34
T+ ++ G + R + +A + D RS T + ENQ L GN+S L + F
Sbjct: 12 TEAVMADGSIDAQRLMELVIATYRGHESDYDIIERSAETLQRENQALKGNMSALNQAFDG 71
Query: 33 IKQI 22
K++
Sbjct: 72 QKRL 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 816,107,468
Number of Sequences: 1657284
Number of extensions: 15991677
Number of successful extensions: 35819
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 34461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35804
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74193458591
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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