Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0158.Seq
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   1.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    24   1.7  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    22   5.3  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   7.0  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.3  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 490 LAAHPPSPAGVIAKRPAPIALPNSCA 567
           L+  P  P GV  KR  P AL  +CA
Sbjct: 48  LSKGPCPPQGVDLKRVLPEALQTNCA 73


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -2

Query: 270 AD*QYLLKVCSKILDEVTTTDELIPXGETSSY 175
           AD  Y+  VC   + EV+   ELI   ET+ +
Sbjct: 644 ADVFYICHVCCSTIHEVSKAGELIHKIETNDH 675


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = +1

Query: 508 SPAGVIAKRPAPIALPNSCA 567
           +P G   KR  P AL N CA
Sbjct: 54  TPEGEELKRDIPEALQNECA 73


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +1

Query: 508 SPAGVIAKRPAPIALPNSCA 567
           +P+G   K+  P AL N CA
Sbjct: 52  TPSGEELKKDIPDALKNECA 71


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -2

Query: 393 YRAPPRCNAV*KPCLSGLCERGNS 322
           YR   +  +   PC +  CE GN+
Sbjct: 680 YRQEAQWTSSDNPCTTCFCENGNN 703


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,129
Number of Sequences: 336
Number of extensions: 3827
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)