Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0158.Seq
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory pr...    24   6.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   8.8  

>AJ000502-1|CAA04136.1|  299|Anopheles gambiae iron regulatory
           protein protein.
          Length = 299

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
 Frame = +1

Query: 442 LQRRDWENPGVTQLNRLAAHPPSPAGVIAKRPAPIALPNSCAXEWRM---ANCKRXYFVK 612
           + R +    G+  L  LA       G+  +    IA+P SC    R+    +C + + V 
Sbjct: 213 IHRSNLVGMGIVPLQYLAGQNAESLGLTGQELFSIAIPESCKPHERIPVSTDCGKQFEVI 272

Query: 613 IR 618
           +R
Sbjct: 273 VR 274


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +1

Query: 496  AHPPSPAGVIAKRPAPIAL 552
            A P SPAGV+  +  P+A+
Sbjct: 1338 AAPSSPAGVLVAKVPPVAV 1356


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,660
Number of Sequences: 2352
Number of extensions: 16429
Number of successful extensions: 23
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)