Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0155.Seq
         (948 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    25   1.1  
U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   8.0  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   8.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   8.0  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   8.0  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 667 CYQMFLASTFANLFFRCVHG 608
           C Q F+     + ++RCVHG
Sbjct: 478 CKQDFMPHELCDKYYRCVHG 497



 Score = 22.6 bits (46), Expect = 4.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -1

Query: 570 PRPAWSLPPS 541
           PRP W+ PPS
Sbjct: 408 PRPEWARPPS 417


>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -1

Query: 141 YKWGIAYRAPPERFLRIHQCQTTKS 67
           Y W   YR   +R      CQ TKS
Sbjct: 156 YYWPNMYRTIKKRLRSCDLCQKTKS 180


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 48  LALIPLVILWFGIDESAKIFL 110
           +  I +VI W+ ++ S  IFL
Sbjct: 258 IVYIIVVIFWYTVNASTNIFL 278


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 48  LALIPLVILWFGIDESAKIFL 110
           +  I +VI W+ ++ S  IFL
Sbjct: 258 IVYIIVVIFWYTVNASTNIFL 278


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 7/29 (24%), Positives = 11/29 (37%)
 Frame = +1

Query: 202 WIIRHTAVYPCDALTENQKRCVAMCIKRS 288
           W + H  +YP    T     C    +K +
Sbjct: 235 WFLPHQPIYPAVTATVQLSTCTRTTLKNN 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,049
Number of Sequences: 336
Number of extensions: 5348
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26685714
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)