Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0155.Seq
         (948 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    29   0.21 
EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle...    27   1.1  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       24   5.8  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    24   7.7  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 29.1 bits (62), Expect = 0.21
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -3

Query: 697 FTYSNAIKIFCYQMFLASTFANLFFRCV-HGTVILARTLPLTCTT 566
           F+ +N  +IFC+ +   STF N+   C+   + +LA   PL   +
Sbjct: 839 FSPTNRFRIFCHWLCNHSTFGNIILVCIMFSSAMLAAEDPLNANS 883


>EF382662-1|ABN54495.1|  178|Anopheles gambiae CPF family cuticle
           protein protein.
          Length = 178

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -1

Query: 132 GIAYRAPPERFLRIHQCQTTKSPAGSAPDAARCATSELRYPAA 4
           G AY AP  ++          +PA   P AA  A   + YPAA
Sbjct: 77  GYAYAAPAVKYAAPAYAAHYAAPAVHYPAAAHYAAPAVHYPAA 119


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 24.2 bits (50), Expect = 5.8
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = -3

Query: 595 ARTLPLTCTTTSVESSTI 542
           A+T PLT TTTS E   +
Sbjct: 502 AKTTPLTTTTTSTEEPAL 519


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
 Frame = -2

Query: 704 KSLYVQ*RHQDILLPDVPGQHVREPVLPLRPRNGDFGTDFTVNLHH-DQRGVFHHRF 537
           K LY Q    D++        V  P   L  RN +    FT    H DQR   HHRF
Sbjct: 38  KQLYAQIMGHDLV------DSVSVPKEGLNTRNANTVRSFTHEESHIDQRFQHHHRF 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,042,665
Number of Sequences: 2352
Number of extensions: 22825
Number of successful extensions: 57
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 57
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103776201
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)