Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0148.Seq
         (806 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bomb...    35   2.1  
UniRef50_Q4X8P6 Cluster: Putative uncharacterized protein; n=1; ...    34   4.8  
UniRef50_Q7RT39 Cluster: MIF4G domain, putative; n=3; Plasmodium...    33   6.4  
UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena pigment...    33   6.4  
UniRef50_Q9C5U2 Cluster: Histidine kinase; n=29; Magnoliophyta|R...    33   8.5  
UniRef50_Q8IHX3 Cluster: Putative uncharacterized protein; n=4; ...    33   8.5  
UniRef50_Q5WRN2 Cluster: Putative uncharacterized protein srz-97...    33   8.5  
UniRef50_A3LRZ3 Cluster: Glucosyltransferase; n=1; Pichia stipit...    33   8.5  

>UniRef50_A1XDB3 Cluster: STIP; n=1; Bombyx mori|Rep: STIP - Bombyx
           mori (Silk moth)
          Length = 782

 Score = 35.1 bits (77), Expect = 2.1
 Identities = 12/14 (85%), Positives = 13/14 (92%)
 Frame = -2

Query: 622 WYLPVRTHKRSYHQ 581
           WYLP RTHKRSYH+
Sbjct: 572 WYLPARTHKRSYHR 585


>UniRef50_Q4X8P6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 264

 Score = 33.9 bits (74), Expect = 4.8
 Identities = 17/47 (36%), Positives = 24/47 (51%)
 Frame = -3

Query: 267 KILLSSIYKFLIHIYLTNFKFFNII*EKKTFFQSGIFPHNRKFLIHY 127
           K L S+IY  L +I L N+ F+N +  K   F +       K +IHY
Sbjct: 70  KALSSNIYISLFYILLKNYYFYNTVLPKYNVFNADSLDETIKTIIHY 116


>UniRef50_Q7RT39 Cluster: MIF4G domain, putative; n=3; Plasmodium
           (Vinckeia)|Rep: MIF4G domain, putative - Plasmodium
           yoelii yoelii
          Length = 995

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
 Frame = -3

Query: 348 KYLVFLRFTLSEHFLVNLMRNYDNY-LFKIL-LSSIYKFLIHIYLTNFKFFNII 193
           K  VFL F+L    ++N ++N +NY L KIL LS ++ FL+   L NFK F  I
Sbjct: 835 KNRVFL-FSLKT-IVINFIKNINNYDLKKILFLSKLFIFLLKENLINFKIFKFI 886


>UniRef50_Q09F14 Cluster: Heme maturase; n=1; Tetrahymena
           pigmentosa|Rep: Heme maturase - Tetrahymena pigmentosa
          Length = 522

 Score = 33.5 bits (73), Expect = 6.4
 Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
 Frame = -3

Query: 321 LSEHFLVNLMRNYDN----YLFKILLSSIYKFLIHIYLT--NFKFFNII 193
           LS++FL   +  Y+N    Y++ +LL+ IY F I+IY+   N K F II
Sbjct: 473 LSKYFLTYWLELYNNNKYIYIYLLLLNYIYIFYIYIYMNICNNKIFKII 521


>UniRef50_Q9C5U2 Cluster: Histidine kinase; n=29; Magnoliophyta|Rep:
           Histidine kinase - Arabidopsis thaliana (Mouse-ear
           cress)
          Length = 1176

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 552 CLFKRVLPIPWTIITSTVLI 493
           C FK  LPIPWT IT ++L+
Sbjct: 527 CRFKHKLPIPWTAITPSILV 546


>UniRef50_Q8IHX3 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 383

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
 Frame = -3

Query: 363 KE*LIKYLVFLRFTLSEHFLVNLMRNYDNYLFKI------LLSSIYKFLIHIYLTNFKFF 202
           K+  I  + F   +L +H   NL++NY+N  +KI      L   I  FL  + L N  FF
Sbjct: 207 KDIKISLIKFTYASLYKHIWKNLLKNYENIEYKIQHKMAYLRKDISAFLKKVQLENISFF 266

Query: 201 NI 196
           +I
Sbjct: 267 HI 268


>UniRef50_Q5WRN2 Cluster: Putative uncharacterized protein srz-97;
           n=1; Caenorhabditis elegans|Rep: Putative
           uncharacterized protein srz-97 - Caenorhabditis elegans
          Length = 320

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 18/51 (35%), Positives = 32/51 (62%)
 Frame = -3

Query: 351 IKYLVFLRFTLSEHFLVNLMRNYDNYLFKILLSSIYKFLIHIYLTNFKFFN 199
           IKYL+ L+F+ S+ FL+NL++     L  +L+S  +  L   YL + ++F+
Sbjct: 125 IKYLLTLKFSNSQIFLLNLVKK----LNVVLISKDFLLLFLCYLNSIQYFS 171


>UniRef50_A3LRZ3 Cluster: Glucosyltransferase; n=1; Pichia
           stipitis|Rep: Glucosyltransferase - Pichia stipitis
           (Yeast)
          Length = 465

 Score = 33.1 bits (72), Expect = 8.5
 Identities = 19/53 (35%), Positives = 32/53 (60%)
 Frame = -3

Query: 351 IKYLVFLRFTLSEHFLVNLMRNYDNYLFKILLSSIYKFLIHIYLTNFKFFNII 193
           IKY++   FT+   FL+   R+Y  Y+FK L+S    ++I + L +F  ++II
Sbjct: 320 IKYVID-NFTVVHPFLLADNRHYTFYIFKRLISHPKSYIIAVPLYHFATYSII 371


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,440,889
Number of Sequences: 1657284
Number of extensions: 11676900
Number of successful extensions: 21754
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 21015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21748
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 69554636255
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)