Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0148.Seq
         (806 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to hi...    33   0.22 
At5g61190.1 68418.m07676 zinc finger protein-related contains Pf...    28   8.4  

>At5g35750.1 68418.m04281 histidine kinase (AHK2) identical to
           histidine kinase AHK2 [Arabidopsis thaliana]
           gi|13537196|dbj|BAB40774
          Length = 1176

 Score = 33.1 bits (72), Expect = 0.22
 Identities = 12/20 (60%), Positives = 15/20 (75%)
 Frame = -3

Query: 552 CLFKRVLPIPWTIITSTVLI 493
           C FK  LPIPWT IT ++L+
Sbjct: 527 CRFKHKLPIPWTAITPSILV 546


>At5g61190.1 68418.m07676 zinc finger protein-related contains Pfam
           profile PF04396: Protein of unknown function DUF537,
           weak hit to PF00096: Zinc finger C2H2 type
          Length = 977

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -3

Query: 477 REPLDSVKHWILTFLKRLP*ALNGKF*F 394
           +EPL S K W+ T  K++P   NG+F F
Sbjct: 595 KEPLPSTKDWVETLNKQIP---NGEFFF 619


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,519,940
Number of Sequences: 28952
Number of extensions: 255492
Number of successful extensions: 388
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1833827200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)