Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0147.Seq
         (710 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49889-6|CAA90069.2|  435|Caenorhabditis elegans Hypothetical pr...    37   0.016
Z49887-7|CAA90060.2|  435|Caenorhabditis elegans Hypothetical pr...    37   0.016

>Z49889-6|CAA90069.2|  435|Caenorhabditis elegans Hypothetical
           protein T06H11.4 protein.
          Length = 435

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = +1

Query: 301 EADYTKTILEELG-EIAFWKLAIKPGKPFAFGKLSNSW------FCGLPGNPVSATLTFY 459
           E DY K  L  LG +I F ++++KPG P       ++          LPGNP SA +  +
Sbjct: 271 EQDYMKNALLHLGFKIEFGRVSMKPGLPCTVATRESASERKLKVVLALPGNPASAWVCSH 330

Query: 460 QLVQPLLAKLSG 495
               PL+  +SG
Sbjct: 331 LFAVPLIRDMSG 342


>Z49887-7|CAA90060.2|  435|Caenorhabditis elegans Hypothetical
           protein T06H11.4 protein.
          Length = 435

 Score = 36.7 bits (81), Expect = 0.016
 Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 7/72 (9%)
 Frame = +1

Query: 301 EADYTKTILEELG-EIAFWKLAIKPGKPFAFGKLSNSW------FCGLPGNPVSATLTFY 459
           E DY K  L  LG +I F ++++KPG P       ++          LPGNP SA +  +
Sbjct: 271 EQDYMKNALLHLGFKIEFGRVSMKPGLPCTVATRESASERKLKVVLALPGNPASAWVCSH 330

Query: 460 QLVQPLLAKLSG 495
               PL+  +SG
Sbjct: 331 LFAVPLIRDMSG 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,154,762
Number of Sequences: 27780
Number of extensions: 330667
Number of successful extensions: 971
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)