Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0147.Seq
(710 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 24 1.6
DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly pro... 23 3.8
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 21 8.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 21 8.7
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 23.8 bits (49), Expect = 1.6
Identities = 19/73 (26%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = -2
Query: 622 VTSSFAIGVALQH-----AALEIKTSWRFFQAGR-----CAVXWRAGRRWRCYRLVLPAK 473
VT+ F + +A+ A L +W F+ C++ W A W C +L
Sbjct: 99 VTNMFIVSLAVADLMVGLAVLPFSATWEVFKVWIFGDLWCSI-WLAVDVWMCTASILNLC 157
Query: 472 AVPVDRRSASLKP 434
A+ +DR A +P
Sbjct: 158 AISLDRYLAVTRP 170
>DQ000307-1|AAY21180.1| 423|Apis mellifera major royal jelly
protein 9 protein.
Length = 423
Score = 22.6 bits (46), Expect = 3.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 661 LASATALSCWNAIR 702
L S TAL CWN R
Sbjct: 318 LVSDTALGCWNENR 331
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 31 QILTTNAWLKLE 42
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 31 QILTTNAWLKLE 42
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 31 QILTTNAWLKLE 42
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 31 QILTTNAWLKLE 42
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 31 QILTTNAWLKLE 42
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 31 QILTTNAWLKLE 42
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 99 QILTTNAWLKLE 110
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.6
Identities = 6/12 (50%), Positives = 12/12 (100%)
Frame = -1
Query: 281 ELITTSAWLRLQ 246
+++TT+AWL+L+
Sbjct: 99 QILTTNAWLKLE 110
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -1
Query: 56 SPELRQSPDSCSPGDPL 6
+PE+ Q+ ++C P PL
Sbjct: 103 TPEVHQAINTCQPSIPL 119
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 21.4 bits (43), Expect = 8.7
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +1
Query: 130 PNLRYQPSRRTPDVRTVGMRGN*LRDYPRRSPCPARR 240
P + + +RT + MRG P SP PA +
Sbjct: 714 PRMTAEQLKRTDIIHNYIMRGEASPRSPNASPSPAEQ 750
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,920
Number of Sequences: 438
Number of extensions: 3868
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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