Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0143.Seq
(967 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P75857 Cluster: Uncharacterized outer membrane usher pr... 144 3e-33
UniRef50_Q8ZQM2 Cluster: Glutathione transport system permease p... 108 2e-22
UniRef50_P72211 Cluster: Outer membrane usher protein; n=1; Prot... 105 1e-21
UniRef50_UPI00005F7ED2 Cluster: COG3188: P pilus assembly protei... 102 1e-20
UniRef50_P43662 Cluster: Outer membrane usher protein lpfC precu... 101 3e-20
UniRef50_Q1R5K1 Cluster: Outer membrane usher protein AufC; n=5;... 101 4e-20
UniRef50_P37924 Cluster: Outer membrane usher protein fimD precu... 100 6e-20
UniRef50_A0IJZ5 Cluster: Fimbrial biogenesis outer membrane ushe... 100 1e-19
UniRef50_A1JKX5 Cluster: Outer membrane usher protein precursor;... 95 2e-18
UniRef50_A6TGZ4 Cluster: Putative outer membrane usher protein; ... 95 2e-18
UniRef50_A6T931 Cluster: Putative fimbrial biogenesis outer memb... 95 3e-18
UniRef50_Q8ZRR6 Cluster: Putativie fimbrial usher; n=2; Salmonel... 94 4e-18
UniRef50_Q8ZJU1 Cluster: Putative fimbrial usher protein; n=3; S... 94 4e-18
UniRef50_A6TH60 Cluster: Putative fimbrial biogenesis outer memb... 94 4e-18
UniRef50_A7ME55 Cluster: Putative uncharacterized protein; n=1; ... 93 1e-17
UniRef50_A6TCS3 Cluster: Putative export and assembly of type 1 ... 93 1e-17
UniRef50_Q62KN8 Cluster: Outer membrane usher protein; n=15; Bur... 92 2e-17
UniRef50_UPI00015C6227 Cluster: hypothetical protein CKO_04372; ... 91 3e-17
UniRef50_A4WBN9 Cluster: Fimbrial biogenesis outer membrane ushe... 89 2e-16
UniRef50_P46009 Cluster: Outer membrane usher protein focD precu... 89 2e-16
UniRef50_P42915 Cluster: Uncharacterized outer membrane usher pr... 87 5e-16
UniRef50_A4Y249 Cluster: Fimbrial biogenesis outer membrane ushe... 87 6e-16
UniRef50_A3I8F4 Cluster: ABC transporter, membrane spanning prot... 87 6e-16
UniRef50_A1RPW6 Cluster: Fimbrial biogenesis outer membrane ushe... 87 6e-16
UniRef50_UPI00005F80A3 Cluster: COG3188: P pilus assembly protei... 87 8e-16
UniRef50_Q0HR82 Cluster: Fimbrial biogenesis outer membrane ushe... 87 8e-16
UniRef50_Q7AFL4 Cluster: Putative outer membrane usher protein; ... 85 2e-15
UniRef50_UPI00015C61E6 Cluster: hypothetical protein CKO_04363; ... 85 3e-15
UniRef50_UPI00005F9F29 Cluster: COG3188: P pilus assembly protei... 85 3e-15
UniRef50_P45997 Cluster: Outer membrane usher protein hifC precu... 84 4e-15
UniRef50_A0VDM5 Cluster: Fimbrial biogenesis outer membrane ushe... 84 6e-15
UniRef50_Q1LQW6 Cluster: Fimbrial biogenesis outer membrane ushe... 83 8e-15
UniRef50_UPI00005F9B12 Cluster: COG3188: P pilus assembly protei... 83 1e-14
UniRef50_A4TJY7 Cluster: Fimbrial usher protein precursor; n=13;... 83 1e-14
UniRef50_Q7N9P7 Cluster: Similar to outer membrane usher protein... 82 2e-14
UniRef50_A7MJW8 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q7CKZ7 Cluster: Outer membrane usher protein FIMD; n=12... 82 2e-14
UniRef50_Q31G29 Cluster: ATP-binding cassette superfamily transp... 82 2e-14
UniRef50_Q8VPB7 Cluster: LpfC; n=10; Enterobacteriaceae|Rep: Lpf... 81 3e-14
UniRef50_Q7NYH8 Cluster: Outer membrane usher protein; n=1; Chro... 81 4e-14
UniRef50_Q5PDB3 Cluster: Outer membrane usher protein; n=2; Ente... 81 4e-14
UniRef50_A0THS4 Cluster: Fimbrial biogenesis outer membrane ushe... 81 6e-14
UniRef50_Q7N8E3 Cluster: Similar to outer membrane usher protein... 80 1e-13
UniRef50_Q5PL29 Cluster: Probable outer membrane fimbrial usher ... 79 2e-13
UniRef50_A6W3S2 Cluster: Binding-protein-dependent transport sys... 78 3e-13
UniRef50_A6X5K5 Cluster: Binding-protein-dependent transport sys... 78 4e-13
UniRef50_A6TDX6 Cluster: Putative fimbrial biogenesis outer memb... 78 4e-13
UniRef50_Q8TKE4 Cluster: ABC transporter, permease protein; n=4;... 78 4e-13
UniRef50_Q9I4X5 Cluster: Usher CupC3; n=8; Proteobacteria|Rep: U... 77 5e-13
UniRef50_UPI00015C63E2 Cluster: hypothetical protein CKO_05122; ... 77 7e-13
UniRef50_Q9PH65 Cluster: Outer membrane usher protein; n=5; Xant... 77 7e-13
UniRef50_Q6FFQ9 Cluster: Putative outer membrane usher protein; ... 77 7e-13
UniRef50_Q1ZU82 Cluster: Putative fimbrial usher protein; n=1; V... 77 7e-13
UniRef50_A0IPA4 Cluster: Fimbrial biogenesis outer membrane ushe... 77 7e-13
UniRef50_A7MQC5 Cluster: Putative uncharacterized protein; n=1; ... 77 9e-13
UniRef50_A0GEL0 Cluster: Fimbrial biogenesis outer membrane ushe... 77 9e-13
UniRef50_Q28JR5 Cluster: Binding-protein-dependent transport sys... 76 1e-12
UniRef50_Q11EZ9 Cluster: Binding-protein-dependent transport sys... 76 1e-12
UniRef50_Q8TJ82 Cluster: Oligopeptide ABC transporter, permease ... 76 1e-12
UniRef50_P33341 Cluster: Uncharacterized outer membrane usher pr... 76 1e-12
UniRef50_Q2L0Z7 Cluster: Putative fimbrial usher precursor; n=1;... 76 2e-12
UniRef50_Q0JZF2 Cluster: Outer membrane fimbrial usher porin, FU... 76 2e-12
UniRef50_A6T5S2 Cluster: Putative outer membrane protein; n=1; K... 76 2e-12
UniRef50_Q8TTX4 Cluster: Oligopeptide ABC transporter, permease ... 76 2e-12
UniRef50_UPI00005FA14E Cluster: COG3188: P pilus assembly protei... 75 2e-12
UniRef50_Q9KGM9 Cluster: Oligopeptide ABC transporter; n=8; Firm... 75 2e-12
UniRef50_A6AJW5 Cluster: Outer membrane fimbrial usher protein; ... 75 2e-12
UniRef50_Q47198 Cluster: Transmembrane protein; n=5; Escherichia... 75 3e-12
UniRef50_A1JTM9 Cluster: Outer membrane usher protein precursor;... 75 3e-12
UniRef50_A0IM58 Cluster: Fimbrial biogenesis outer membrane ushe... 75 3e-12
UniRef50_Q8ENN1 Cluster: Dipeptide ABC transporter permease; n=3... 75 4e-12
UniRef50_Q1LMT0 Cluster: Fimbrial biogenesis outer membrane ushe... 75 4e-12
UniRef50_A7ML89 Cluster: Putative uncharacterized protein; n=1; ... 74 5e-12
UniRef50_A5WGG6 Cluster: Fimbrial biogenesis outer membrane ushe... 74 5e-12
UniRef50_P46000 Cluster: Outer membrane usher protein fasD precu... 74 5e-12
UniRef50_UPI00005F8BE3 Cluster: COG3188: P pilus assembly protei... 74 6e-12
UniRef50_Q13FX3 Cluster: Putative fimbrial biogenesis outer memb... 74 6e-12
UniRef50_A7NQN2 Cluster: Binding-protein-dependent transport sys... 74 6e-12
UniRef50_Q89FI7 Cluster: Bll6713 protein; n=5; Alphaproteobacter... 73 8e-12
UniRef50_Q7N944 Cluster: Similar to outer membrane usher protein... 73 8e-12
UniRef50_Q67QF0 Cluster: Oligopeptide ABC transporter permease p... 73 8e-12
UniRef50_Q93IN8 Cluster: Salmonella atypical fimbria outer membr... 73 8e-12
UniRef50_Q7P899 Cluster: Dipeptide transport system permease pro... 73 8e-12
UniRef50_Q13L13 Cluster: Putative outer membrane fimbrial usher ... 73 8e-12
UniRef50_A6TPQ0 Cluster: Binding-protein-dependent transport sys... 73 8e-12
UniRef50_A3IAE9 Cluster: Nickel transport system; n=1; Bacillus ... 73 8e-12
UniRef50_P33129 Cluster: Outer membrane usher protein htrE precu... 73 8e-12
UniRef50_Q89KL0 Cluster: ABC transporter permease protein; n=5; ... 73 1e-11
UniRef50_Q28KP0 Cluster: Binding-protein-dependent transport sys... 73 1e-11
UniRef50_A6TPC4 Cluster: Binding-protein-dependent transport sys... 73 1e-11
UniRef50_A1UIJ0 Cluster: Binding-protein-dependent transport sys... 73 1e-11
UniRef50_A7D4N6 Cluster: Binding-protein-dependent transport sys... 73 1e-11
UniRef50_Q9I1Y5 Cluster: Usher CupA3; n=7; Pseudomonas aeruginos... 73 1e-11
UniRef50_Q8FWN8 Cluster: Peptide ABC transporter, permease prote... 73 1e-11
UniRef50_Q7WJY0 Cluster: ABC transport protein inner membrane co... 73 1e-11
UniRef50_P33408 Cluster: Outer membrane usher protein myfC precu... 73 1e-11
UniRef50_Q930N4 Cluster: ABC transporter, permease; n=1; Sinorhi... 72 2e-11
UniRef50_Q48MA4 Cluster: Outer membrane usher protein fimD; n=2;... 72 2e-11
UniRef50_A1SP55 Cluster: Binding-protein-dependent transport sys... 72 2e-11
UniRef50_P21647 Cluster: Outer membrane usher protein mrkC precu... 72 2e-11
UniRef50_Q8ELZ5 Cluster: Oligopeptide ABC transporter permease; ... 71 3e-11
UniRef50_Q1ARP2 Cluster: Binding-protein-dependent transport sys... 71 3e-11
UniRef50_A4TLG2 Cluster: Outer membrane usher protein precursor;... 71 3e-11
UniRef50_A0R7D2 Cluster: Dipeptide transport system permease pro... 71 4e-11
UniRef50_Q98AA8 Cluster: ABC transporter, permease; n=1; Mesorhi... 71 6e-11
UniRef50_Q5PFZ4 Cluster: Outer membrane fimbrial usher protein; ... 71 6e-11
UniRef50_Q11M95 Cluster: Binding-protein-dependent transport sys... 71 6e-11
UniRef50_A3Y4Z9 Cluster: Oligopeptide ABC transporter, permease ... 71 6e-11
UniRef50_Q8GFC9 Cluster: PhfD; n=3; Photorhabdus luminescens|Rep... 70 8e-11
UniRef50_Q2CJD0 Cluster: Putative dipeptide transport system per... 70 8e-11
UniRef50_Q2CEF5 Cluster: Peptide ABC transporter, permease prote... 70 8e-11
UniRef50_Q213C0 Cluster: Binding-protein-dependent transport sys... 70 8e-11
UniRef50_A4W4Z4 Cluster: Fimbrial biogenesis outer membrane ushe... 70 8e-11
UniRef50_A0JTR1 Cluster: Binding-protein-dependent transport sys... 70 8e-11
UniRef50_A5W6W9 Cluster: Fimbrial biogenesis outer membrane ushe... 70 1e-10
UniRef50_Q5WKK0 Cluster: Oligopeptide ABC transporter permease; ... 69 1e-10
UniRef50_Q0HI10 Cluster: Fimbrial biogenesis outer membrane ushe... 69 1e-10
UniRef50_Q9HWU4 Cluster: Usher CupB3; n=9; Proteobacteria|Rep: U... 69 2e-10
UniRef50_Q4KGP2 Cluster: Outer membrane usher protein; n=1; Pseu... 69 2e-10
UniRef50_Q8TRD3 Cluster: Oligopeptide ABC transporter, permease;... 69 2e-10
UniRef50_Q0VTH0 Cluster: Type 1 pili subunit FimD; n=1; Alcanivo... 69 2e-10
UniRef50_A6CZZ2 Cluster: Putative outer membrane protein; n=1; V... 69 2e-10
UniRef50_A3IB67 Cluster: Dipeptide transport system permease pro... 69 2e-10
UniRef50_Q9V2D1 Cluster: Binding protein-dependent transport sys... 69 2e-10
UniRef50_Q65LC9 Cluster: AppB; n=1; Bacillus licheniformis ATCC ... 68 3e-10
UniRef50_Q9ADY0 Cluster: DfpB; n=3; Agrobacterium tumefaciens|Re... 68 3e-10
UniRef50_Q0FSN8 Cluster: Peptide ABC transporter, permease prote... 68 3e-10
UniRef50_A1HFZ5 Cluster: Fimbrial biogenesis outer membrane ushe... 68 3e-10
UniRef50_Q53191 Cluster: Probable peptide ABC transporter permea... 68 3e-10
UniRef50_P45096 Cluster: Dipeptide transport system permease pro... 68 3e-10
UniRef50_Q8UAE0 Cluster: ABC transporter, membrane spanning prot... 68 4e-10
UniRef50_Q89VQ3 Cluster: Peptide ABC transporter permease protei... 68 4e-10
UniRef50_Q0K7J5 Cluster: ABC-type transporter, permease componen... 68 4e-10
UniRef50_A5TRK7 Cluster: Dipeptide ABC superfamily ATP binding c... 68 4e-10
UniRef50_A4IPU6 Cluster: ABC transporter; n=1; Geobacillus therm... 68 4e-10
UniRef50_A3TIW1 Cluster: ABC transporter permease protein; n=1; ... 68 4e-10
UniRef50_Q8YDG7 Cluster: Putative peptide transport system perme... 68 4e-10
UniRef50_Q1IKR6 Cluster: ABC peptide transporter, inner membrane... 67 5e-10
UniRef50_Q11FQ8 Cluster: Binding-protein-dependent transport sys... 67 5e-10
UniRef50_Q8TKE8 Cluster: Nickel ABC transporter, permease protei... 67 5e-10
UniRef50_UPI0000E87BBC Cluster: ABC transporter, inner membrane ... 67 7e-10
UniRef50_Q2S753 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 67 7e-10
UniRef50_Q8KJ79 Cluster: PUTATIVE ABC TRANSPORTER PERMEASE PROTE... 67 7e-10
UniRef50_Q11DM1 Cluster: Binding-protein-dependent transport sys... 67 7e-10
UniRef50_Q11BW7 Cluster: Binding-protein-dependent transport sys... 67 7e-10
UniRef50_A6TMB0 Cluster: Binding-protein-dependent transport sys... 67 7e-10
UniRef50_A6TCS1 Cluster: Outer membrane protein; export and asse... 67 7e-10
UniRef50_A4ECM8 Cluster: Putative uncharacterized protein; n=1; ... 67 7e-10
UniRef50_A1SXD6 Cluster: ABC transporter D-Ala-D-Ala-binding inn... 67 7e-10
UniRef50_A0QRE3 Cluster: Dipeptide transport system permease pro... 67 7e-10
UniRef50_A6UJI8 Cluster: Binding-protein-dependent transport sys... 66 1e-09
UniRef50_A6UEP6 Cluster: Binding-protein-dependent transport sys... 66 1e-09
UniRef50_A4W6W0 Cluster: Binding-protein-dependent transport sys... 66 1e-09
UniRef50_Q3IPR7 Cluster: ABC-type transport system permease prot... 66 1e-09
UniRef50_Q123K0 Cluster: Binding-protein-dependent transport sys... 66 1e-09
UniRef50_Q0K3A7 Cluster: ABC-type transporter, permease componen... 66 1e-09
UniRef50_A5ELU0 Cluster: Putative peptide ABC transporter protei... 66 1e-09
UniRef50_Q2FMZ9 Cluster: Binding-protein-dependent transport sys... 66 1e-09
UniRef50_O28506 Cluster: Dipeptide ABC transporter, permease pro... 66 1e-09
UniRef50_Q8UKN0 Cluster: ABC transporter, membrane spanning prot... 66 2e-09
UniRef50_Q9KFB7 Cluster: Nickel transport system; n=3; Bacillace... 65 2e-09
UniRef50_Q73N80 Cluster: Oligopeptide/dipeptide ABC transporter,... 65 2e-09
UniRef50_Q18V16 Cluster: Binding-protein-dependent transport sys... 65 2e-09
UniRef50_A6TND9 Cluster: Binding-protein-dependent transport sys... 65 2e-09
UniRef50_A3W7A7 Cluster: Hypothetical ABC transporter, permease ... 65 2e-09
UniRef50_Q18KK8 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 65 2e-09
UniRef50_P75750 Cluster: Uncharacterized outer membrane usher pr... 65 2e-09
UniRef50_Q6D2Y2 Cluster: ABC transporter permease protein; n=2; ... 65 3e-09
UniRef50_Q63P53 Cluster: Outer membrane usher protein; n=15; Bur... 65 3e-09
UniRef50_Q5WLH9 Cluster: Dipeptide/oligopeptide/nickel ABC trans... 65 3e-09
UniRef50_Q11FN3 Cluster: Binding-protein-dependent transport sys... 65 3e-09
UniRef50_A4W5W1 Cluster: Fimbrial biogenesis outer membrane ushe... 65 3e-09
UniRef50_Q8TLI7 Cluster: Oligopeptide ABC transporter, permease ... 65 3e-09
UniRef50_A3ZVY1 Cluster: Oligopeptide ABC transporter permease p... 64 4e-09
UniRef50_P53517 Cluster: Outer membrane usher protein afaC precu... 64 4e-09
UniRef50_Q3ZZ44 Cluster: Peptide ABC transporter, permease prote... 64 5e-09
UniRef50_Q3IF63 Cluster: Peptide transport protein; n=3; Alterom... 64 5e-09
UniRef50_A6TTE0 Cluster: Binding-protein-dependent transport sys... 64 5e-09
UniRef50_A3K511 Cluster: Nickel ABC transporter, permease protei... 64 5e-09
UniRef50_P33591 Cluster: Nickel transport system permease protei... 64 7e-09
UniRef50_Q7WEA7 Cluster: Inner membrane component of binding-pro... 63 9e-09
UniRef50_Q12FS6 Cluster: Binding-protein-dependent transport sys... 63 9e-09
UniRef50_Q12DJ8 Cluster: Binding-protein-dependent transport sys... 63 9e-09
UniRef50_A6TPV5 Cluster: Binding-protein-dependent transport sys... 63 9e-09
UniRef50_P76655 Cluster: Uncharacterized outer membrane usher pr... 63 9e-09
UniRef50_Q9KBX7 Cluster: Nickel ABC transporter; n=2; Bacillus|R... 63 1e-08
UniRef50_Q989T3 Cluster: ABC transporter, permease protein; n=2;... 63 1e-08
UniRef50_Q81UG5 Cluster: Oligopeptide ABC transporter, permease ... 63 1e-08
UniRef50_A1WRD7 Cluster: Binding-protein-dependent transport sys... 63 1e-08
UniRef50_A6UUC5 Cluster: Binding-protein-dependent transport sys... 63 1e-08
UniRef50_Q9KFX2 Cluster: Oligopeptide ABC transporter; n=4; Firm... 62 2e-08
UniRef50_Q981Q7 Cluster: ABC transporter, permease protein; n=12... 62 2e-08
UniRef50_Q6YR28 Cluster: ABC-type dipeptide/oligopeptide transpo... 62 2e-08
UniRef50_Q39GP9 Cluster: Fimbrial biogenesis outer membrane ushe... 62 2e-08
UniRef50_Q1GCZ0 Cluster: Binding-protein-dependent transport sys... 62 2e-08
UniRef50_A7BDU5 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A6Q8P1 Cluster: Dipeptide ABC transporter, permease; n=... 62 2e-08
UniRef50_A3JXK8 Cluster: ABC transporter permease protein; n=1; ... 62 2e-08
UniRef50_A1W4F8 Cluster: Binding-protein-dependent transport sys... 62 2e-08
UniRef50_A0KFM8 Cluster: Outer membrane usher protein; n=3; Gamm... 62 2e-08
UniRef50_Q98BT0 Cluster: ABC transporter, permease protein; n=5;... 62 2e-08
UniRef50_Q663X9 Cluster: Outer membrane fimbrial usher porin pre... 62 2e-08
UniRef50_Q5QUD4 Cluster: ABC-type dipeptide transport systems, p... 62 2e-08
UniRef50_Q1LMX8 Cluster: Binding-protein-dependent transport sys... 62 2e-08
UniRef50_Q0S9Q7 Cluster: ABC dipeptide transporter, permease com... 62 2e-08
UniRef50_A5ZYP1 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_A5WXU5 Cluster: LecB; n=6; Proteobacteria|Rep: LecB - A... 62 2e-08
UniRef50_A1AYK8 Cluster: Binding-protein-dependent transport sys... 62 2e-08
UniRef50_Q8Z0F6 Cluster: Permease protein of oligopeptide ABC tr... 62 3e-08
UniRef50_Q5FP38 Cluster: Dipeptide ABC transport system permease... 62 3e-08
UniRef50_Q18QN7 Cluster: Binding-protein-dependent transport sys... 62 3e-08
UniRef50_Q0SBH3 Cluster: ABC peptide transporter, permease compo... 62 3e-08
UniRef50_A3ZV28 Cluster: Peptide ABC transporter, permease prote... 62 3e-08
UniRef50_Q8PU83 Cluster: Dipeptide/oligopeptide transporter, per... 62 3e-08
UniRef50_Q5V091 Cluster: Dipeptide ABC transporter permease; n=5... 62 3e-08
UniRef50_Q67T79 Cluster: Oligopeptide ABC transporter permease p... 61 4e-08
UniRef50_Q67KR8 Cluster: Oligopeptide ABC transporter permease p... 61 4e-08
UniRef50_Q2CC32 Cluster: ABC transporter permease protein; n=1; ... 61 4e-08
UniRef50_Q28TH0 Cluster: Binding-protein-dependent transport sys... 61 4e-08
UniRef50_Q1FG01 Cluster: Binding-protein-dependent transport sys... 61 4e-08
UniRef50_A7NQN7 Cluster: Binding-protein-dependent transport sys... 61 4e-08
UniRef50_A5EEY0 Cluster: Putative ABC transporter, permease prot... 61 4e-08
UniRef50_O58538 Cluster: 323aa long hypothetical oligopeptide tr... 61 4e-08
UniRef50_Q9RVR3 Cluster: Peptide ABC transporter, permease prote... 61 5e-08
UniRef50_Q97GJ1 Cluster: Oligopeptide ABC-type transporter, perm... 61 5e-08
UniRef50_Q47XM7 Cluster: Peptide ABC transporter, permease prote... 61 5e-08
UniRef50_A5W749 Cluster: Fimbrial biogenesis outer membrane ushe... 61 5e-08
UniRef50_Q2FH55 Cluster: Putative oligopeptide transport system ... 61 5e-08
UniRef50_Q89RA5 Cluster: ABC transporter permease protein; n=2; ... 60 6e-08
UniRef50_Q87LX8 Cluster: Peptide ABC transporter, permease prote... 60 6e-08
UniRef50_Q8U120 Cluster: Dipeptide transport system permease pro... 60 6e-08
UniRef50_Q9LCD2 Cluster: Dipeptide transporter DppB homolog; n=1... 60 8e-08
UniRef50_A3XDX8 Cluster: ABC-transport protein, inner membrane c... 60 8e-08
UniRef50_A3I5Z0 Cluster: Oligopeptide ABC transporter, permease ... 60 8e-08
UniRef50_A1S0Q2 Cluster: Binding-protein-dependent transport sys... 60 8e-08
UniRef50_Q895A2 Cluster: Putative permease, nickel or dipeptide ... 60 1e-07
UniRef50_Q7VVH4 Cluster: ABC-transport protein, inner membrane c... 60 1e-07
UniRef50_Q5LPL4 Cluster: Dipeptide ABC trasnporter, permease pro... 60 1e-07
UniRef50_Q28NH1 Cluster: Binding-protein-dependent transport sys... 60 1e-07
UniRef50_A6NRE3 Cluster: Putative uncharacterized protein; n=1; ... 60 1e-07
UniRef50_Q13J75 Cluster: ABC nickel transporter, inner membrane ... 59 1e-07
UniRef50_A5N711 Cluster: OppB; n=1; Clostridium kluyveri DSM 555... 59 1e-07
UniRef50_A5FXR6 Cluster: Binding-protein-dependent transport sys... 59 1e-07
UniRef50_A5FQK1 Cluster: Nickel-transporting ATPase; n=2; Dehalo... 59 1e-07
UniRef50_Q18K39 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 59 1e-07
UniRef50_Q8D4K2 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 59 2e-07
UniRef50_Q7VP25 Cluster: Probable fimbrial outer membrane usher ... 59 2e-07
UniRef50_Q6D8N0 Cluster: Putative outer membrane usher protein; ... 59 2e-07
UniRef50_Q6CYT3 Cluster: ABC transporter permease protein; n=38;... 59 2e-07
UniRef50_Q30Y57 Cluster: Oligopeptide ABC transporter, permease ... 59 2e-07
UniRef50_Q2JN44 Cluster: OppBC ABC transporter family, permease ... 59 2e-07
UniRef50_Q12HG6 Cluster: Binding-protein-dependent transport sys... 59 2e-07
UniRef50_Q11GY1 Cluster: Binding-protein-dependent transport sys... 59 2e-07
UniRef50_Q11C72 Cluster: Binding-protein-dependent transport sys... 59 2e-07
UniRef50_A5EHZ8 Cluster: Putative nickel transport protein; n=2;... 59 2e-07
UniRef50_A4AGM1 Cluster: ABC transporter permease; n=2; Actinoba... 59 2e-07
UniRef50_Q894Y0 Cluster: Transport system permease, nickel or di... 58 3e-07
UniRef50_A6NZV2 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_A6CW01 Cluster: Putative permease component of ABC tran... 58 3e-07
UniRef50_A0KYK9 Cluster: Binding-protein-dependent transport sys... 58 3e-07
UniRef50_P37868 Cluster: Outer membrane usher protein pefC precu... 58 3e-07
UniRef50_Q89PZ2 Cluster: ABC transporter permease protein; n=10;... 58 3e-07
UniRef50_Q89C77 Cluster: ABC transporter permease protein; n=22;... 58 3e-07
UniRef50_Q2L055 Cluster: Outer membrane fimbrial usher protein p... 58 3e-07
UniRef50_Q13PH8 Cluster: ABC peptide transporter, inner membrane... 58 3e-07
UniRef50_Q0LEX9 Cluster: Binding-protein-dependent transport sys... 58 3e-07
UniRef50_A1HNQ4 Cluster: Binding-protein-dependent transport sys... 58 3e-07
UniRef50_A0HC42 Cluster: Fimbrial biogenesis outer membrane ushe... 58 3e-07
UniRef50_Q8DPF3 Cluster: ABC transporter membrane-spanning perme... 58 4e-07
UniRef50_Q89XK2 Cluster: Peptide ABC transporter permease protei... 58 4e-07
UniRef50_Q73QP9 Cluster: Oligopeptide/dipeptide ABC transporter,... 58 4e-07
UniRef50_A3PFV5 Cluster: Binding-protein-dependent transport sys... 58 4e-07
UniRef50_A3K7U3 Cluster: ABC transporter, permease protein; n=1;... 58 4e-07
UniRef50_P42062 Cluster: Oligopeptide transport system permease ... 58 4e-07
UniRef50_Q8D8T6 Cluster: ABC-type antimicrobial peptide transpor... 57 6e-07
UniRef50_Q578R3 Cluster: Peptide ABC transporter, permease prote... 57 6e-07
UniRef50_Q2RST2 Cluster: Binding-protein-dependent transport sys... 57 6e-07
UniRef50_Q1GL97 Cluster: Binding-protein-dependent transport sys... 57 6e-07
UniRef50_Q168X0 Cluster: Oligopeptide ABC transporter, permease ... 57 6e-07
UniRef50_A4TZV6 Cluster: Oligopeptide transport system permease ... 57 6e-07
UniRef50_A0JRY0 Cluster: Binding-protein-dependent transport sys... 57 6e-07
UniRef50_Q4J814 Cluster: Binding-protein-dependent transporter; ... 57 6e-07
UniRef50_P0A4N7 Cluster: Oligopeptide transport system permease ... 57 6e-07
UniRef50_Q98IS2 Cluster: Permease protein of oligopeptide ABC tr... 57 8e-07
UniRef50_Q6AP16 Cluster: Probable oligopeptide ABC transporter, ... 57 8e-07
UniRef50_Q6ANY9 Cluster: Related to peptide ABC transporter, per... 57 8e-07
UniRef50_Q67T60 Cluster: Oligopeptide ABC transporter permease p... 57 8e-07
UniRef50_Q5LQD7 Cluster: Peptide/opine/nickel uptake family ABC ... 57 8e-07
UniRef50_Q3DVI5 Cluster: Binding-protein-dependent transport sys... 57 8e-07
UniRef50_A6X471 Cluster: Binding-protein-dependent transport sys... 57 8e-07
UniRef50_A3IE85 Cluster: Permease protein of oligopeptide ABC tr... 57 8e-07
UniRef50_A1WGF9 Cluster: Binding-protein-dependent transport sys... 57 8e-07
UniRef50_A0B7Z6 Cluster: Binding-protein-dependent transport sys... 57 8e-07
UniRef50_Q9X0S5 Cluster: Oligopeptide ABC transporter, permease ... 56 1e-06
UniRef50_Q930F4 Cluster: Putative ABC transporter, permease; n=1... 56 1e-06
UniRef50_Q7VJ34 Cluster: Nickel transport system permease protei... 56 1e-06
UniRef50_Q5LVN9 Cluster: Peptide ABC transporter, permease prote... 56 1e-06
UniRef50_Q9R6D7 Cluster: Tiorf123 protein; n=4; Agrobacterium tu... 56 1e-06
UniRef50_Q2CJ72 Cluster: ABC transporter membrane-spanning perme... 56 1e-06
UniRef50_Q1R133 Cluster: Binding-protein-dependent transport sys... 56 1e-06
UniRef50_A6X7U7 Cluster: Binding-protein-dependent transport sys... 56 1e-06
UniRef50_A5UQE2 Cluster: Binding-protein-dependent transport sys... 56 1e-06
UniRef50_A4FJ63 Cluster: ABC transporter, permease protein; n=2;... 56 1e-06
UniRef50_Q9HLG0 Cluster: ABC-transporter (Orf B) related protein... 56 1e-06
UniRef50_P53514 Cluster: Outer membrane usher protein pmfC precu... 56 1e-06
UniRef50_P12050 Cluster: Outer membrane usher protein fanD precu... 56 1e-06
UniRef50_Q97ML9 Cluster: Oligopeptide transport permease protein... 56 1e-06
UniRef50_Q6A636 Cluster: Dipeptide transport system permease pro... 56 1e-06
UniRef50_Q67QM1 Cluster: Oligopeptide ABC transporter permease p... 56 1e-06
UniRef50_Q4ACI9 Cluster: Fimbrial usher protein; n=1; Edwardsiel... 56 1e-06
UniRef50_Q2CJ58 Cluster: Putative oligopeptide ABC transport sys... 56 1e-06
UniRef50_Q14T95 Cluster: ABC-transport protein, inner membrane c... 56 1e-06
UniRef50_A7BKM5 Cluster: Peptide ABC transporter, permease prote... 56 1e-06
UniRef50_A6SUK8 Cluster: ABC-type transport systems, permease co... 56 1e-06
UniRef50_A3VG50 Cluster: Dipeptide transport system permease pro... 56 1e-06
UniRef50_A3SZ64 Cluster: ABC-transport protein, inner membrane c... 56 1e-06
UniRef50_A3P1J6 Cluster: Fimbrial usher family protein; n=3; Bur... 56 1e-06
UniRef50_A0NTH9 Cluster: Hypothetical ABC transporter permease p... 56 1e-06
UniRef50_A0NPC2 Cluster: Oligopeptide transporter, permease prot... 56 1e-06
UniRef50_P0A2J3 Cluster: Peptide transport system permease prote... 56 1e-06
UniRef50_Q3D3X3 Cluster: Peptide ABC transporter, permease prote... 56 2e-06
UniRef50_Q11L61 Cluster: Binding-protein-dependent transport sys... 56 2e-06
UniRef50_A3I515 Cluster: Oligopeptide ABC transporter permease p... 56 2e-06
UniRef50_A3CL90 Cluster: Nickel ABC transporter, putative; n=1; ... 56 2e-06
UniRef50_P15484 Cluster: Outer membrane usher protein CS3-2; n=5... 56 2e-06
UniRef50_Q9ZI30 Cluster: Putative OppB; n=1; Treponema denticola... 55 2e-06
UniRef50_Q9KB56 Cluster: Oligopeptide ABC transporter; n=16; Bac... 55 2e-06
UniRef50_Q981W2 Cluster: Dipeptide transport system permease pro... 55 2e-06
UniRef50_Q8KBZ9 Cluster: Peptide ABC transporter, permease prote... 55 2e-06
UniRef50_Q2J9B6 Cluster: Binding-protein-dependent transport sys... 55 2e-06
UniRef50_Q13K09 Cluster: ABC peptide transporter, inner membrane... 55 2e-06
UniRef50_A6WCC2 Cluster: Binding-protein-dependent transport sys... 55 2e-06
UniRef50_A1TXT2 Cluster: Binding-protein-dependent transport sys... 55 2e-06
UniRef50_Q9V056 Cluster: AppB-2 oligopeptide transport system pe... 55 2e-06
UniRef50_Q8UG44 Cluster: ABC transporter, membrane spanning prot... 55 3e-06
UniRef50_Q67SQ9 Cluster: Oligopeptide ABC transporter permease p... 55 3e-06
UniRef50_Q7UAV2 Cluster: Probable fimbrial protein remnant; n=2;... 55 3e-06
UniRef50_A4M636 Cluster: Binding-protein-dependent transport sys... 55 3e-06
UniRef50_A4FBS5 Cluster: Putative peptide transport system perme... 55 3e-06
UniRef50_Q8RDY3 Cluster: Dipeptide transport system permease pro... 54 4e-06
UniRef50_Q20HW1 Cluster: OphB; n=21; Alphaproteobacteria|Rep: Op... 54 4e-06
UniRef50_A5I1J0 Cluster: ABC transporter, permease protein; n=4;... 54 4e-06
UniRef50_A4M8W3 Cluster: Binding-protein-dependent transport sys... 54 4e-06
UniRef50_A3Y6P7 Cluster: ABC transporter, permease protein; n=1;... 54 4e-06
UniRef50_Q15RH3 Cluster: Binding-protein-dependent transport sys... 54 5e-06
UniRef50_A5US99 Cluster: Binding-protein-dependent transport sys... 54 5e-06
UniRef50_A1SJC1 Cluster: Binding-protein-dependent transport sys... 54 5e-06
UniRef50_A0JYI2 Cluster: Binding-protein-dependent transport sys... 54 5e-06
UniRef50_Q8U3U7 Cluster: ABC transporter; n=11; cellular organis... 54 5e-06
UniRef50_Q8RD25 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 54 7e-06
UniRef50_Q2FPT2 Cluster: Binding-protein-dependent transport sys... 54 7e-06
UniRef50_P33388 Cluster: Outer membrane usher protein sefC precu... 54 7e-06
UniRef50_Q9WXN7 Cluster: Oligopeptide ABC transporter, permease ... 53 1e-05
UniRef50_Q97D49 Cluster: Oligopeptide ABC transporter, permease ... 53 1e-05
UniRef50_Q8YVG6 Cluster: Permease protein of ABC transporter; n=... 53 1e-05
UniRef50_Q7AP39 Cluster: Lin0183 protein; n=18; Firmicutes|Rep: ... 53 1e-05
UniRef50_Q4J2J5 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_Q2C8W5 Cluster: Putative outer membrane protein; n=1; P... 53 1e-05
UniRef50_Q28QP1 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_Q11BX9 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_A4AFN4 Cluster: Putative ABC transporter, permease; n=1... 53 1e-05
UniRef50_A1TUA5 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_A0KDN1 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_Q8THB7 Cluster: Oligopeptide ABC transporter, permease ... 53 1e-05
UniRef50_A0B7H3 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_P33410 Cluster: Outer membrane usher protein fimC precu... 53 1e-05
UniRef50_UPI0000E0E13C Cluster: peptide transport protein (ABC s... 53 1e-05
UniRef50_O86691 Cluster: Putative transport system permease prot... 53 1e-05
UniRef50_Q0RGA9 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 53 1e-05
UniRef50_A6M0G0 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_A1R653 Cluster: Putative ABC-type dipeptide/oligopeptid... 53 1e-05
UniRef50_A0LI52 Cluster: Binding-protein-dependent transport sys... 53 1e-05
UniRef50_A0KJF5 Cluster: Peptide ABC transporter, permease prote... 53 1e-05
UniRef50_A0RX64 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 53 1e-05
UniRef50_P77308 Cluster: Inner membrane ABC transporter permease... 53 1e-05
UniRef50_Q8NN85 Cluster: ABC-type transporter, permease componen... 52 2e-05
UniRef50_Q5SHU7 Cluster: Peptide ABC transporter permease protei... 52 2e-05
UniRef50_O31307 Cluster: Oligopeptide permease homolog B; n=3; B... 52 2e-05
UniRef50_Q3W1B3 Cluster: Binding-protein-dependent transport sys... 52 2e-05
UniRef50_A5CP40 Cluster: Putative peptide ABC transporter, perme... 52 2e-05
UniRef50_A1WPK3 Cluster: Binding-protein-dependent transport sys... 52 2e-05
UniRef50_A1UE34 Cluster: Binding-protein-dependent transport sys... 52 2e-05
UniRef50_Q9WZ02 Cluster: Oligopeptide ABC transporter, permease ... 52 2e-05
UniRef50_Q7M9E5 Cluster: OLIGOPEPTIDE ABC TRANSPORTER PERMEASE; ... 52 2e-05
UniRef50_Q74D85 Cluster: Peptide ABC transporter, permease prote... 52 2e-05
UniRef50_Q7P431 Cluster: Nickel transport system permease protei... 52 2e-05
UniRef50_Q3W1D2 Cluster: Binding-protein-dependent transport sys... 52 2e-05
UniRef50_Q1GMM9 Cluster: Binding-protein-dependent transport sys... 52 2e-05
UniRef50_Q8PVV2 Cluster: Dipeptide/oligopeptide ABC transporter,... 52 2e-05
UniRef50_P07110 Cluster: Outer membrane usher protein papC precu... 52 2e-05
UniRef50_Q87TM0 Cluster: Peptide ABC transporter, permease prote... 52 3e-05
UniRef50_A5GAK3 Cluster: Binding-protein-dependent transport sys... 52 3e-05
UniRef50_A4AFM8 Cluster: Dipeptide ABC transporter, permease pro... 52 3e-05
UniRef50_A2TW67 Cluster: Dipeptide ABC transporter; n=7; Bactero... 52 3e-05
UniRef50_A0NZ98 Cluster: D-ala-D-ala transporter subunit; n=1; S... 52 3e-05
UniRef50_Q97VF8 Cluster: ABC transporter, permease protein; n=2;... 52 3e-05
UniRef50_Q0W8F2 Cluster: Putative ABC-type peptide transport sys... 52 3e-05
UniRef50_Q2JZ56 Cluster: Dipeptide ABC transporter, permease pro... 51 4e-05
UniRef50_Q0RCM0 Cluster: Dipeptide transport protein; n=1; Frank... 51 4e-05
UniRef50_Q0BF37 Cluster: Fimbrial biogenesis outer membrane ushe... 51 4e-05
UniRef50_A0ACN4 Cluster: Putative ABC transporter permease prote... 51 4e-05
UniRef50_Q8REI9 Cluster: Dipeptide transport system permease pro... 51 5e-05
UniRef50_Q8CJQ7 Cluster: Putative peptide transport system perme... 51 5e-05
UniRef50_Q88XE6 Cluster: Oligopeptide ABC transporter, permease ... 51 5e-05
UniRef50_Q7WNN1 Cluster: Inner membrane component of ABC transpo... 51 5e-05
UniRef50_Q7M9E2 Cluster: NICKEL TRANSPORT SYSTEM PERMEASE; n=2; ... 51 5e-05
UniRef50_Q6DB27 Cluster: ABC transporter permease protein; n=13;... 51 5e-05
UniRef50_Q0RLY9 Cluster: Dipeptide transport protein 1; n=1; Fra... 51 5e-05
UniRef50_A7IAY1 Cluster: Binding-protein-dependent transport sys... 51 5e-05
UniRef50_Q7M968 Cluster: PUTATIVE ABC TRANSPORTER, PERMEASE PROT... 50 7e-05
UniRef50_Q6MQU8 Cluster: Peptide ABC transporter, permease prote... 50 7e-05
UniRef50_Q2FZQ9 Cluster: Oligopeptide ABC transporter, permease ... 50 7e-05
UniRef50_Q0SEK6 Cluster: ABC peptide transporter, permease compo... 50 7e-05
UniRef50_Q0BVY0 Cluster: Transporter; n=4; Alphaproteobacteria|R... 50 7e-05
UniRef50_Q0A9Q0 Cluster: Binding-protein-dependent transport sys... 50 7e-05
UniRef50_A4FN69 Cluster: ABC peptide transporter, membrane subun... 50 7e-05
UniRef50_A4F8E9 Cluster: Oligopeptide/dipeptide ABC transporter,... 50 7e-05
UniRef50_A3EQ60 Cluster: Putative oligopeptide ABC transporter; ... 50 7e-05
UniRef50_Q9HIL1 Cluster: Dipeptide transport system, permease pr... 50 7e-05
UniRef50_Q6W271 Cluster: Transporter; n=3; Rhizobium|Rep: Transp... 50 9e-05
UniRef50_Q2CGU3 Cluster: Oligopeptide ABC transporter, permease ... 50 9e-05
UniRef50_Q0RX95 Cluster: ABC peptide transporter, permease compo... 50 9e-05
UniRef50_Q0LD67 Cluster: Binding-protein-dependent transport sys... 50 9e-05
UniRef50_A5EL13 Cluster: Putative ABC transporter; n=1; Bradyrhi... 50 9e-05
UniRef50_A4SP46 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 50 9e-05
UniRef50_A3HQY9 Cluster: Binding-protein-dependent transport sys... 50 9e-05
UniRef50_P26949 Cluster: F1 capsule-anchoring protein precursor;... 50 9e-05
UniRef50_Q8YDF6 Cluster: OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE ... 50 1e-04
UniRef50_Q73Q05 Cluster: Oligopeptide/dipeptide ABC transporter,... 50 1e-04
UniRef50_Q3E221 Cluster: Binding-protein-dependent transport sys... 50 1e-04
UniRef50_A4TRV6 Cluster: Outer membrane fimbrial usher protein p... 50 1e-04
UniRef50_A2SM58 Cluster: IM pore protein; n=4; Proteobacteria|Re... 50 1e-04
UniRef50_Q9ZAS5 Cluster: Transmembrane transport protein DppB; n... 49 2e-04
UniRef50_Q9X269 Cluster: Oligopeptide ABC transporter, permease ... 49 2e-04
UniRef50_Q9WYD7 Cluster: Oligopeptide ABC transporter, permease ... 49 2e-04
UniRef50_Q9WXS7 Cluster: Oligopeptide ABC transporter, permease ... 49 2e-04
UniRef50_Q893C6 Cluster: Dipeptide transport system permease pro... 49 2e-04
UniRef50_Q7NDV7 Cluster: Oligopeptide ABC transporter permease p... 49 2e-04
UniRef50_Q73JE5 Cluster: Peptide ABC transporter, permease prote... 49 2e-04
UniRef50_Q3A9M3 Cluster: Oligopeptide ABC transporter, permease ... 49 2e-04
UniRef50_Q3W478 Cluster: Binding-protein-dependent transport sys... 49 2e-04
UniRef50_Q3E296 Cluster: Binding-protein-dependent transport sys... 49 2e-04
UniRef50_Q0A6L6 Cluster: Binding-protein-dependent transport sys... 49 2e-04
UniRef50_A6DMP6 Cluster: Putative transmembrane ABC transporter ... 49 2e-04
UniRef50_A5KJC9 Cluster: Putative uncharacterized protein; n=1; ... 49 2e-04
UniRef50_A4ALH0 Cluster: ABC transporter, permease protein; n=1;... 49 2e-04
UniRef50_A4AG90 Cluster: Peptide ABC transporter, permease prote... 49 2e-04
UniRef50_Q8TN09 Cluster: Peptide ABC transporter, permease prote... 49 2e-04
UniRef50_Q97D42 Cluster: Oligopeptide ABC transporter, permease ... 49 2e-04
UniRef50_Q8RDH6 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 49 2e-04
UniRef50_O86573 Cluster: Oligopeptide transport system integral ... 49 2e-04
UniRef50_Q6M2I9 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 49 2e-04
UniRef50_Q28M48 Cluster: Binding-protein-dependent transport sys... 49 2e-04
UniRef50_A6QDI4 Cluster: Oligopeptide ABC transporter, permease ... 49 2e-04
UniRef50_Q5LPN3 Cluster: Peptide/nickel/opine uptake family ABC ... 48 3e-04
UniRef50_Q48E35 Cluster: Peptide ABC transporter, permease prote... 48 3e-04
UniRef50_A7CZH3 Cluster: Binding-protein-dependent transport sys... 48 3e-04
UniRef50_A6AMM5 Cluster: Putative outer membrane usher protein P... 48 3e-04
UniRef50_A4ALV3 Cluster: ABC transporter, membrane spanning prot... 48 3e-04
UniRef50_Q6KZ19 Cluster: Oligopeptide ABC transporter Opp2, perm... 48 3e-04
UniRef50_P24138 Cluster: Oligopeptide transport system permease ... 48 3e-04
UniRef50_Q89U18 Cluster: ABC transporter permease protein; n=1; ... 48 4e-04
UniRef50_Q82BT4 Cluster: Putative peptide ABC transporter permea... 48 4e-04
UniRef50_Q6NEY2 Cluster: Putative binding-protein-dependent inte... 48 4e-04
UniRef50_Q312L7 Cluster: Dipeptide ABC transporter, permease pro... 48 4e-04
UniRef50_Q8RTF5 Cluster: OppB; n=15; Lactobacillales|Rep: OppB -... 48 4e-04
UniRef50_Q021F8 Cluster: Binding-protein-dependent transport sys... 48 4e-04
UniRef50_A6NWH3 Cluster: Putative uncharacterized protein; n=1; ... 48 4e-04
UniRef50_A0QZP4 Cluster: ABC transporter permease protein; n=1; ... 48 4e-04
UniRef50_Q9HLG5 Cluster: Dipeptide transport system permease pro... 48 4e-04
UniRef50_Q9KKK5 Cluster: ABC transporter, permease protein; n=17... 48 5e-04
UniRef50_Q7CNS8 Cluster: OLIGOPEPTIDE TRANSPORT SYSTEM PERMEASE ... 48 5e-04
UniRef50_Q6MF23 Cluster: Putative dipeptide transport system per... 48 5e-04
UniRef50_Q0RID9 Cluster: ABC transporter permease; n=2; Frankia ... 48 5e-04
UniRef50_Q0LE73 Cluster: Binding-protein-dependent transport sys... 48 5e-04
UniRef50_Q037H3 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 48 5e-04
UniRef50_A7B6V9 Cluster: Putative uncharacterized protein; n=1; ... 48 5e-04
UniRef50_A6WA16 Cluster: Binding-protein-dependent transport sys... 48 5e-04
UniRef50_A6DGV5 Cluster: ABC-type dipeptide/oligopeptide/nickel ... 48 5e-04
UniRef50_A6D0K1 Cluster: Predicted outer membrane protein; n=1; ... 48 5e-04
UniRef50_A5L6F3 Cluster: Probable ABC transporter, permease prot... 48 5e-04
UniRef50_A1T284 Cluster: Binding-protein-dependent transport sys... 48 5e-04
UniRef50_A1RZL4 Cluster: Binding-protein-dependent transport sys... 48 5e-04
UniRef50_Q6ML30 Cluster: Dipeptide transport system permease pro... 47 6e-04
UniRef50_Q2JXU3 Cluster: Peptide/opine/nickel ABC transporter (P... 47 6e-04
UniRef50_A1WMS2 Cluster: Binding-protein-dependent transport sys... 47 6e-04
UniRef50_A1G7W9 Cluster: Binding-protein-dependent transport sys... 47 6e-04
UniRef50_UPI00015C5DB2 Cluster: hypothetical protein CKO_03405; ... 47 8e-04
UniRef50_UPI00004DBA72 Cluster: UPI00004DBA72 related cluster; n... 47 8e-04
UniRef50_Q81TS3 Cluster: Oligopeptide ABC transporter, permease ... 47 8e-04
UniRef50_Q6A891 Cluster: ABC transporter permease protein; n=1; ... 47 8e-04
UniRef50_Q49WC0 Cluster: ABC-type dipeptide oligopeptide nickel ... 47 8e-04
UniRef50_Q3WA91 Cluster: Binding-protein-dependent transport sys... 47 8e-04
UniRef50_A3PR72 Cluster: Binding-protein-dependent transport sys... 47 8e-04
UniRef50_A0QW78 Cluster: ABC transporter permease protein; n=4; ... 47 8e-04
UniRef50_A0JYT0 Cluster: Binding-protein-dependent transport sys... 47 8e-04
UniRef50_Q978R0 Cluster: ABC transport system permease protein P... 47 8e-04
UniRef50_UPI00015C4AE2 Cluster: dipeptidase; n=1; Campylobacter ... 46 0.001
UniRef50_UPI000050F855 Cluster: COG0601: ABC-type dipeptide/olig... 46 0.001
UniRef50_Q4J5D2 Cluster: Binding-protein-dependent transport sys... 46 0.001
>UniRef50_P75857 Cluster: Uncharacterized outer membrane usher
protein ycbS precursor; n=26; Enterobacteriaceae|Rep:
Uncharacterized outer membrane usher protein ycbS
precursor - Escherichia coli (strain K12)
Length = 866
Score = 144 bits (349), Expect = 3e-33
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS
Sbjct: 291 IAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 350
Query: 222 SVPLLQRQGRI 254
SVPLLQRQGRI
Sbjct: 351 SVPLLQRQGRI 361
Score = 85.8 bits (203), Expect = 1e-15
Identities = 37/41 (90%), Positives = 38/41 (92%)
Frame = +2
Query: 245 GANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWSG 367
G +YAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTW G
Sbjct: 359 GRIKYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWYG 399
>UniRef50_Q8ZQM2 Cluster: Glutathione transport system permease
protein gsiC; n=68; Bacteria|Rep: Glutathione transport
system permease protein gsiC - Salmonella typhimurium
Length = 306
Score = 108 bits (259), Expect = 2e-22
Identities = 51/55 (92%), Positives = 53/55 (96%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NAMIPVVT GLQFGFLLGGSIVVEKVFNWPGLGRLLVDSV+MRDYPVIQAE+LL
Sbjct: 226 NAMIPVVTMMGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVDMRDYPVIQAEVLL 280
Score = 54.8 bits (126), Expect = 3e-06
Identities = 26/26 (100%), Positives = 26/26 (100%)
Frame = -2
Query: 507 FSLEFILINLVVDVLYAAINPAIRYK 430
FSLEFILINLVVDVLYAAINPAIRYK
Sbjct: 281 FSLEFILINLVVDVLYAAINPAIRYK 306
>UniRef50_P72211 Cluster: Outer membrane usher protein; n=1; Proteus
mirabilis|Rep: Outer membrane usher protein - Proteus
mirabilis
Length = 843
Score = 105 bits (253), Expect = 1e-21
Identities = 47/70 (67%), Positives = 60/70 (85%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AK NA++ I+QNGY IYQT+VSPGAFEI DLY TS+SGDL V I+E DGS +SY VP+S
Sbjct: 280 IAKGNAKVVIRQNGYVIYQTFVSPGAFEIRDLYPTSNSGDLYVTIEENDGSKHSYVVPYS 339
Query: 222 SVPLLQRQGR 251
+VP+LQR+G+
Sbjct: 340 AVPILQREGQ 349
>UniRef50_UPI00005F7ED2 Cluster: COG3188: P pilus assembly protein,
porin PapC; n=1; Yersinia mollaretii ATCC 43969|Rep:
COG3188: P pilus assembly protein, porin PapC - Yersinia
mollaretii ATCC 43969
Length = 850
Score = 102 bits (245), Expect = 1e-20
Identities = 44/71 (61%), Positives = 60/71 (84%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNAQ+TI+QNGY IY+T+V GAF I DL+ T SSG+L V + EADGS+NSY+VP++
Sbjct: 274 IARSNAQVTIRQNGYVIYETFVPSGAFVIDDLFPTGSSGNLQVSVTEADGSINSYTVPYA 333
Query: 222 SVPLLQRQGRI 254
+VP LQR+GR+
Sbjct: 334 TVPKLQREGRM 344
>UniRef50_P43662 Cluster: Outer membrane usher protein lpfC
precursor; n=8; Enterobacteriaceae|Rep: Outer membrane
usher protein lpfC precursor - Salmonella typhimurium
Length = 842
Score = 101 bits (242), Expect = 3e-20
Identities = 45/71 (63%), Positives = 58/71 (81%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNA++T++QN Y IY+T+V PGAFEI+DLY TS+SGDL V IKE+DGS + PFS
Sbjct: 298 IAKSNAEVTVEQNNYVIYRTFVQPGAFEINDLYPTSNSGDLTVTIKESDGSEQKFVQPFS 357
Query: 222 SVPLLQRQGRI 254
SV LLQR+G +
Sbjct: 358 SVALLQREGHL 368
>UniRef50_Q1R5K1 Cluster: Outer membrane usher protein AufC; n=5;
Escherichia coli|Rep: Outer membrane usher protein AufC
- Escherichia coli (strain UTI89 / UPEC)
Length = 864
Score = 101 bits (241), Expect = 4e-20
Identities = 46/69 (66%), Positives = 57/69 (82%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKS AQ+TIKQNGY IYQTY+ PG FEISDL TSS+GDL V IKE+D S Y+VP++
Sbjct: 287 IAKSRAQVTIKQNGYVIYQTYMPPGPFEISDLNPTSSAGDLEVTIKESDNSETVYTVPYA 346
Query: 222 SVPLLQRQG 248
+VP+LQR+G
Sbjct: 347 AVPILQREG 355
Score = 37.9 bits (84), Expect = 0.38
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +2
Query: 230 ITPASGANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWSG 367
I G ++Y+ T+ +YR+NS Q+ Q L WG PW T G
Sbjct: 350 ILQREGHSKYSTTVGQYRSNSYNQKSPYIFQGELIWGLPWDITAYG 395
>UniRef50_P37924 Cluster: Outer membrane usher protein fimD
precursor; n=21; Enterobacteriaceae|Rep: Outer membrane
usher protein fimD precursor - Salmonella typhimurium
Length = 870
Score = 100 bits (239), Expect = 6e-20
Identities = 45/71 (63%), Positives = 59/71 (83%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++ A++TI+QNGY IYQ+YVSPGAF I+DL TSSSGDL V + E DGS Y+VP+S
Sbjct: 293 IARTAAKLTIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYS 352
Query: 222 SVPLLQRQGRI 254
+VPLLQR+GR+
Sbjct: 353 TVPLLQREGRV 363
>UniRef50_A0IJZ5 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=7; Enterobacteriaceae|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Serratia proteamaculans 568
Length = 840
Score = 99.5 bits (237), Expect = 1e-19
Identities = 43/71 (60%), Positives = 57/71 (80%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NAQ+ ++QNGY IY+TYV+PGAF I D+Y T SGDL V IKEADGS VPF+
Sbjct: 286 IARTNAQVVVRQNGYEIYRTYVAPGAFVIDDMYPTGGSGDLHVTIKEADGSEQQLVVPFA 345
Query: 222 SVPLLQRQGRI 254
S+P+LQR+GR+
Sbjct: 346 SLPVLQREGRL 356
>UniRef50_A1JKX5 Cluster: Outer membrane usher protein precursor;
n=4; Enterobacteriaceae|Rep: Outer membrane usher
protein precursor - Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081)
Length = 857
Score = 95.5 bits (227), Expect = 2e-18
Identities = 44/71 (61%), Positives = 54/71 (76%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNAQ+TI+QN IYQTYV PGAFEI+DL+ TSSSGDL V IKE DG S+ FS
Sbjct: 308 IADSNAQVTIRQNNNVIYQTYVPPGAFEINDLFPTSSSGDLEVTIKETDGRERSFKQAFS 367
Query: 222 SVPLLQRQGRI 254
S P++QR+G +
Sbjct: 368 SAPIMQREGSL 378
Score = 34.3 bits (75), Expect = 4.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 230 ITPASGANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWG-TTWSGL 370
I G+ +YA++ +YR N FAQ +L +G P+G T ++GL
Sbjct: 371 IMQREGSLKYALSAGQYRGGGNGSPTPNFAQTSLAYGMPYGFTLYNGL 418
>UniRef50_A6TGZ4 Cluster: Putative outer membrane usher protein;
n=1; Klebsiella pneumoniae subsp. pneumoniae MGH
78578|Rep: Putative outer membrane usher protein -
Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Length = 741
Score = 95.1 bits (226), Expect = 2e-18
Identities = 39/72 (54%), Positives = 62/72 (86%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++ A++++ QNGY+IY+T V+PGAFEI+DLY+T S+GDL V IKE+DGS ++ VPF+
Sbjct: 180 IARTTAEVSVYQNGYSIYKTTVAPGAFEINDLYATGSAGDLYVNIKESDGSEQNFVVPFA 239
Query: 222 SVPLLQRQGRIN 257
S+ +LQR+G+++
Sbjct: 240 SLAILQREGQLD 251
>UniRef50_A6T931 Cluster: Putative fimbrial biogenesis outer
membrane usher protein; n=1; Klebsiella pneumoniae
subsp. pneumoniae MGH 78578|Rep: Putative fimbrial
biogenesis outer membrane usher protein - Klebsiella
pneumoniae subsp. pneumoniae MGH 78578
Length = 833
Score = 94.7 bits (225), Expect = 3e-18
Identities = 38/71 (53%), Positives = 58/71 (81%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NAQ+T++QNGY +YQTYV+PGAF I DLY T+SSG+L V +KE+DG + ++ P++
Sbjct: 282 IARTNAQVTVRQNGYVLYQTYVTPGAFVIDDLYPTASSGNLEVAVKESDGEIRRFTQPYA 341
Query: 222 SVPLLQRQGRI 254
SV +QR+G +
Sbjct: 342 SVTSMQREGSL 352
>UniRef50_Q8ZRR6 Cluster: Putativie fimbrial usher; n=2;
Salmonella|Rep: Putativie fimbrial usher - Salmonella
typhimurium
Length = 848
Score = 94.3 bits (224), Expect = 4e-18
Identities = 41/70 (58%), Positives = 55/70 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNAQ+ ++QNGY YQT VSPG FEI+D++ T S+GD V +KEADGS + VP+S
Sbjct: 289 IARSNAQVIVRQNGYIAYQTAVSPGEFEINDMFPTGSNGDYDVTVKEADGSEQHFIVPYS 348
Query: 222 SVPLLQRQGR 251
S+P+LQR GR
Sbjct: 349 SLPILQRTGR 358
Score = 39.9 bits (89), Expect = 0.095
Identities = 20/46 (43%), Positives = 27/46 (58%)
Frame = +2
Query: 230 ITPASGANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWSG 367
I +G +Y+VT+ KYR +N + F QATL +G PWG T G
Sbjct: 352 ILQRTGRAKYSVTVGKYRDYNNHALDD-FGQATLLYGLPWGITLYG 396
>UniRef50_Q8ZJU1 Cluster: Putative fimbrial usher protein; n=3;
Salmonella|Rep: Putative fimbrial usher protein -
Salmonella typhimurium
Length = 845
Score = 94.3 bits (224), Expect = 4e-18
Identities = 42/71 (59%), Positives = 56/71 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKS+AQ+T++QNGYTIY+T V G F I+DLY T SGDL V IKE+DGS + VP++
Sbjct: 285 VAKSSAQVTVEQNGYTIYKTNVPAGPFAINDLYPTGGSGDLYVTIKESDGSEQHFIVPYA 344
Query: 222 SVPLLQRQGRI 254
SVP+LQR+G +
Sbjct: 345 SVPVLQREGHL 355
>UniRef50_A6TH60 Cluster: Putative fimbrial biogenesis outer
membrane usher protein; n=1; Klebsiella pneumoniae
subsp. pneumoniae MGH 78578|Rep: Putative fimbrial
biogenesis outer membrane usher protein - Klebsiella
pneumoniae subsp. pneumoniae MGH 78578
Length = 830
Score = 94.3 bits (224), Expect = 4e-18
Identities = 37/71 (52%), Positives = 58/71 (81%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AK+NA++ IKQNGY +YQTYV+PGAFEI+D+Y + SGDL V ++E+DGS + VPF+
Sbjct: 274 IAKTNARVVIKQNGYQVYQTYVAPGAFEITDMYPSGGSGDLYVSVEESDGSKQEFVVPFA 333
Query: 222 SVPLLQRQGRI 254
++P++ R+ ++
Sbjct: 334 TLPVMVRENQL 344
>UniRef50_A7ME55 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 846
Score = 93.1 bits (221), Expect = 1e-17
Identities = 41/71 (57%), Positives = 56/71 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A S+A++T++QNGY I++ V+PGAFEISDLY TS SGDL V IKEADG + PFS
Sbjct: 294 IANSSAEVTVRQNGYIIFRDTVAPGAFEISDLYPTSHSGDLEVTIKEADGKERRFIQPFS 353
Query: 222 SVPLLQRQGRI 254
+VP++QR G++
Sbjct: 354 AVPIMQRPGQV 364
>UniRef50_A6TCS3 Cluster: Putative export and assembly of type 1
fimbriae, usher; n=1; Klebsiella pneumoniae subsp.
pneumoniae MGH 78578|Rep: Putative export and assembly
of type 1 fimbriae, usher - Klebsiella pneumoniae subsp.
pneumoniae MGH 78578
Length = 829
Score = 93.1 bits (221), Expect = 1e-17
Identities = 39/70 (55%), Positives = 58/70 (82%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++T+ Q+GY IY+T+VSPGAF ISDLY TS SGDL V++ E++G+V +++ P+S
Sbjct: 276 VAHSNAKVTVSQHGYVIYETFVSPGAFAISDLYPTSQSGDLEVKVTESNGAVRTFTQPYS 335
Query: 222 SVPLLQRQGR 251
+VP + R+GR
Sbjct: 336 AVPYMLREGR 345
>UniRef50_Q62KN8 Cluster: Outer membrane usher protein; n=15;
Burkholderia|Rep: Outer membrane usher protein -
Burkholderia mallei (Pseudomonas mallei)
Length = 850
Score = 91.9 bits (218), Expect = 2e-17
Identities = 41/69 (59%), Positives = 54/69 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NAQ+TI+QNG+ IY TYV PG F I DLY TSSSG+L V I EADG V +++ P+S
Sbjct: 295 VAQTNAQVTIRQNGFVIYSTYVPPGPFTIDDLYPTSSSGNLEVTITEADGHVTTFTQPYS 354
Query: 222 SVPLLQRQG 248
+VP+L R G
Sbjct: 355 AVPMLLRDG 363
>UniRef50_UPI00015C6227 Cluster: hypothetical protein CKO_04372;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_04372 - Citrobacter koseri ATCC BAA-895
Length = 833
Score = 91.5 bits (217), Expect = 3e-17
Identities = 39/70 (55%), Positives = 57/70 (81%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NAQ+TI+Q G I+Q+YV PG F I DLY T++SGDL V ++EADGSV+ + PFS
Sbjct: 284 IAQTNAQVTIRQGGNVIWQSYVPPGPFAIDDLYPTTASGDLEVAVREADGSVHQFIQPFS 343
Query: 222 SVPLLQRQGR 251
+VP++QR+G+
Sbjct: 344 AVPVMQREGQ 353
Score = 38.7 bits (86), Expect = 0.22
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +2
Query: 245 GANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWSGLT 373
G +YA+ KYR +++ +E +F Q TL +G PW +T G T
Sbjct: 352 GQFKYALAAGKYRAANSKDKEPEFLQGTLSYGLPWDSTIYGGT 394
>UniRef50_A4WBN9 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=2; Enterobacteriaceae|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Enterobacter sp. 638
Length = 851
Score = 89.0 bits (211), Expect = 2e-16
Identities = 38/71 (53%), Positives = 56/71 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA+++++QNGY IYQ V+PGAF I DLYST++SGDL V +KEADG+ + ++ P+S
Sbjct: 293 IASSNAEVSVRQNGYLIYQQNVAPGAFAIDDLYSTTNSGDLEVTVKEADGTEHRFTQPYS 352
Query: 222 SVPLLQRQGRI 254
SV ++QR +
Sbjct: 353 SVAVMQRPDHV 363
>UniRef50_P46009 Cluster: Outer membrane usher protein focD
precursor; n=50; Enterobacteriaceae|Rep: Outer membrane
usher protein focD precursor - Escherichia coli
Length = 875
Score = 88.6 bits (210), Expect = 2e-16
Identities = 37/71 (52%), Positives = 56/71 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+++ ++I+I+QNGY IYQ+ + PG FEI+D+Y S GDL V ++EADGSV ++VP+S
Sbjct: 303 ISRGTSRISIRQNGYEIYQSTLPPGPFEINDIYPAGSGGDLQVTLQEADGSVQRFNVPWS 362
Query: 222 SVPLLQRQGRI 254
SVP+LQR+G +
Sbjct: 363 SVPVLQREGHL 373
>UniRef50_P42915 Cluster: Uncharacterized outer membrane usher
protein yraJ precursor; n=14; Enterobacteriaceae|Rep:
Uncharacterized outer membrane usher protein yraJ
precursor - Escherichia coli (strain K12)
Length = 838
Score = 87.4 bits (207), Expect = 5e-16
Identities = 39/71 (54%), Positives = 56/71 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A S+A +TI+QNGY IYQ+ VS GAFEI+DLY +S+SGDL V I+E+DG+ + P+S
Sbjct: 296 IANSSAIVTIRQNGYVIYQSNVSAGAFEINDLYPSSNSGDLEVTIEESDGTQRRFIQPYS 355
Query: 222 SVPLLQRQGRI 254
S+P++QR G +
Sbjct: 356 SLPMMQRPGHL 366
>UniRef50_A4Y249 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=2; Shewanella putrefaciens|Rep:
Fimbrial biogenesis outer membrane usher protein
precursor - Shewanella putrefaciens CN-32
Length = 850
Score = 87.0 bits (206), Expect = 6e-16
Identities = 41/70 (58%), Positives = 54/70 (77%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++ A++ IKQNG IYQT V+ G FEI+DLY T+ GDLLVEI EADG V+S++VPFS
Sbjct: 286 IAQTTAKVVIKQNGREIYQTTVAAGPFEINDLYPTNYQGDLLVEITEADGRVSSFTVPFS 345
Query: 222 SVPLLQRQGR 251
+VP R G+
Sbjct: 346 AVPGSMRAGQ 355
>UniRef50_A3I8F4 Cluster: ABC transporter, membrane spanning
protein; n=1; Bacillus sp. B14905|Rep: ABC transporter,
membrane spanning protein - Bacillus sp. B14905
Length = 296
Score = 87.0 bits (206), Expect = 6e-16
Identities = 39/70 (55%), Positives = 52/70 (74%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A+ NA++P VT GLQFG LLGG+++VE+VF+WPG+GRL+VDS+ RD
Sbjct: 197 KGIREWLVIIKHAFRNALLPTVTFVGLQFGGLLGGAVIVEQVFSWPGIGRLIVDSINQRD 256
Query: 536 YPVIQAEILL 507
YPV+Q I+L
Sbjct: 257 YPVVQGGIIL 266
Score = 34.3 bits (75), Expect = 4.7
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -2
Query: 534 PGDSGGNSAFSLEFILINLVVDVLYAAINPAIR 436
P GG +L IL+NL+VD+ Y+ INP IR
Sbjct: 258 PVVQGGIILLALIMILVNLIVDLCYSLINPKIR 290
>UniRef50_A1RPW6 Cluster: Fimbrial biogenesis outer membrane usher
protein; n=2; Shewanella|Rep: Fimbrial biogenesis outer
membrane usher protein - Shewanella sp. (strain W3-18-1)
Length = 839
Score = 87.0 bits (206), Expect = 6e-16
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
LA S A + IKQNG +IYQT V+ G F I+DL+ TS GDLLVEI EADG V+S++VPFS
Sbjct: 267 LANSTASVVIKQNGVSIYQTTVAAGPFVINDLFPTSYEGDLLVEISEADGKVSSFTVPFS 326
Query: 222 SVPLLQRQG 248
+VP R+G
Sbjct: 327 AVPGSLREG 335
>UniRef50_UPI00005F80A3 Cluster: COG3188: P pilus assembly protein,
porin PapC; n=2; Yersinia|Rep: COG3188: P pilus assembly
protein, porin PapC - Yersinia mollaretii ATCC 43969
Length = 700
Score = 86.6 bits (205), Expect = 8e-16
Identities = 40/70 (57%), Positives = 54/70 (77%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+S+A +T++QNG IYQT VSPG F ++DLY TSS GDL V I+EA+G+ Y+VPF+
Sbjct: 135 IARSSATVTVRQNGNIIYQTSVSPGEFVLNDLYPTSSGGDLSVTIQEANGTETHYTVPFA 194
Query: 222 SVPLLQRQGR 251
SVP L R G+
Sbjct: 195 SVPNLVRPGQ 204
>UniRef50_Q0HR82 Cluster: Fimbrial biogenesis outer membrane usher
protein; n=1; Shewanella sp. MR-7|Rep: Fimbrial
biogenesis outer membrane usher protein - Shewanella sp.
(strain MR-7)
Length = 859
Score = 86.6 bits (205), Expect = 8e-16
Identities = 36/71 (50%), Positives = 54/71 (76%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++ I QNG IY T+V PG FEISDL++T+ GDL V + E+DG+ Y VPF+
Sbjct: 289 IARTNAEVQIHQNGRKIYSTFVYPGNFEISDLFATAGGGDLTVTVVESDGNTQRYEVPFA 348
Query: 222 SVPLLQRQGRI 254
S+P+L+R+G +
Sbjct: 349 SLPVLRREGSL 359
>UniRef50_Q7AFL4 Cluster: Putative outer membrane usher protein;
n=2; Escherichia coli O157:H7|Rep: Putative outer
membrane usher protein - Escherichia coli O157:H7
Length = 840
Score = 85.4 bits (202), Expect = 2e-15
Identities = 39/69 (56%), Positives = 54/69 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++++ QNG+ IYQT V+PG FEI+DLY TS SGDL V + EA+G+V+ +SVPFS
Sbjct: 286 VAATNARVSVMQNGHEIYQTTVAPGPFEINDLYPTSYSGDLDVTVTEANGAVSRFSVPFS 345
Query: 222 SVPLLQRQG 248
+VP R G
Sbjct: 346 AVPESMRPG 354
>UniRef50_UPI00015C61E6 Cluster: hypothetical protein CKO_04363;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_04363 - Citrobacter koseri ATCC BAA-895
Length = 615
Score = 84.6 bits (200), Expect = 3e-15
Identities = 36/71 (50%), Positives = 53/71 (74%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A NA +TI QNGY IY+ V PG FEI+DL ++SGDL + + EA+G VN ++VP++
Sbjct: 290 MADDNADVTISQNGYVIYKATVPPGPFEINDLNPMAASGDLSITVSEANGKVNVFTVPYT 349
Query: 222 SVPLLQRQGRI 254
S+P+L R+GR+
Sbjct: 350 SMPILLRKGRM 360
Score = 43.6 bits (98), Expect = 0.008
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = +2
Query: 245 GANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWGTTWSG 367
G +Y +TLA++R S+ + F Q TL WGGP GTT+ G
Sbjct: 358 GRMKYGLTLARFRGMSSRYGDPLFMQGTLVWGGPGGTTFYG 398
>UniRef50_UPI00005F9F29 Cluster: COG3188: P pilus assembly protein,
porin PapC; n=1; Yersinia intermedia ATCC 29909|Rep:
COG3188: P pilus assembly protein, porin PapC - Yersinia
intermedia ATCC 29909
Length = 832
Score = 84.6 bits (200), Expect = 3e-15
Identities = 38/69 (55%), Positives = 53/69 (76%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A + A++++ Q+G IYQT V+PGAF I DLY TS GDL+VE++EADG V+S++VPFS
Sbjct: 268 VASTTAKVSVSQSGMQIYQTTVAPGAFVIDDLYPTSFQGDLVVEVQEADGRVSSFTVPFS 327
Query: 222 SVPLLQRQG 248
+VP R G
Sbjct: 328 AVPDSMRPG 336
>UniRef50_P45997 Cluster: Outer membrane usher protein hifC
precursor; n=15; Haemophilus|Rep: Outer membrane usher
protein hifC precursor - Haemophilus influenzae
Length = 837
Score = 84.2 bits (199), Expect = 4e-15
Identities = 39/71 (54%), Positives = 53/71 (74%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA+++IKQNGYTIYQ V G F I+DLY++ SGDL VEI+E+DG V S+ VPFS
Sbjct: 288 VANTNAKVSIKQNGYTIYQITVPAGPFVINDLYASGYSGDLTVEIQESDGKVRSFIVPFS 347
Query: 222 SVPLLQRQGRI 254
++ L R G +
Sbjct: 348 NLAPLMRVGHL 358
>UniRef50_A0VDM5 Cluster: Fimbrial biogenesis outer membrane usher
protein; n=5; Burkholderiales|Rep: Fimbrial biogenesis
outer membrane usher protein - Delftia acidovorans SPH-1
Length = 1040
Score = 83.8 bits (198), Expect = 6e-15
Identities = 37/70 (52%), Positives = 54/70 (77%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++TI QNG +Y+T V+PGAF I+DLY T GDL V I EA+G+V S++VP++
Sbjct: 335 VANTNARVTITQNGIKLYETTVAPGAFVINDLYPTGYGGDLQVSITEANGAVRSFAVPYA 394
Query: 222 SVPLLQRQGR 251
+VPL R+G+
Sbjct: 395 AVPLSLREGQ 404
>UniRef50_Q1LQW6 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=1; Ralstonia metallidurans
CH34|Rep: Fimbrial biogenesis outer membrane usher
protein precursor - Ralstonia metallidurans (strain CH34
/ ATCC 43123 / DSM 2839)
Length = 852
Score = 83.4 bits (197), Expect = 8e-15
Identities = 37/69 (53%), Positives = 53/69 (76%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA++T+ QNG +Y+T V+PG FEI DLY+T G+LLV + EADGS +S++VP++
Sbjct: 295 VARSNARVTVTQNGNKLYETTVAPGPFEIKDLYATGYGGNLLVTVTEADGSQSSFTVPYA 354
Query: 222 SVPLLQRQG 248
SV L R G
Sbjct: 355 SVAQLLRPG 363
>UniRef50_UPI00005F9B12 Cluster: COG3188: P pilus assembly protein,
porin PapC; n=2; Yersinia|Rep: COG3188: P pilus assembly
protein, porin PapC - Yersinia frederiksenii ATCC 33641
Length = 824
Score = 83.0 bits (196), Expect = 1e-14
Identities = 35/69 (50%), Positives = 54/69 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA++T++QNG +YQTYV+PG F ++DL + SSGDL V I EADGS+ + +V +S
Sbjct: 260 VAQSNARVTVRQNGNIVYQTYVAPGPFTLNDLGQSGSSGDLTVTITEADGSIRTQTVAYS 319
Query: 222 SVPLLQRQG 248
++P++ R G
Sbjct: 320 TLPVMLRPG 328
>UniRef50_A4TJY7 Cluster: Fimbrial usher protein precursor; n=13;
Yersinia|Rep: Fimbrial usher protein precursor -
Yersinia pestis (strain Pestoides F)
Length = 863
Score = 82.6 bits (195), Expect = 1e-14
Identities = 39/69 (56%), Positives = 51/69 (73%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++ + QN +IYQT VSPGAFE +DL T GDL VEI EADGSV+++ VPF+
Sbjct: 283 IARTNARVMVYQNNRSIYQTTVSPGAFEFNDLSVTHFGGDLTVEINEADGSVSTFQVPFA 342
Query: 222 SVPLLQRQG 248
SVP R G
Sbjct: 343 SVPESLRPG 351
>UniRef50_Q7N9P7 Cluster: Similar to outer membrane usher protein;
n=2; Enterobacteriaceae|Rep: Similar to outer membrane
usher protein - Photorhabdus luminescens subsp.
laumondii
Length = 876
Score = 82.2 bits (194), Expect = 2e-14
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNAQIT+ QNG IYQT V+PG F I+DL +S GDL V I EADG+ + ++ +S
Sbjct: 306 IAKSNAQITVTQNGSVIYQTNVAPGPFRITDLVGSSVGGDLQVTITEADGTHHGFTQAYS 365
Query: 222 SVPLLQRQGR 251
S+P++ RQG+
Sbjct: 366 SLPMMLRQGQ 375
>UniRef50_A7MJW8 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 829
Score = 82.2 bits (194), Expect = 2e-14
Identities = 35/71 (49%), Positives = 56/71 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+S+A++T+ QNG +IY+T V PG FEI D+Y T S+G+L V +KE+DGS ++ VPF+
Sbjct: 262 IARSDAEVTVYQNGNSIYKTSVPPGPFEIDDIYPTGSAGNLNVTVKESDGSEQNFVVPFA 321
Query: 222 SVPLLQRQGRI 254
S+ +LQR+ ++
Sbjct: 322 SLAVLQREHQL 332
>UniRef50_Q7CKZ7 Cluster: Outer membrane usher protein FIMD; n=12;
Yersinia|Rep: Outer membrane usher protein FIMD -
Yersinia pestis
Length = 875
Score = 81.8 bits (193), Expect = 2e-14
Identities = 38/69 (55%), Positives = 54/69 (78%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++ I+QNG IY+T V+PG F I+DL+STSS GDL VE+ EA+GS ++++VPFS
Sbjct: 314 VASTNARVIIRQNGREIYETNVAPGPFVINDLFSTSSQGDLNVEVIEANGSRSTFTVPFS 373
Query: 222 SVPLLQRQG 248
+VP R G
Sbjct: 374 AVPDSMRPG 382
>UniRef50_Q31G29 Cluster: ATP-binding cassette superfamily
transporter, permease component; n=3;
Proteobacteria|Rep: ATP-binding cassette superfamily
transporter, permease component - Thiomicrospira
crunogena (strain XCL-2)
Length = 307
Score = 81.8 bits (193), Expect = 2e-14
Identities = 35/55 (63%), Positives = 47/55 (85%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PV+T GLQ G LLGG+++ E VF+WPGLG+LLVDS++ RDYPV+QA IL+
Sbjct: 226 NALLPVITILGLQLGTLLGGAVITEVVFDWPGLGQLLVDSIQRRDYPVVQACILV 280
>UniRef50_Q8VPB7 Cluster: LpfC; n=10; Enterobacteriaceae|Rep: LpfC -
Escherichia coli
Length = 840
Score = 81.4 bits (192), Expect = 3e-14
Identities = 37/70 (52%), Positives = 53/70 (75%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNA + I+QNGY IYQ+ V GAFEI+DL + S+ GDL V IKE DGS ++ P++
Sbjct: 282 IAKSNATVIIRQNGYVIYQSAVPQGAFEITDLNTASTGGDLDVTIKEEDGSEQRFTQPYA 341
Query: 222 SVPLLQRQGR 251
S+ +L+R+G+
Sbjct: 342 SLAILKREGQ 351
>UniRef50_Q7NYH8 Cluster: Outer membrane usher protein; n=1;
Chromobacterium violaceum|Rep: Outer membrane usher
protein - Chromobacterium violaceum
Length = 851
Score = 81.0 bits (191), Expect = 4e-14
Identities = 38/83 (45%), Positives = 56/83 (67%), Gaps = 3/83 (3%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA+++++QNG IY+ V PG F I DLY+T SGDL V + EADG V + VP++
Sbjct: 307 VAETNAKVSVRQNGNLIYENVVPPGEFSIDDLYNTGFSGDLEVTVTEADGRVRKFVVPYA 366
Query: 222 SVPLLQRQGRIN---TR*HWRNT 281
SVP L R+G+ T WR++
Sbjct: 367 SVPQLLREGQSRYAVTAGQWRDS 389
>UniRef50_Q5PDB3 Cluster: Outer membrane usher protein; n=2;
Enterobacteriaceae|Rep: Outer membrane usher protein -
Salmonella paratyphi-a
Length = 865
Score = 81.0 bits (191), Expect = 4e-14
Identities = 38/69 (55%), Positives = 51/69 (73%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++T+ Q+G IY+T V PGAFEI+DL +T DLLV ++EADGS S++VPFS
Sbjct: 288 VANSNAKVTVMQSGNKIYETTVPPGAFEINDLSTTGYGNDLLVTVEEADGSKRSFTVPFS 347
Query: 222 SVPLLQRQG 248
SV + R G
Sbjct: 348 SVTQMLRPG 356
>UniRef50_A0THS4 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=1; Burkholderia ambifaria
MC40-6|Rep: Fimbrial biogenesis outer membrane usher
protein precursor - Burkholderia ambifaria MC40-6
Length = 887
Score = 80.6 bits (190), Expect = 6e-14
Identities = 39/69 (56%), Positives = 49/69 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA++ IKQNG IYQT V+PG FEI DL T GDL V + EADG S+SVP++
Sbjct: 310 VAQSNAKVEIKQNGAVIYQTTVAPGPFEIRDLNPTGYGGDLEVTVTEADGFKKSFSVPYA 369
Query: 222 SVPLLQRQG 248
+VP L R G
Sbjct: 370 TVPQLLRPG 378
>UniRef50_Q7N8E3 Cluster: Similar to outer membrane usher protein;
n=2; Photorhabdus luminescens subsp. laumondii|Rep:
Similar to outer membrane usher protein - Photorhabdus
luminescens subsp. laumondii
Length = 880
Score = 79.8 bits (188), Expect = 1e-13
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NAQ+T+ QNG IYQT V+PG F +DLYST S+GDL V +KE +G ++ S
Sbjct: 318 VANANAQVTVSQNGNIIYQTTVAPGPFRFTDLYSTGSAGDLTVTVKEENGRTRVSTIASS 377
Query: 222 SVPLLQRQGRI 254
S+P++QR G +
Sbjct: 378 SLPVMQRPGGV 388
>UniRef50_Q5PL29 Cluster: Probable outer membrane fimbrial usher
protein; n=4; Salmonella|Rep: Probable outer membrane
fimbrial usher protein - Salmonella paratyphi-a
Length = 829
Score = 79.0 bits (186), Expect = 2e-13
Identities = 37/71 (52%), Positives = 53/71 (74%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNAQ+T+ QNG +YQT VSPG FE+ DL S + SG+L V ++E+DGSV ++ V +
Sbjct: 280 IANSNAQVTVSQNGRILYQTRVSPGPFELPDL-SQNISGNLDVSVRESDGSVRTWQVNTA 338
Query: 222 SVPLLQRQGRI 254
SVP + RQG++
Sbjct: 339 SVPFIARQGQV 349
>UniRef50_A6W3S2 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Marinomonas
sp. MWYL1
Length = 307
Score = 78.2 bits (184), Expect = 3e-13
Identities = 40/77 (51%), Positives = 49/77 (63%)
Frame = -3
Query: 737 IMVPRGXKGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLV 558
IMV R KG A N IP++T GLQFG LLGG +++E+VFNWPGLG L
Sbjct: 206 IMVARA-KGLSENKVLYKHALRNCAIPLITYFGLQFGGLLGGIVIIERVFNWPGLGTLAF 264
Query: 557 DSVEMRDYPVIQAEILL 507
D+V RDYPV+QA I +
Sbjct: 265 DAVSGRDYPVLQAVITI 281
>UniRef50_A6X5K5 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Ochrobactrum
anthropi ATCC 49188|Rep: Binding-protein-dependent
transport systems inner membrane component -
Ochrobactrum anthropi (strain ATCC 49188 / DSM 6882 /
NCTC 12168)
Length = 319
Score = 77.8 bits (183), Expect = 4e-13
Identities = 41/77 (53%), Positives = 49/77 (63%)
Frame = -3
Query: 737 IMVPRGXKGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLV 558
IMV R KG A N IP++T GLQFG LLGG +VVE+VFNWPG+G L
Sbjct: 218 IMVARA-KGLSENKVLYKHALRNCAIPLITYLGLQFGGLLGGIVVVERVFNWPGMGTLAF 276
Query: 557 DSVEMRDYPVIQAEILL 507
D+V RDYPV+QA I +
Sbjct: 277 DAVAGRDYPVLQATIAI 293
>UniRef50_A6TDX6 Cluster: Putative fimbrial biogenesis outer
membrane usher protein; n=1; Klebsiella pneumoniae
subsp. pneumoniae MGH 78578|Rep: Putative fimbrial
biogenesis outer membrane usher protein - Klebsiella
pneumoniae subsp. pneumoniae MGH 78578
Length = 869
Score = 77.8 bits (183), Expect = 4e-13
Identities = 32/69 (46%), Positives = 50/69 (72%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++T++QNG +Y+TYV+PG F I+D+ SGD V++ EADG+ + VP+S
Sbjct: 304 VANSNARVTVRQNGNVVYETYVAPGPFYINDIQQAGLSGDYDVKVTEADGTERQFIVPYS 363
Query: 222 SVPLLQRQG 248
S+P++ R G
Sbjct: 364 SLPVMLRPG 372
>UniRef50_Q8TKE4 Cluster: ABC transporter, permease protein; n=4;
Methanosarcina|Rep: ABC transporter, permease protein -
Methanosarcina acetivorans
Length = 313
Score = 77.8 bits (183), Expect = 4e-13
Identities = 30/57 (52%), Positives = 47/57 (82%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NA++PV+T G+QFG+LLGG+++VE +F+WPG+G+LLVDS+ RD+ ++Q +L
Sbjct: 227 ALKNALLPVITFAGMQFGYLLGGAVIVESIFSWPGIGKLLVDSIFARDFSMVQGCVL 283
>UniRef50_Q9I4X5 Cluster: Usher CupC3; n=8; Proteobacteria|Rep:
Usher CupC3 - Pseudomonas aeruginosa
Length = 839
Score = 77.4 bits (182), Expect = 5e-13
Identities = 33/71 (46%), Positives = 51/71 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA + + QNG+ IY T V PGAFEI+D+Y + S+GDL V+I EADG S+ +S
Sbjct: 292 IAETNATVEVSQNGFVIYSTNVPPGAFEITDIYPSGSNGDLEVKIIEADGRQRSFKQSYS 351
Query: 222 SVPLLQRQGRI 254
+P++ R+G +
Sbjct: 352 YLPVMTRKGNL 362
>UniRef50_UPI00015C63E2 Cluster: hypothetical protein CKO_05122;
n=1; Citrobacter koseri ATCC BAA-895|Rep: hypothetical
protein CKO_05122 - Citrobacter koseri ATCC BAA-895
Length = 847
Score = 77.0 bits (181), Expect = 7e-13
Identities = 36/69 (52%), Positives = 48/69 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA +++ Q G IYQT V PGAF I DLY + GDLLV IKEADGS +S++V ++
Sbjct: 294 VANTNALVSVSQRGARIYQTTVPPGAFRIDDLYPNGTDGDLLVTIKEADGSEHSFTVTYA 353
Query: 222 SVPLLQRQG 248
S+ L R G
Sbjct: 354 SIAELLRPG 362
>UniRef50_Q9PH65 Cluster: Outer membrane usher protein; n=5;
Xanthomonadaceae|Rep: Outer membrane usher protein -
Xylella fastidiosa
Length = 901
Score = 77.0 bits (181), Expect = 7e-13
Identities = 36/69 (52%), Positives = 45/69 (65%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA++ I QNG IY T V+PGAF I DLY T GDL V + E DG +SVP+
Sbjct: 354 IAQSNARVEIHQNGQLIYSTTVAPGAFVIDDLYPTGYGGDLQVTVYETDGRQQQFSVPYG 413
Query: 222 SVPLLQRQG 248
SVP + R G
Sbjct: 414 SVPQMLRAG 422
>UniRef50_Q6FFQ9 Cluster: Putative outer membrane usher protein;
n=1; Acinetobacter sp. ADP1|Rep: Putative outer membrane
usher protein - Acinetobacter sp. (strain ADP1)
Length = 869
Score = 77.0 bits (181), Expect = 7e-13
Identities = 35/71 (49%), Positives = 52/71 (73%)
Frame = +3
Query: 45 AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSS 224
A++NA+++I+QNG IYQ V+PG FEI DLY T+ G+L V + EADG+V+++ VP+++
Sbjct: 306 AQTNAKVSIEQNGREIYQISVAPGPFEIKDLYPTNFEGNLKVVVTEADGTVHTHDVPYAA 365
Query: 225 VPLLQRQGRIN 257
VP R G N
Sbjct: 366 VPNSLRAGLYN 376
>UniRef50_Q1ZU82 Cluster: Putative fimbrial usher protein; n=1;
Vibrio angustum S14|Rep: Putative fimbrial usher protein
- Vibrio angustum S14
Length = 827
Score = 77.0 bits (181), Expect = 7e-13
Identities = 34/74 (45%), Positives = 54/74 (72%)
Frame = +3
Query: 30 DTVDLAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYS 209
D +AKS A +++ Q+G+ +YQT+V+ G F I D+ S + +GDL V +KEADGS +S+
Sbjct: 274 DIRGVAKSEATVSVYQDGFKVYQTHVASGPFVIRDINSLTGNGDLKVIVKEADGSTHSFI 333
Query: 210 VPFSSVPLLQRQGR 251
VP++S PLL+R+ +
Sbjct: 334 VPYASSPLLKRENQ 347
>UniRef50_A0IPA4 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=6; Enterobacteriaceae|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Serratia proteamaculans 568
Length = 871
Score = 77.0 bits (181), Expect = 7e-13
Identities = 34/69 (49%), Positives = 52/69 (75%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++ I+QNGYTIY T V PG F ++D++ ++ SG+L V + EA+GS ++ VPFS
Sbjct: 291 VASTNARVEIRQNGYTIYSTNVPPGPFALTDIFPSTLSGNLNVTVIEANGSRTTFVVPFS 350
Query: 222 SVPLLQRQG 248
SVP + R+G
Sbjct: 351 SVPNMLREG 359
>UniRef50_A7MQC5 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 820
Score = 76.6 bits (180), Expect = 9e-13
Identities = 37/71 (52%), Positives = 49/71 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNA++T+++NGY IYQ V PG F ISDL S S G L V + EADGS ++ +S
Sbjct: 276 IAKSNARVTVRENGYVIYQRSVPPGPFVISDLASVSDGGKLDVVVTEADGSETHNTLAYS 335
Query: 222 SVPLLQRQGRI 254
SVP L R G++
Sbjct: 336 SVPQLLRTGQM 346
>UniRef50_A0GEL0 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=2; Burkholderia|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Burkholderia phytofirmans PsJN
Length = 886
Score = 76.6 bits (180), Expect = 9e-13
Identities = 35/69 (50%), Positives = 50/69 (72%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA++T++QNG IY+T VSPGAFEI+DLY T G+L V + EADG +++V ++
Sbjct: 319 IAESNARVTVRQNGQVIYETTVSPGAFEINDLYPTGYGGNLDVTVTEADGRKKNFTVAYA 378
Query: 222 SVPLLQRQG 248
SV R G
Sbjct: 379 SVAQSLRPG 387
>UniRef50_Q28JR5 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Jannaschia sp.
CCS1|Rep: Binding-protein-dependent transport systems
inner membrane component - Jannaschia sp. (strain CCS1)
Length = 324
Score = 76.2 bits (179), Expect = 1e-12
Identities = 32/55 (58%), Positives = 45/55 (81%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA +PVVT GL+FGFLLGG +VVE VF++PG+GRL+ +++ RD PV+QA ++L
Sbjct: 245 NAWLPVVTMIGLEFGFLLGGVVVVETVFSYPGIGRLVFNAINQRDIPVVQASVIL 299
>UniRef50_Q11EZ9 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Mesorhizobium sp.
BNC1|Rep: Binding-protein-dependent transport systems
inner membrane component - Mesorhizobium sp. (strain
BNC1)
Length = 306
Score = 76.2 bits (179), Expect = 1e-12
Identities = 35/56 (62%), Positives = 43/56 (76%)
Frame = -3
Query: 674 VNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
VNA P VT GLQ G +L GSIV E +FNWPG+GRLL+ +V+ RDYP+IQA IL+
Sbjct: 225 VNAAAPTVTVVGLQTGLVLAGSIVTETIFNWPGVGRLLIRAVQARDYPMIQALILV 280
>UniRef50_Q8TJ82 Cluster: Oligopeptide ABC transporter, permease
protein; n=1; Methanosarcina acetivorans|Rep:
Oligopeptide ABC transporter, permease protein -
Methanosarcina acetivorans
Length = 319
Score = 76.2 bits (179), Expect = 1e-12
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A+ NA +PVVT GL G LLGG++++E++F WPG+G L+ SV RD
Sbjct: 219 KGLREREVVVKHAFRNASVPVVTQAGLDIGTLLGGTVIIEQIFGWPGIGNFLLTSVMSRD 278
Query: 536 YPVIQAEILL 507
YPVI +LL
Sbjct: 279 YPVIAGFVLL 288
>UniRef50_P33341 Cluster: Uncharacterized outer membrane usher
protein yehB precursor; n=35; Enterobacteriaceae|Rep:
Uncharacterized outer membrane usher protein yehB
precursor - Escherichia coli (strain K12)
Length = 826
Score = 76.2 bits (179), Expect = 1e-12
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA +TI+QNG+ +YQ V PG F I+DL DL V +KEADGSV +Y VP++
Sbjct: 268 IAQSNALVTIEQNGFVVYQKEVPPGPFAITDLQLAGGGADLDVSVKEADGSVTTYLVPYA 327
Query: 222 SVPLLQRQG 248
+VP + + G
Sbjct: 328 AVPNMLQPG 336
>UniRef50_Q2L0Z7 Cluster: Putative fimbrial usher precursor; n=1;
Bordetella avium 197N|Rep: Putative fimbrial usher
precursor - Bordetella avium (strain 197N)
Length = 840
Score = 75.8 bits (178), Expect = 2e-12
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+ N+++TI+QNG +Y T+V G F I DLYST GDL VEI+E G Y PF+
Sbjct: 285 IAQGNSKVTIRQNGVVLYSTFVPAGPFVIDDLYSTPGGGDLEVEIEEIGGRTTRYFQPFA 344
Query: 222 SVPLLQRQG 248
++P++ R+G
Sbjct: 345 ALPVMMREG 353
>UniRef50_Q0JZF2 Cluster: Outer membrane fimbrial usher porin, FUP
family precursor; n=5; Cupriavidus|Rep: Outer membrane
fimbrial usher porin, FUP family precursor - Ralstonia
eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 877
Score = 75.8 bits (178), Expect = 2e-12
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++ ++Q G TIY+T V+PGAFEI+DLY T GDL V + EADGSV++ VP++
Sbjct: 319 IANSNARVQVRQGGNTIYETTVAPGAFEINDLYPTGYGGDLEVVVTEADGSVHTSRVPYA 378
Query: 222 SVPLLQRQG 248
+ R G
Sbjct: 379 AAVNALRPG 387
>UniRef50_A6T5S2 Cluster: Putative outer membrane protein; n=1;
Klebsiella pneumoniae subsp. pneumoniae MGH 78578|Rep:
Putative outer membrane protein - Klebsiella pneumoniae
subsp. pneumoniae MGH 78578
Length = 811
Score = 75.8 bits (178), Expect = 2e-12
Identities = 32/71 (45%), Positives = 51/71 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++T+ QNG +Y+ V PG F DLY T++ GDL V I EADGS ++++VP++
Sbjct: 266 VARTNARVTVTQNGALLYEATVPPGKFTFDDLYPTNAGGDLQVTIHEADGSQDTFTVPYA 325
Query: 222 SVPLLQRQGRI 254
++P L R G +
Sbjct: 326 TLPGLVRAGAV 336
>UniRef50_Q8TTX4 Cluster: Oligopeptide ABC transporter, permease
protein; n=3; Methanosarcina|Rep: Oligopeptide ABC
transporter, permease protein - Methanosarcina
acetivorans
Length = 313
Score = 75.8 bits (178), Expect = 2e-12
Identities = 32/57 (56%), Positives = 43/57 (75%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NAM+PV+T G Q G LLGG++V+EK+F WPG+G LLVDS+ RD P++Q +L
Sbjct: 230 ALKNAMLPVITVIGFQMGSLLGGAVVIEKIFAWPGIGSLLVDSISARDLPMVQGCVL 286
>UniRef50_UPI00005FA14E Cluster: COG3188: P pilus assembly protein,
porin PapC; n=3; Yersinia|Rep: COG3188: P pilus assembly
protein, porin PapC - Yersinia intermedia ATCC 29909
Length = 872
Score = 75.4 bits (177), Expect = 2e-12
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA +T++Q+G +Y+T VSPG F I DLY T G+L V ++EADGS ++ VPF+
Sbjct: 307 IARTNALVTVRQSGQVLYETTVSPGEFIIDDLYPTGYGGNLDVTVREADGSTQNFQVPFA 366
Query: 222 SVPLLQRQG 248
+V L R G
Sbjct: 367 AVAQLLRPG 375
>UniRef50_Q9KGM9 Cluster: Oligopeptide ABC transporter; n=8;
Firmicutes|Rep: Oligopeptide ABC transporter - Bacillus
halodurans
Length = 314
Score = 75.4 bits (177), Expect = 2e-12
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A NA+IPVVT G+QFGFLLGGS++ E+VF GLGRL+++++ RD
Sbjct: 219 KGVKERVVVYRHALKNALIPVVTVVGIQFGFLLGGSVLTEQVFAINGLGRLIIEAIRQRD 278
Query: 536 YPVIQAEILL 507
+PV+Q +L+
Sbjct: 279 FPVVQGAVLV 288
>UniRef50_A6AJW5 Cluster: Outer membrane fimbrial usher protein;
n=1; Vibrio harveyi HY01|Rep: Outer membrane fimbrial
usher protein - Vibrio harveyi HY01
Length = 822
Score = 75.4 bits (177), Expect = 2e-12
Identities = 39/71 (54%), Positives = 49/71 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A + A + IKQ G I +T V PG F ISDL T S G+L V I EADGSV+S++VP+S
Sbjct: 273 VASTYAHVVIKQQGKVIKETDVPPGPFVISDLNDTKSDGELEVFIHEADGSVSSFNVPYS 332
Query: 222 SVPLLQRQGRI 254
SVPL R G+I
Sbjct: 333 SVPLSIRPGQI 343
>UniRef50_Q47198 Cluster: Transmembrane protein; n=5; Escherichia
coli|Rep: Transmembrane protein - Escherichia coli
Length = 822
Score = 74.9 bits (176), Expect = 3e-12
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++T++QNG IY+T V G F ISDLY + GDL V + E+DG S+ VPF+
Sbjct: 265 MAGSNARVTVRQNGNIIYETTVPAGPFSISDLYPSGYGGDLTVTVTESDGQTRSFIVPFA 324
Query: 222 SVPLLQRQG 248
SV L R G
Sbjct: 325 SVAQLVRPG 333
>UniRef50_A1JTM9 Cluster: Outer membrane usher protein precursor;
n=15; Enterobacteriaceae|Rep: Outer membrane usher
protein precursor - Yersinia enterocolitica serotype O:8
/ biotype 1B (strain 8081)
Length = 891
Score = 74.9 bits (176), Expect = 3e-12
Identities = 32/69 (46%), Positives = 50/69 (72%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++T+ Q G TIY+T V+PGAFE++D+ + S GDL + + E+DG S +PFS
Sbjct: 320 VAETNARVTVTQRGQTIYETVVTPGAFELADIGTMSYGGDLEMTVTESDGRTRSQRIPFS 379
Query: 222 SVPLLQRQG 248
+ P+L QG
Sbjct: 380 APPMLLYQG 388
>UniRef50_A0IM58 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=2; Enterobacteriaceae|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Serratia proteamaculans 568
Length = 836
Score = 74.9 bits (176), Expect = 3e-12
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA + + Q+G IYQ V PGAF + + T S GDLLV +KEADGS S++VPFS
Sbjct: 272 VAQTNALVKVMQSGNVIYQENVPPGAFSLDSIQPTGSGGDLLVIVKEADGSEQSFTVPFS 331
Query: 222 SVPLLQRQG 248
+VP + + G
Sbjct: 332 AVPNMLKPG 340
>UniRef50_Q8ENN1 Cluster: Dipeptide ABC transporter permease; n=3;
Bacillaceae|Rep: Dipeptide ABC transporter permease -
Oceanobacillus iheyensis
Length = 333
Score = 74.5 bits (175), Expect = 4e-12
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA+IPV+T GLQ G LLGG+I+ E +F+WPG+GR + +++ RDYPVIQ+ IL+
Sbjct: 251 ALKNAIIPVITVIGLQTGVLLGGAILTETIFSWPGIGRYVYEAISFRDYPVIQSGILV 308
>UniRef50_Q1LMT0 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=2; Burkholderiaceae|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM
2839)
Length = 929
Score = 74.5 bits (175), Expect = 4e-12
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++ + QNG IYQT V+PG F I DL TS G+L V++ EA+G V +++VPFS
Sbjct: 334 VANTNARVVVSQNGQMIYQTTVAPGPFSIKDLNPTSYQGNLTVQVFEANGEVTTFAVPFS 393
Query: 222 SVPLLQRQG 248
+VP R G
Sbjct: 394 AVPNSLRPG 402
>UniRef50_A7ML89 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 889
Score = 74.1 bits (174), Expect = 5e-12
Identities = 34/75 (45%), Positives = 51/75 (68%)
Frame = +3
Query: 30 DTVDLAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYS 209
D +A++NA++T++Q+G TIY+T V+PG F I+DLY T G+L V + EADGS +
Sbjct: 298 DIRGVARTNARVTVRQSGQTIYETTVAPGEFAINDLYPTGYGGNLDVTVYEADGSEQHFQ 357
Query: 210 VPFSSVPLLQRQGRI 254
VP++SV R G +
Sbjct: 358 VPYASVAQQLRPGAL 372
>UniRef50_A5WGG6 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=2; Moraxellaceae|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Psychrobacter sp. PRwf-1
Length = 851
Score = 74.1 bits (174), Expect = 5e-12
Identities = 34/68 (50%), Positives = 47/68 (69%)
Frame = +3
Query: 45 AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSS 224
AK+NA++ ++Q G IYQT VS G+FEI+DLY T G L V + EADG V +S+P++S
Sbjct: 303 AKTNAKVEVRQQGQLIYQTNVSAGSFEINDLYPTGFGGQLDVSVIEADGEVQKFSLPYTS 362
Query: 225 VPLLQRQG 248
V + R G
Sbjct: 363 VAQMLRPG 370
>UniRef50_P46000 Cluster: Outer membrane usher protein fasD
precursor; n=5; Escherichia coli|Rep: Outer membrane
usher protein fasD precursor - Escherichia coli
Length = 835
Score = 74.1 bits (174), Expect = 5e-12
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A S A +TIKQ G I Q V PG FEI+D + SGDL V IKEADGS +S+ PFS
Sbjct: 281 IASSQAVVTIKQGGVVILQKNVPPGPFEINDFSLSGYSGDLYVNIKEADGSEHSFIQPFS 340
Query: 222 SVPLLQRQG 248
++P ++R+G
Sbjct: 341 TLPEMKREG 349
>UniRef50_UPI00005F8BE3 Cluster: COG3188: P pilus assembly protein,
porin PapC; n=1; Yersinia frederiksenii ATCC 33641|Rep:
COG3188: P pilus assembly protein, porin PapC - Yersinia
frederiksenii ATCC 33641
Length = 868
Score = 73.7 bits (173), Expect = 6e-12
Identities = 32/69 (46%), Positives = 48/69 (69%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++T++Q I++T V PG F I DL+ST SGDLLV + EADG +++V ++
Sbjct: 297 IANSNAKVTVRQGSNVIHETSVPPGPFAIDDLHSTGYSGDLLVTVTEADGQARTFTVAYA 356
Query: 222 SVPLLQRQG 248
+VP + R G
Sbjct: 357 AVPQMLRPG 365
>UniRef50_Q13FX3 Cluster: Putative fimbrial biogenesis outer
membrane usher protein; n=1; Burkholderia xenovorans
LB400|Rep: Putative fimbrial biogenesis outer membrane
usher protein - Burkholderia xenovorans (strain LB400)
Length = 866
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++TI+QNGY +Y T V G F I DLY T GDL V I EADG V ++ VP++
Sbjct: 288 VAETNARVTIRQNGYVLYDTAVPAGPFVIDDLYPTGYGGDLDVSIIEADGRVRTFRVPYA 347
Query: 222 SVPLLQRQG 248
SV R G
Sbjct: 348 SVAQALRPG 356
>UniRef50_A7NQN2 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Roseiflexus
castenholzii DSM 13941|Rep: Binding-protein-dependent
transport systems inner membrane component - Roseiflexus
castenholzii DSM 13941
Length = 316
Score = 73.7 bits (173), Expect = 6e-12
Identities = 33/70 (47%), Positives = 49/70 (70%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R+ A NA IPV+T G+QFG L+GGSI++E++F+ PG+ LL++ + RD
Sbjct: 221 KGLRDRAVLLRHALQNAFIPVLTVIGVQFGVLMGGSIIIEQIFSLPGIAFLLINGIYNRD 280
Query: 536 YPVIQAEILL 507
YPV+Q+ +LL
Sbjct: 281 YPVVQSTVLL 290
Score = 37.9 bits (84), Expect = 0.38
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = -2
Query: 504 SLEFILINLVVDVLYAAINPAIRY 433
SL F+L+NL VD+LY+A++P IRY
Sbjct: 292 SLIFVLVNLAVDLLYSAVDPRIRY 315
>UniRef50_Q89FI7 Cluster: Bll6713 protein; n=5;
Alphaproteobacteria|Rep: Bll6713 protein -
Bradyrhizobium japonicum
Length = 316
Score = 73.3 bits (172), Expect = 8e-12
Identities = 30/56 (53%), Positives = 42/56 (75%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA++P++T GLQF LLGG++V E VF WPG+GRL +DS+ RDYPV+ ++ S
Sbjct: 236 NALLPMITVAGLQFPTLLGGALVAETVFTWPGMGRLFLDSIGYRDYPVVMGILMFS 291
>UniRef50_Q7N944 Cluster: Similar to outer membrane usher protein;
n=2; Enterobacteriaceae|Rep: Similar to outer membrane
usher protein - Photorhabdus luminescens subsp.
laumondii
Length = 824
Score = 73.3 bits (172), Expect = 8e-12
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA + I QN IYQ V PG F I + T S DLLV + EADG NS++VPFS
Sbjct: 278 VAQTNALVKITQNNVVIYQGNVPPGPFAIDTILPTGSGSDLLVAVTEADGRTNSFTVPFS 337
Query: 222 SVPLLQRQG 248
SVP + ++G
Sbjct: 338 SVPNMMKEG 346
>UniRef50_Q67QF0 Cluster: Oligopeptide ABC transporter permease
protein; n=2; Firmicutes|Rep: Oligopeptide ABC
transporter permease protein - Symbiobacterium
thermophilum
Length = 336
Score = 73.3 bits (172), Expect = 8e-12
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IP VT GLQ G LLGG+++VE VF WPGLGRL+V ++ RDY ++Q ++L
Sbjct: 257 NALIPTVTVTGLQLGVLLGGNMIVETVFGWPGLGRLVVGAIFARDYALVQGAVML 311
>UniRef50_Q93IN8 Cluster: Salmonella atypical fimbria outer membrane
usher; n=7; Gammaproteobacteria|Rep: Salmonella atypical
fimbria outer membrane usher - Salmonella typhimurium
Length = 836
Score = 73.3 bits (172), Expect = 8e-12
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++ A++ +KQNGYTIY T V+PG F + DL T SSGDL V + EADGS + VP+
Sbjct: 280 IARTQARVEVKQNGYTIYNTTVAPGPFALRDLSVTDSSGDLHVTVWEADGSTQMFVVPYQ 339
Query: 222 SVPLLQRQG 248
+ + QG
Sbjct: 340 TPAIALHQG 348
Score = 35.9 bits (79), Expect = 1.5
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +2
Query: 227 AITPASGANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWG-TTWSGLTS 376
AI G +Y++ +YR++ + + + AQATL +G PW T + G+ S
Sbjct: 342 AIALHQGYLKYSLLAGRYRSSDSATDKRQIAQATLMYGLPWNLTAYGGIQS 392
>UniRef50_Q7P899 Cluster: Dipeptide transport system permease
protein dppB; n=4; Bacteria|Rep: Dipeptide transport
system permease protein dppB - Fusobacterium nucleatum
subsp. vincentii ATCC 49256
Length = 308
Score = 73.3 bits (172), Expect = 8e-12
Identities = 29/57 (50%), Positives = 44/57 (77%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NA+IP++T GLQFG LLGG+++ E VF+WPG+GRL+VD++ +D P + A ++
Sbjct: 223 ALKNALIPIITVVGLQFGGLLGGAVLTESVFSWPGVGRLMVDAIRQKDTPTVLASVV 279
>UniRef50_Q13L13 Cluster: Putative outer membrane fimbrial usher
porin; n=1; Burkholderia xenovorans LB400|Rep: Putative
outer membrane fimbrial usher porin - Burkholderia
xenovorans (strain LB400)
Length = 725
Score = 73.3 bits (172), Expect = 8e-12
Identities = 34/68 (50%), Positives = 50/68 (73%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA +T+ QNG +Y+ V+PG FEI+D+ +T G+LLV + EADGS +S++VP++
Sbjct: 213 VAMSNALVTVTQNGNLLYEATVAPGPFEINDVAATGYGGNLLVTVTEADGSRHSFTVPYT 272
Query: 222 SVPLLQRQ 245
SV L RQ
Sbjct: 273 SVVPLLRQ 280
>UniRef50_A6TPQ0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Alkaliphilus metalliredigens QYMF|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Alkaliphilus
metalliredigens QYMF
Length = 318
Score = 73.3 bits (172), Expect = 8e-12
Identities = 29/69 (42%), Positives = 47/69 (68%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
+G + L N ++PV+T GL G LLGG+ ++E +F+WPG+GR+ +D++ +RD
Sbjct: 215 RGVKELDIILKNVLPNCVLPVITLLGLSIGGLLGGTAIIESIFSWPGVGRMAIDAITVRD 274
Query: 536 YPVIQAEIL 510
YPVIQA ++
Sbjct: 275 YPVIQAYVI 283
>UniRef50_A3IAE9 Cluster: Nickel transport system; n=1; Bacillus sp.
B14905|Rep: Nickel transport system - Bacillus sp.
B14905
Length = 289
Score = 73.3 bits (172), Expect = 8e-12
Identities = 30/55 (54%), Positives = 43/55 (78%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA IP+ T G+ G LLGG+++VE+VF+WPGLGR L++S+ RDYPV+Q +L+
Sbjct: 205 NAAIPISTLFGMTLGNLLGGAVIVEQVFSWPGLGRYLIESITNRDYPVVQCYVLV 259
>UniRef50_P33129 Cluster: Outer membrane usher protein htrE
precursor; n=20; Enterobacteriaceae|Rep: Outer membrane
usher protein htrE precursor - Escherichia coli (strain
K12)
Length = 865
Score = 73.3 bits (172), Expect = 8e-12
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++TI Q GY IY+T V PGAF I DL + DL+V I+E+DGS ++S PFS
Sbjct: 290 VANTNAKVTITQGGYKIYETTVPPGAFVIDDLSPSGYGSDLIVTIEESDGSKRTFSQPFS 349
Query: 222 SVPLLQRQG 248
SV + R G
Sbjct: 350 SVVQMLRPG 358
>UniRef50_Q89KL0 Cluster: ABC transporter permease protein; n=5;
Rhizobiales|Rep: ABC transporter permease protein -
Bradyrhizobium japonicum
Length = 307
Score = 72.9 bits (171), Expect = 1e-11
Identities = 31/55 (56%), Positives = 43/55 (78%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++ ++T GLQFG L+G ++VVEK+F+WPG+G LLVDSV RD P +Q IL+
Sbjct: 227 NALVLILTTMGLQFGALMGQAVVVEKLFSWPGIGSLLVDSVLQRDIPAVQGSILV 281
Score = 33.5 bits (73), Expect = 8.3
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -2
Query: 534 PGDSGGNSAFSLEFILINLVVDVLYAAINPAIRY 433
P G L F+ INL++D+LY I+P IRY
Sbjct: 273 PAVQGSILVVVLFFLAINLLIDLLYGVIDPRIRY 306
>UniRef50_Q28KP0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=3;
Alphaproteobacteria|Rep: Binding-protein-dependent
transport systems inner membrane component - Jannaschia
sp. (strain CCS1)
Length = 321
Score = 72.9 bits (171), Expect = 1e-11
Identities = 30/65 (46%), Positives = 49/65 (75%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSR 501
A NA+IPV+T G++FG+LLGG+++VE++F PGLGR+++D++ RDY ++Q IL
Sbjct: 234 ALPNALIPVLTLSGVEFGYLLGGAVIVEQIFALPGLGRVVLDAIGERDYALVQGVILFIA 293
Query: 500 WNLFL 486
+N +
Sbjct: 294 FNFMV 298
Score = 33.5 bits (73), Expect = 8.3
Identities = 12/24 (50%), Positives = 20/24 (83%)
Frame = -2
Query: 504 SLEFILINLVVDVLYAAINPAIRY 433
+ F+++NL+VD+ YAA++P IRY
Sbjct: 293 AFNFMVVNLLVDLAYAALDPRIRY 316
>UniRef50_A6TPC4 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Alkaliphilus metalliredigens QYMF|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Alkaliphilus
metalliredigens QYMF
Length = 315
Score = 72.9 bits (171), Expect = 1e-11
Identities = 29/57 (50%), Positives = 44/57 (77%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NA+IP++T GLQFG LLGG++ E VF++PG+GRL+V+S+ RD P++Q ++
Sbjct: 230 ALSNALIPIITVTGLQFGVLLGGAVFTETVFSFPGIGRLIVESIRARDLPMVQGSVI 286
>UniRef50_A1UIJ0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=11;
Bacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Mycobacterium sp. (strain KMS)
Length = 322
Score = 72.9 bits (171), Expect = 1e-11
Identities = 33/55 (60%), Positives = 42/55 (76%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IPV+T G+Q +LGG IVVE VF WPGLGRL+ ++V RDYP+IQ +LL
Sbjct: 242 NALIPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVYNAVAARDYPLIQGAVLL 296
>UniRef50_A7D4N6 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Binding-protein-dependent
transport systems inner membrane component - Halorubrum
lacusprofundi ATCC 49239
Length = 339
Score = 72.9 bits (171), Expect = 1e-11
Identities = 28/58 (48%), Positives = 45/58 (77%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A N +IP+VT GLQ G L+GG+++ E VF+WPGLG L++D++ +RD+P+IQ +++
Sbjct: 257 ALQNTLIPIVTVLGLQLGTLIGGAVITEAVFSWPGLGTLVIDAINVRDWPLIQGSLIV 314
>UniRef50_Q9I1Y5 Cluster: Usher CupA3; n=7; Pseudomonas
aeruginosa|Rep: Usher CupA3 - Pseudomonas aeruginosa
Length = 872
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +3
Query: 45 AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSS 224
A + A++ I QNG I + V+PG F I DLY ++ +GDL V++ EADGSV+S+SVPF+S
Sbjct: 292 AATAARVVISQNGRKIREVNVAPGPFVIDDLYDSAYAGDLDVQVFEADGSVSSFSVPFAS 351
Query: 225 VPLLQRQG 248
VP R G
Sbjct: 352 VPESMRPG 359
>UniRef50_Q8FWN8 Cluster: Peptide ABC transporter, permease protein;
n=5; Rhizobiales|Rep: Peptide ABC transporter, permease
protein - Brucella suis
Length = 319
Score = 72.5 bits (170), Expect = 1e-11
Identities = 34/70 (48%), Positives = 43/70 (61%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R NAM+PVVT G G +GG+I +E VFNWPG+G LL+++VE RD
Sbjct: 224 KGVREFWVVVKHTLRNAMLPVVTLIGSTIGLAVGGAIFIESVFNWPGMGLLLINAVETRD 283
Query: 536 YPVIQAEILL 507
YPVI L+
Sbjct: 284 YPVIMGATLV 293
>UniRef50_Q7WJY0 Cluster: ABC transport protein inner membrane
component; n=3; Bordetella|Rep: ABC transport protein
inner membrane component - Bordetella bronchiseptica
(Alcaligenes bronchisepticus)
Length = 319
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A NA+IP VT L FG L+GG +VVE VF++PGLGRLL+ +VE +D
Sbjct: 219 KGLRERTVLYRHALRNALIPTVTVLALDFGILMGGIVVVETVFSYPGLGRLLIFAVEQKD 278
Query: 536 YPVIQAEIL 510
PV+QA +L
Sbjct: 279 LPVLQAGVL 287
>UniRef50_P33408 Cluster: Outer membrane usher protein myfC
precursor; n=10; Yersinia|Rep: Outer membrane usher
protein myfC precursor - Yersinia enterocolitica
Length = 841
Score = 72.5 bits (170), Expect = 1e-11
Identities = 29/71 (40%), Positives = 51/71 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+S A++ ++QNGY +Y T VSPG FE++D+ + S+GDL V + E++G+ ++VP+S
Sbjct: 292 IARSQARVEVRQNGYLLYSTVVSPGPFELTDILPSHSNGDLHVTVLESNGTTQQFTVPYS 351
Query: 222 SVPLLQRQGRI 254
+ R+GR+
Sbjct: 352 VPAIRLRKGRL 362
>UniRef50_Q930N4 Cluster: ABC transporter, permease; n=1;
Sinorhizobium meliloti|Rep: ABC transporter, permease -
Rhizobium meliloti (Sinorhizobium meliloti)
Length = 317
Score = 72.1 bits (169), Expect = 2e-11
Identities = 30/71 (42%), Positives = 49/71 (69%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A NA++P + L FGFL+GG ++VE+VF++PG G LL+D++++RD
Sbjct: 221 KGLRPTAVLFRHALPNAIVPALNVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRD 280
Query: 536 YPVIQAEILLS 504
P+I+A +++S
Sbjct: 281 IPLIKATVMIS 291
>UniRef50_Q48MA4 Cluster: Outer membrane usher protein fimD; n=2;
Pseudomonas syringae group|Rep: Outer membrane usher
protein fimD - Pseudomonas syringae pv. phaseolicola
(strain 1448A / Race 6)
Length = 851
Score = 72.1 bits (169), Expect = 2e-11
Identities = 29/71 (40%), Positives = 51/71 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA + ++QNG+ +Y VSPG FEI+D+Y + S+GDL V + EADG V +++ ++
Sbjct: 306 IAETNATVEVRQNGFLLYSGSVSPGPFEIADIYPSGSNGDLSVSVIEADGRVRTFTQAYA 365
Query: 222 SVPLLQRQGRI 254
S+P++ G +
Sbjct: 366 SLPIMVPWGSL 376
>UniRef50_A1SP55 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Nocardioides sp. JS614|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Nocardioides sp. (strain BAA-499 / JS614)
Length = 321
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/48 (70%), Positives = 40/48 (83%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPV 528
NA++PVVT G+Q GFLLGGS+VVE VF PGLGRLLV+S +RDYPV
Sbjct: 235 NALLPVVTVLGVQAGFLLGGSVVVETVFGIPGLGRLLVESFTIRDYPV 282
>UniRef50_P21647 Cluster: Outer membrane usher protein mrkC
precursor; n=3; Enterobacteriaceae|Rep: Outer membrane
usher protein mrkC precursor - Klebsiella pneumoniae
Length = 828
Score = 72.1 bits (169), Expect = 2e-11
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +3
Query: 39 DLAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPF 218
D+A+SNA T++Q IYQT V PG F + D+Y + DL V +KE DGSV +SVP+
Sbjct: 289 DVAQSNALATVRQGSNIIYQTTVPPGPFTLQDVYPSGYGSDLEVSVKEGDGSVEVFSVPY 348
Query: 219 SSVPLLQRQG 248
+SV L R G
Sbjct: 349 ASVAQLLRPG 358
>UniRef50_Q8ELZ5 Cluster: Oligopeptide ABC transporter permease;
n=5; Firmicutes|Rep: Oligopeptide ABC transporter
permease - Oceanobacillus iheyensis
Length = 318
Score = 71.3 bits (167), Expect = 3e-11
Identities = 34/70 (48%), Positives = 47/70 (67%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A NA+IPVVT GLQFG LLGG+++ E VF G+G+L++DS+ RD
Sbjct: 223 KGVKETIVIYRHALKNALIPVVTVVGLQFGSLLGGAVLAESVFAINGMGKLIIDSITARD 282
Query: 536 YPVIQAEILL 507
+PV+Q IL+
Sbjct: 283 FPVVQGTILV 292
>UniRef50_Q1ARP2 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Rubrobacter
xylanophilus DSM 9941|Rep: Binding-protein-dependent
transport systems inner membrane component - Rubrobacter
xylanophilus (strain DSM 9941 / NBRC 16129)
Length = 334
Score = 71.3 bits (167), Expect = 3e-11
Identities = 30/55 (54%), Positives = 44/55 (80%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA +P+VT GLQFG LLGG++V E VF++PG+GR++V+++ RDYPV+Q L+
Sbjct: 254 NAALPIVTIVGLQFGALLGGAVVSEAVFSYPGVGRMMVNAIFQRDYPVVQGAALV 308
>UniRef50_A4TLG2 Cluster: Outer membrane usher protein precursor;
n=11; Yersinia|Rep: Outer membrane usher protein
precursor - Yersinia pestis (strain Pestoides F)
Length = 870
Score = 71.3 bits (167), Expect = 3e-11
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++ ++Q G IY+T V PG F I DLY T G+L V I EADGS ++ VPF+
Sbjct: 296 VARTNARVVVRQQGRPIYETTVPPGPFVIDDLYPTGQGGNLNVTITEADGSEQTFIVPFA 355
Query: 222 SVPLLQRQG 248
S+ L R G
Sbjct: 356 SIAELLRPG 364
>UniRef50_A0R7D2 Cluster: Dipeptide transport system permease
protein DppB; n=4; Bacteria|Rep: Dipeptide transport
system permease protein DppB - Mycobacterium smegmatis
(strain ATCC 700084 / mc(2)155)
Length = 332
Score = 70.9 bits (166), Expect = 4e-11
Identities = 29/54 (53%), Positives = 43/54 (79%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA +PVVT GL+FG LLGG+I+ E+VF+WPG+GRL V+++ RD+ ++Q +L
Sbjct: 251 NASLPVVTVVGLEFGSLLGGAILTEQVFSWPGIGRLTVEAISNRDFALVQGAVL 304
>UniRef50_Q98AA8 Cluster: ABC transporter, permease; n=1;
Mesorhizobium loti|Rep: ABC transporter, permease -
Rhizobium loti (Mesorhizobium loti)
Length = 329
Score = 70.5 bits (165), Expect = 6e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = -3
Query: 734 MVPRGXKGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVD 555
MV KG N A+ NAM+PVVT L G+++ G+I VE VF WPG+G L V+
Sbjct: 229 MVTARAKGLTNGQMLMRHAFRNAMLPVVTLIALNLGYVVAGAITVEAVFAWPGIGGLTVE 288
Query: 554 SVEMRDYPVIQAEILL 507
++ RDYP++Q LL
Sbjct: 289 ALNARDYPILQGIFLL 304
>UniRef50_Q5PFZ4 Cluster: Outer membrane fimbrial usher protein;
n=6; Enterobacteriaceae|Rep: Outer membrane fimbrial
usher protein - Salmonella paratyphi-a
Length = 853
Score = 70.5 bits (165), Expect = 6e-11
Identities = 34/69 (49%), Positives = 45/69 (65%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A S+A + +KQ G IY+T V PG F I DLY+T GDL VE+ EA G + ++VP+S
Sbjct: 281 VAASSAHVVVKQLGKVIYETNVPPGPFYIDDLYNTRYQGDLEVEVIEASGKTSRFTVPYS 340
Query: 222 SVPLLQRQG 248
SVP R G
Sbjct: 341 SVPDSVRPG 349
>UniRef50_Q11M95 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Alphaproteobacteria|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Mesorhizobium sp. (strain BNC1)
Length = 316
Score = 70.5 bits (165), Expect = 6e-11
Identities = 33/55 (60%), Positives = 41/55 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+ PVVT GLQ G LLG +++VE VFNWPGL LV +VE RDYP ++A IL+
Sbjct: 237 NALGPVVTVIGLQLGILLGSTVLVEFVFNWPGLSGYLVTAVEQRDYPTVRAIILV 291
>UniRef50_A3Y4Z9 Cluster: Oligopeptide ABC transporter, permease
protein; n=1; Marinomonas sp. MED121|Rep: Oligopeptide
ABC transporter, permease protein - Marinomonas sp.
MED121
Length = 313
Score = 70.5 bits (165), Expect = 6e-11
Identities = 31/63 (49%), Positives = 43/63 (68%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
NA IPV+T G G L+GGSIV E +F+WPG+GRLL+ SV RD V+Q I++ + +
Sbjct: 226 NAAIPVITIVGFMIGTLIGGSIVTETIFSWPGVGRLLISSVTARDLAVVQTGIMMVAFTM 285
Query: 491 FLS 483
L+
Sbjct: 286 ILA 288
>UniRef50_Q8GFC9 Cluster: PhfD; n=3; Photorhabdus luminescens|Rep:
PhfD - Photorhabdus luminescens (Xenorhabdus
luminescens)
Length = 835
Score = 70.1 bits (164), Expect = 8e-11
Identities = 29/71 (40%), Positives = 51/71 (71%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A ++A++ + Q IYQT+V PGAFEI+D+Y ++ +GDL + I E +G+V ++ PF+
Sbjct: 273 IAMTHARVEVHQKDNIIYQTFVPPGAFEITDIYPSNLNGDLEISIYEENGNVRKFTQPFA 332
Query: 222 SVPLLQRQGRI 254
+ PL+ R G++
Sbjct: 333 ASPLMIRSGQM 343
>UniRef50_Q2CJD0 Cluster: Putative dipeptide transport system
permease protein 1; n=1; Oceanicola granulosus
HTCC2516|Rep: Putative dipeptide transport system
permease protein 1 - Oceanicola granulosus HTCC2516
Length = 321
Score = 70.1 bits (164), Expect = 8e-11
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 5/80 (6%)
Frame = -3
Query: 707 RNLGCPQTR-----AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEM 543
R +G P+ R A NAM+P+VT GL+ G LL G+++ E VF+WPGLGRL+ +++
Sbjct: 225 RAIGFPERRVMTRFALRNAMLPIVTVLGLELGLLLSGAVLTETVFSWPGLGRLIYEAILS 284
Query: 542 RDYPVIQAEILLSRWNLFLS 483
RD PVI L+ + + L+
Sbjct: 285 RDTPVIMGAFLIMSFTVMLA 304
>UniRef50_Q2CEF5 Cluster: Peptide ABC transporter, permease protein;
n=2; Bacteria|Rep: Peptide ABC transporter, permease
protein - Oceanicola granulosus HTCC2516
Length = 306
Score = 70.1 bits (164), Expect = 8e-11
Identities = 33/58 (56%), Positives = 43/58 (74%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A+ NA IP+VT GLQ G LL G+++ E VF +PG+GRLLV S+ RD+PV+Q ILL
Sbjct: 223 AFRNASIPIVTITGLQLGSLLSGAVLTETVFAYPGIGRLLVRSIFERDFPVVQGLILL 280
>UniRef50_Q213C0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2; Rhodopseudomonas
palustris|Rep: Binding-protein-dependent transport
systems inner membrane component - Rhodopseudomonas
palustris (strain BisB18)
Length = 322
Score = 70.1 bits (164), Expect = 8e-11
Identities = 29/55 (52%), Positives = 43/55 (78%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++P+VT GLQ G +LGGS+V+E VF+WPG+G LL DSV R++P++ ++L
Sbjct: 242 NALLPIVTLLGLQLGTILGGSVVIEAVFSWPGIGSLLFDSVMSRNFPMVLGVLVL 296
>UniRef50_A4W4Z4 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=1; Enterobacter sp. 638|Rep:
Fimbrial biogenesis outer membrane usher protein
precursor - Enterobacter sp. 638
Length = 818
Score = 70.1 bits (164), Expect = 8e-11
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNA++T+++NG IYQ V G F I+DL S S+ G L V I EADGS +V +S
Sbjct: 276 IAKSNARVTVRENGNVIYQRSVPAGPFVITDLSSVSNGGKLDVTITEADGSETHSTVSYS 335
Query: 222 SVPLLQRQGRI 254
+VP L R G++
Sbjct: 336 NVPQLLRAGQL 346
>UniRef50_A0JTR1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Actinomycetales|Rep: Binding-protein-dependent transport
systems inner membrane component - Arthrobacter sp.
(strain FB24)
Length = 311
Score = 70.1 bits (164), Expect = 8e-11
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
+G RN A N+ IPV T G +F +L G +VVE VF WPG+G L+V ++E RD
Sbjct: 211 RGVRNSVLTWRYAMANSAIPVFTALGTRFAAMLNGVVVVEVVFAWPGVGSLIVRALETRD 270
Query: 536 YPVIQAEILLS 504
YP+IQA +LL+
Sbjct: 271 YPLIQATVLLT 281
>UniRef50_A5W6W9 Cluster: Fimbrial biogenesis outer membrane usher
protein; n=3; Pseudomonas|Rep: Fimbrial biogenesis outer
membrane usher protein - Pseudomonas putida F1
Length = 851
Score = 69.7 bits (163), Expect = 1e-10
Identities = 33/71 (46%), Positives = 48/71 (67%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+++A++ I+QN Y +Y V PG FEISD+Y + S+GDL V I EADG FS
Sbjct: 306 VAQTSARVEIRQNNYVLYTANVPPGPFEISDIYPSGSNGDLEVTIIEADGRRRVTVQAFS 365
Query: 222 SVPLLQRQGRI 254
S+PL+ R G++
Sbjct: 366 SLPLMVRGGQV 376
>UniRef50_Q5WKK0 Cluster: Oligopeptide ABC transporter permease;
n=3; Firmicutes|Rep: Oligopeptide ABC transporter
permease - Bacillus clausii (strain KSM-K16)
Length = 321
Score = 69.3 bits (162), Expect = 1e-10
Identities = 26/69 (37%), Positives = 46/69 (66%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A+ NA+ P++T G+Q LLGG+++ E ++ WPG+GR++VD+++ RD
Sbjct: 219 KGLKEFWVISKHAFKNALTPLLTVTGMQVSMLLGGAVLTETIYAWPGMGRMIVDAIDKRD 278
Query: 536 YPVIQAEIL 510
+ V+Q +L
Sbjct: 279 FIVVQGSVL 287
>UniRef50_Q0HI10 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=1; Shewanella sp. MR-4|Rep:
Fimbrial biogenesis outer membrane usher protein
precursor - Shewanella sp. (strain MR-4)
Length = 819
Score = 69.3 bits (162), Expect = 1e-10
Identities = 34/67 (50%), Positives = 46/67 (68%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AK+NA + ++QNG IY+T VSPG F I+DLY T G+L V I EADG+ +SVP+
Sbjct: 276 VAKTNAIVKVEQNGRIIYETLVSPGEFLINDLYPTGYGGNLNVIILEADGTEQRFSVPYE 335
Query: 222 SVPLLQR 242
S+ L R
Sbjct: 336 SMAQLLR 342
>UniRef50_Q9HWU4 Cluster: Usher CupB3; n=9; Proteobacteria|Rep:
Usher CupB3 - Pseudomonas aeruginosa
Length = 844
Score = 68.9 bits (161), Expect = 2e-10
Identities = 31/68 (45%), Positives = 45/68 (66%)
Frame = +3
Query: 45 AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSS 224
A +NA++++ Q GY IY+T V+PGAF + +L + S GDL V + EA G V S+ VPF++
Sbjct: 279 ASTNARVSVYQRGYLIYETTVAPGAFALDELQTASYGGDLEVRVTEASGEVRSFIVPFAT 338
Query: 225 VPLLQRQG 248
L R G
Sbjct: 339 TVQLLRPG 346
>UniRef50_Q4KGP2 Cluster: Outer membrane usher protein; n=1;
Pseudomonas fluorescens Pf-5|Rep: Outer membrane usher
protein - Pseudomonas fluorescens (strain Pf-5 / ATCC
BAA-477)
Length = 896
Score = 68.9 bits (161), Expect = 2e-10
Identities = 31/68 (45%), Positives = 46/68 (67%)
Frame = +3
Query: 45 AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSS 224
A +NA++++ Q GY IY+T V+PG FEISDL + S GDL V + EA+G + ++VPF++
Sbjct: 327 ASTNAKVSVYQRGYMIYETSVAPGPFEISDLQAASFGGDLDVTVTEANGQTSRFTVPFAT 386
Query: 225 VPLLQRQG 248
R G
Sbjct: 387 TVQTLRPG 394
>UniRef50_Q8TRD3 Cluster: Oligopeptide ABC transporter, permease;
n=5; Methanomicrobia|Rep: Oligopeptide ABC transporter,
permease - Methanosarcina acetivorans
Length = 316
Score = 68.9 bits (161), Expect = 2e-10
Identities = 29/57 (50%), Positives = 40/57 (70%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NA++PV+T GL GFLL GS+VVE +F W G+G L+VDS+ DY ++Q +L
Sbjct: 230 ALKNALVPVITVVGLSIGFLLNGSVVVETIFGWAGIGNLVVDSILSHDYMMVQGTVL 286
>UniRef50_Q0VTH0 Cluster: Type 1 pili subunit FimD; n=1; Alcanivorax
borkumensis SK2|Rep: Type 1 pili subunit FimD -
Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM
11573)
Length = 820
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/69 (47%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A+SNA+++I QN YTIY+ +V PG F I D+ S S+GDL V I E DGS + P++
Sbjct: 282 IAQSNARVSITQNSYTIYEQFVPPGEFAIDDIPSL-SNGDLTVTITEEDGSQKRFVQPYT 340
Query: 222 SVPLLQRQG 248
+P L R G
Sbjct: 341 QIPNLVRPG 349
>UniRef50_A6CZZ2 Cluster: Putative outer membrane protein; n=1;
Vibrio shilonii AK1|Rep: Putative outer membrane protein
- Vibrio shilonii AK1
Length = 806
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/73 (41%), Positives = 48/73 (65%)
Frame = +3
Query: 39 DLAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPF 218
D+A S+A++T+ QNG +Y V PG FEI DL +S+ DL + I+E++G + ++PF
Sbjct: 262 DVALSSAKVTVLQNGLVLYSRVVPPGEFEIDDLDVSSTGADLELVIEESNGQIRRRTIPF 321
Query: 219 SSVPLLQRQGRIN 257
+ +P L R+G N
Sbjct: 322 TKLPSLLREGSFN 334
>UniRef50_A3IB67 Cluster: Dipeptide transport system permease
protein dppB; n=1; Bacillus sp. B14905|Rep: Dipeptide
transport system permease protein dppB - Bacillus sp.
B14905
Length = 294
Score = 68.5 bits (160), Expect = 2e-10
Identities = 33/67 (49%), Positives = 45/67 (67%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSR 501
A NAMIPV+T GLQFGFLL G++V+E VF PGLG ++++ RD P +Q +L
Sbjct: 212 ALQNAMIPVITLIGLQFGFLLAGAVVIETVFALPGLGSFSIEAITKRDLPTVQGLVLFMA 271
Query: 500 WNLFLST 480
+ LF+ T
Sbjct: 272 F-LFIIT 277
>UniRef50_Q9V2D1 Cluster: Binding protein-dependent transport
system, inner membrane component; n=1; Pyrococcus
abyssi|Rep: Binding protein-dependent transport system,
inner membrane component - Pyrococcus abyssi
Length = 310
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IP+VT LQ +L GG++V E VF WPG+G LLV ++ RDYPV+QA +L+
Sbjct: 227 NALIPLVTYMFLQIPWLFGGAVVTETVFGWPGMGNLLVMAIFQRDYPVVQAIVLI 281
>UniRef50_Q65LC9 Cluster: AppB; n=1; Bacillus licheniformis ATCC
14580|Rep: AppB - Bacillus licheniformis (strain DSM 13
/ ATCC 14580)
Length = 316
Score = 68.1 bits (159), Expect = 3e-10
Identities = 28/56 (50%), Positives = 40/56 (71%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
N ++PV+T GL +GG++V E++F+WPGLG+L VDS RDYPVI A ++S
Sbjct: 237 NGLLPVITIFGLMIPSFIGGAVVTEQIFSWPGLGKLFVDSAFQRDYPVIMAMTVIS 292
>UniRef50_Q9ADY0 Cluster: DfpB; n=3; Agrobacterium tumefaciens|Rep:
DfpB - Agrobacterium tumefaciens
Length = 324
Score = 68.1 bits (159), Expect = 3e-10
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 5/74 (6%)
Frame = -3
Query: 716 KGXRNLGCPQTR-----AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDS 552
+ R G P+ R + NA IP VT GLQ G L+GG+++VE +FNWPGL LLV +
Sbjct: 222 RALRAKGMPERRIIWQHVFRNAAIPNVTIIGLQLGNLMGGTVLVEAMFNWPGLSTLLVGA 281
Query: 551 VEMRDYPVIQAEIL 510
V R+YP++Q +L
Sbjct: 282 VSARNYPLVQGSML 295
Score = 34.3 bits (75), Expect = 4.7
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -2
Query: 522 GGNSAFSLEFILINLVVDVLYAAINPAIRYK 430
G A + FILINL+V++LY+ ++P IR K
Sbjct: 292 GSMLAIAAAFILINLIVELLYSLLDPRIRRK 322
>UniRef50_Q0FSN8 Cluster: Peptide ABC transporter, permease protein;
n=2; Rhodobacteraceae|Rep: Peptide ABC transporter,
permease protein - Roseovarius sp. HTCC2601
Length = 306
Score = 68.1 bits (159), Expect = 3e-10
Identities = 29/54 (53%), Positives = 42/54 (77%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
+ ++PVV+ GLQF +L+GG+IV+E VF W G+GRL +++V RDYP+IQ IL
Sbjct: 226 SGLVPVVSMLGLQFAYLMGGAIVIENVFAWNGVGRLAIEAVLSRDYPLIQGFIL 279
>UniRef50_A1HFZ5 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=4; Ralstonia pickettii|Rep:
Fimbrial biogenesis outer membrane usher protein
precursor - Ralstonia pickettii 12J
Length = 875
Score = 68.1 bits (159), Expect = 3e-10
Identities = 28/70 (40%), Positives = 49/70 (70%)
Frame = +3
Query: 45 AKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFSS 224
A +NA + ++Q+GY +Y+ V PG F+++D++ + S+GDL + + EADG+ FSS
Sbjct: 324 AATNAVVEVRQSGYVLYRANVPPGPFQLTDIFPSGSNGDLEITVIEADGTRRVTHQAFSS 383
Query: 225 VPLLQRQGRI 254
+PL+ R+GR+
Sbjct: 384 LPLMLRKGRL 393
>UniRef50_Q53191 Cluster: Probable peptide ABC transporter permease
protein y4tP; n=45; Proteobacteria|Rep: Probable peptide
ABC transporter permease protein y4tP - Rhizobium sp.
(strain NGR234)
Length = 313
Score = 68.1 bits (159), Expect = 3e-10
Identities = 27/58 (46%), Positives = 44/58 (75%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA +P++T G+ F +++GG ++ E VFN PG+GRL+VD+++ RDYP+IQ ++L
Sbjct: 231 ALKNAGVPILTVIGISFAYMIGGVVLTETVFNVPGIGRLVVDAIKNRDYPIIQTVLVL 288
>UniRef50_P45096 Cluster: Dipeptide transport system permease
protein dppB; n=164; Bacteria|Rep: Dipeptide transport
system permease protein dppB - Haemophilus influenzae
Length = 333
Score = 68.1 bits (159), Expect = 3e-10
Identities = 26/55 (47%), Positives = 42/55 (76%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IPVVT GL LL G+++ E +F+WPG+G+ ++D+++ RDYPV+Q +L+
Sbjct: 254 NALIPVVTVVGLIVAQLLSGAVLTETIFSWPGIGKWIIDAIQARDYPVLQGSVLI 308
>UniRef50_Q8UAE0 Cluster: ABC transporter, membrane spanning
protein; n=11; Proteobacteria|Rep: ABC transporter,
membrane spanning protein - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 347
Score = 67.7 bits (158), Expect = 4e-10
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA+IP+ T G+ G LLGG++VVE VF+WPGLGRL ++V RD+ V+ +LLS
Sbjct: 266 NALIPITTMAGMHIGGLLGGAVVVETVFSWPGLGRLAFEAVMARDFSVLLGILLLS 321
>UniRef50_Q89VQ3 Cluster: Peptide ABC transporter permease protein;
n=1; Bradyrhizobium japonicum|Rep: Peptide ABC
transporter permease protein - Bradyrhizobium japonicum
Length = 315
Score = 67.7 bits (158), Expect = 4e-10
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A NA++PV+T G++ FL+GG IV E VFN PG+ R LV+++ RD
Sbjct: 219 KGASDAAVNYQHALKNAILPVITVIGIEAAFLIGGLIVTETVFNIPGVARFLVEAIRWRD 278
Query: 536 YPVIQAEILL 507
YP++Q ++L
Sbjct: 279 YPIVQNLVML 288
>UniRef50_Q0K7J5 Cluster: ABC-type transporter, permease component:
PepT family; n=1; Ralstonia eutropha H16|Rep: ABC-type
transporter, permease component: PepT family - Ralstonia
eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 303
Score = 67.7 bits (158), Expect = 4e-10
Identities = 29/56 (51%), Positives = 43/56 (76%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA IP+VT G+ F +LGG+ VVE +F WPG+GR +V++V RD+PV+QA ++L+
Sbjct: 223 NAAIPLVTILGVYFAAMLGGAFVVEVIFAWPGVGRTVVEAVFARDFPVVQAGVMLT 278
>UniRef50_A5TRK7 Cluster: Dipeptide ABC superfamily ATP binding
cassette transporter membrane protein DppB; n=3;
Fusobacterium nucleatum|Rep: Dipeptide ABC superfamily
ATP binding cassette transporter membrane protein DppB -
Fusobacterium nucleatum subsp. polymorphum ATCC 10953
Length = 312
Score = 67.7 bits (158), Expect = 4e-10
Identities = 27/55 (49%), Positives = 42/55 (76%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IP++T GL G LLGG+ V+E ++N+PG+G L + ++ RDYP++QA +LL
Sbjct: 231 NALIPLITLLGLSLGSLLGGTAVIEIIYNFPGMGNLAIKAISFRDYPLVQAYVLL 285
>UniRef50_A4IPU6 Cluster: ABC transporter; n=1; Geobacillus
thermodenitrificans NG80-2|Rep: ABC transporter -
Geobacillus thermodenitrificans (strain NG80-2)
Length = 316
Score = 67.7 bits (158), Expect = 4e-10
Identities = 33/77 (42%), Positives = 48/77 (62%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A NA IP++T G +FG L+ G++V E VFN PG+G+L++ ++E RD
Sbjct: 219 KGVKEKVIVYKHALRNAAIPILTVLGQEFGTLIAGAVVTETVFNLPGIGQLVIHAIEKRD 278
Query: 536 YPVIQAEILLSRWNLFL 486
Y VIQ ILL+ + L
Sbjct: 279 YAVIQGTILLAALSYLL 295
>UniRef50_A3TIW1 Cluster: ABC transporter permease protein; n=1;
Janibacter sp. HTCC2649|Rep: ABC transporter permease
protein - Janibacter sp. HTCC2649
Length = 325
Score = 67.7 bits (158), Expect = 4e-10
Identities = 26/55 (47%), Positives = 44/55 (80%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PV T GLQ G+LLGG++VVE++F+ PG+GR ++ ++ +DY V+Q+ +L+
Sbjct: 245 NALLPVTTMTGLQLGYLLGGAVVVEQIFSLPGIGRQVLLGIQQKDYAVVQSTVLV 299
>UniRef50_Q8YDG7 Cluster: Putative peptide transport system permease
protein BMEII0209; n=7; Proteobacteria|Rep: Putative
peptide transport system permease protein BMEII0209 -
Brucella melitensis
Length = 315
Score = 67.7 bits (158), Expect = 4e-10
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG T A+ NA++ V+T G F L+GGS+V+E++F PGLGRLLV ++ RD
Sbjct: 220 KGVSEYSVLSTHAFRNALVSVLTVSGYIFSLLIGGSVVIEQIFALPGLGRLLVQAILARD 279
Query: 536 YPVIQAEIL 510
PV+Q +L
Sbjct: 280 LPVVQGTML 288
>UniRef50_Q1IKR6 Cluster: ABC peptide transporter, inner membrane
subunit; n=1; Acidobacteria bacterium Ellin345|Rep: ABC
peptide transporter, inner membrane subunit -
Acidobacteria bacterium (strain Ellin345)
Length = 305
Score = 67.3 bits (157), Expect = 5e-10
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA+IPV+T GLQFG LL G+IV E +F+WPG+GRL + ++ RDY +++ IL
Sbjct: 226 NALIPVLTVVGLQFGALLAGAIVTETIFSWPGIGRLTITAINNRDYFLVEGCIL 279
>UniRef50_Q11FQ8 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Mesorhizobium sp.
BNC1|Rep: Binding-protein-dependent transport systems
inner membrane component - Mesorhizobium sp. (strain
BNC1)
Length = 314
Score = 67.3 bits (157), Expect = 5e-10
Identities = 30/66 (45%), Positives = 40/66 (60%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG A NAMIPV+ G++ G +LGG +V+E +FNWPGL L+++ RD
Sbjct: 219 KGVSENASVYRHALPNAMIPVIAVVGIRIGSMLGGMVVIENLFNWPGLSSYLIEACYARD 278
Query: 536 YPVIQA 519
YP IQA
Sbjct: 279 YPAIQA 284
>UniRef50_Q8TKE8 Cluster: Nickel ABC transporter, permease protein;
n=2; Methanosarcina|Rep: Nickel ABC transporter,
permease protein - Methanosarcina acetivorans
Length = 309
Score = 67.3 bits (157), Expect = 5e-10
Identities = 27/57 (47%), Positives = 41/57 (71%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NA +PV+ G+ FG LL GS ++E +F+W GLG L ++SV+++DYPV+Q +L
Sbjct: 226 ALKNATLPVINKLGIGFGSLLAGSAIIESIFSWNGLGNLALESVKLKDYPVVQGYVL 282
>UniRef50_UPI0000E87BBC Cluster: ABC transporter, inner membrane
subunit; n=1; Methylophilales bacterium HTCC2181|Rep:
ABC transporter, inner membrane subunit -
Methylophilales bacterium HTCC2181
Length = 305
Score = 66.9 bits (156), Expect = 7e-10
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = -3
Query: 665 MIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
+IP+++ G+QFG LL G+++ E +F+W G+G LLVDS++ RDYP+ QA I +
Sbjct: 224 LIPIISVLGMQFGSLLSGAVITETIFSWNGIGMLLVDSIQTRDYPITQACIFV 276
>UniRef50_Q2S753 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease components; n=3;
Proteobacteria|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
components - Hahella chejuensis (strain KCTC 2396)
Length = 328
Score = 66.9 bits (156), Expect = 7e-10
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NAM+P +T+ L FGF+LGG+++ E VFN+PGLG+ + ++E RDY IQ ++L
Sbjct: 244 NAMLPQITSLALTFGFVLGGALITEVVFNYPGLGKFTLAAIEKRDYAFIQGQLL 297
>UniRef50_Q8KJ79 Cluster: PUTATIVE ABC TRANSPORTER PERMEASE PROTEIN
OLIGOPEPTIDE; n=1; Mesorhizobium loti|Rep: PUTATIVE ABC
TRANSPORTER PERMEASE PROTEIN OLIGOPEPTIDE - Rhizobium
loti (Mesorhizobium loti)
Length = 303
Score = 66.9 bits (156), Expect = 7e-10
Identities = 29/55 (52%), Positives = 42/55 (76%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PV+T GLQFG L+ G++V E VF WPG GRL++D+V RD+ ++Q IL+
Sbjct: 223 NAILPVLTIMGLQFGGLVAGAVVTESVFAWPGAGRLVIDAVMKRDFALLQFGILV 277
>UniRef50_Q11DM1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Alphaproteobacteria|Rep: Binding-protein-dependent
transport systems inner membrane component -
Mesorhizobium sp. (strain BNC1)
Length = 326
Score = 66.9 bits (156), Expect = 7e-10
Identities = 26/54 (48%), Positives = 41/54 (75%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA++PV++ GL+FG LLGG+++ E +F WPGLG+L + ++ RD P+IQ +L
Sbjct: 246 NALLPVLSVIGLRFGMLLGGAVLTESIFAWPGLGQLTITAISQRDLPLIQGIVL 299
Score = 35.9 bits (79), Expect = 1.5
Identities = 14/24 (58%), Positives = 21/24 (87%)
Frame = -2
Query: 507 FSLEFILINLVVDVLYAAINPAIR 436
F+L F L+NL+VD+LYAA++P +R
Sbjct: 301 FALIFALVNLLVDLLYAAVDPRVR 324
>UniRef50_Q11BW7 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Mesorhizobium sp. BNC1|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Mesorhizobium sp. (strain BNC1)
Length = 322
Score = 66.9 bits (156), Expect = 7e-10
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEI 513
NA+IPV+ GLQ G +LGG++VVE +F+WPG+G+L V ++ +D+PV+ A +
Sbjct: 241 NALIPVLNQIGLQLGAMLGGAVVVETIFSWPGIGQLAVGALNNQDFPVVLASV 293
>UniRef50_A6TMB0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2; Alkaliphilus
metalliredigens QYMF|Rep: Binding-protein-dependent
transport systems inner membrane component -
Alkaliphilus metalliredigens QYMF
Length = 309
Score = 66.9 bits (156), Expect = 7e-10
Identities = 28/54 (51%), Positives = 41/54 (75%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
N+MI +VT GL G LLGG++VVE +F PGLG+L +D++ +RDYPV+Q ++
Sbjct: 229 NSMITIVTLIGLSIGSLLGGTVVVETIFQLPGLGKLAIDAIGVRDYPVVQGFVV 282
>UniRef50_A6TCS1 Cluster: Outer membrane protein; export and
assembly of type 1 fimbriae; n=1; Klebsiella pneumoniae
subsp. pneumoniae MGH 78578|Rep: Outer membrane protein;
export and assembly of type 1 fimbriae - Klebsiella
pneumoniae subsp. pneumoniae MGH 78578
Length = 845
Score = 66.9 bits (156), Expect = 7e-10
Identities = 29/72 (40%), Positives = 48/72 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A SNA++ ++QN Y IY V G FE++D+ + + SGD V + EADGS +++V ++
Sbjct: 268 VANSNARVEVRQNNYLIYSENVPAGPFELNDISAVNRSGDFYVTVIEADGSQTTFTVAYT 327
Query: 222 SVPLLQRQGRIN 257
++P L R G+ N
Sbjct: 328 TLPQLVRAGQWN 339
>UniRef50_A4ECM8 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 345
Score = 66.9 bits (156), Expect = 7e-10
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG N A NA+IPVVT G+ FG +L G+I+ E VFNWPG+G + ++ MRD
Sbjct: 244 KGLSNRAIIVKHALKNALIPVVTYIGVDFGGMLSGAILTETVFNWPGIGYEVYRAISMRD 303
Query: 536 YPVIQAEILL 507
+P++ + L
Sbjct: 304 WPIVMGGVTL 313
>UniRef50_A1SXD6 Cluster: ABC transporter D-Ala-D-Ala-binding inner
membrane protein precursor; n=2; Proteobacteria|Rep: ABC
transporter D-Ala-D-Ala-binding inner membrane protein
precursor - Psychromonas ingrahamii (strain 37)
Length = 341
Score = 66.9 bits (156), Expect = 7e-10
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA +P++T GL FGFLLGG+++VEKV++WPG+G +D++ DY IQ +L+
Sbjct: 257 ALQNASLPLLTVIGLVFGFLLGGNVLVEKVYSWPGVGTFAIDALVASDYAAIQGFVLI 314
>UniRef50_A0QRE3 Cluster: Dipeptide transport system permease
protein DppB; n=1; Mycobacterium smegmatis str. MC2
155|Rep: Dipeptide transport system permease protein
DppB - Mycobacterium smegmatis (strain ATCC 700084 /
mc(2)155)
Length = 319
Score = 66.9 bits (156), Expect = 7e-10
Identities = 30/54 (55%), Positives = 38/54 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA+ P+V GLQ G+LLGG + VE VF WPGLG+ L S+ RD PV+QA +L
Sbjct: 236 NALPPIVNIIGLQVGYLLGGVVFVEVVFGWPGLGQQLYTSITQRDIPVVQAGVL 289
>UniRef50_A6UJI8 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=4;
Alphaproteobacteria|Rep: Binding-protein-dependent
transport systems inner membrane component -
Sinorhizobium medicae WSM419
Length = 325
Score = 66.5 bits (155), Expect = 1e-09
Identities = 26/53 (49%), Positives = 41/53 (77%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEI 513
N +P+VT GLQFG +L ++VVE +F+WPG+G+LL+DS+++ D PV+ A +
Sbjct: 244 NISVPIVTIIGLQFGGMLAFAVVVETIFSWPGVGKLLIDSIQLLDRPVVMATL 296
>UniRef50_A6UEP6 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Sinorhizobium medicae WSM419|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Sinorhizobium medicae
WSM419
Length = 333
Score = 66.5 bits (155), Expect = 1e-09
Identities = 28/56 (50%), Positives = 41/56 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA +P +T GL LLGGS++VE++F WPG+G L++D + +DY V+QA I+LS
Sbjct: 253 NAFLPTLTAGGLILAQLLGGSVLVERIFVWPGIGTLVIDGILRQDYAVVQAFIMLS 308
>UniRef50_A4W6W0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=3;
Bacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Enterobacter sp. 638
Length = 313
Score = 66.5 bits (155), Expect = 1e-09
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A+ NA++PV+T L FG LLGG+++ E+VF PG G+++VDSV RDY V+Q +L+
Sbjct: 231 AFRNALVPVITLTTLLFGELLGGAVLTEQVFTIPGFGKMIVDSVFNRDYAVVQGVVLI 288
>UniRef50_Q3IPR7 Cluster: ABC-type transport system permease protein
(Probable substrates dipeptide/oligopeptide/nickel) 3;
n=1; Natronomonas pharaonis DSM 2160|Rep: ABC-type
transport system permease protein (Probable substrates
dipeptide/oligopeptide/nickel) 3 - Natronomonas
pharaonis (strain DSM 2160 / ATCC 35678)
Length = 315
Score = 66.5 bits (155), Expect = 1e-09
Identities = 30/56 (53%), Positives = 41/56 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA++PV+T GLQ G + G+++VE VF PGLG LLV++V RDYPV+Q LL+
Sbjct: 231 NALVPVITVVGLQLGMAINGAVIVEVVFQRPGLGALLVEAVFDRDYPVVQGVTLLA 286
>UniRef50_Q123K0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Polaromonas sp. JS666|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 325
Score = 66.1 bits (154), Expect = 1e-09
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++ VVT L GF +GG IV+E VF+WPG+G+ +VD+ DYPV QA L
Sbjct: 243 NALLAVVTVSSLILGFAIGGQIVIETVFSWPGMGKAMVDAAMQHDYPVAQAAFFL 297
>UniRef50_Q0K3A7 Cluster: ABC-type transporter, permease component:
PepT family; n=3; Burkholderiales|Rep: ABC-type
transporter, permease component: PepT family - Ralstonia
eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 318
Score = 66.1 bits (154), Expect = 1e-09
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IPVVT GLQ L+GG++++E++F PG+G LL+D+V RDYPVI L+
Sbjct: 238 NALIPVVTLIGLQAPLLIGGAVIIEQIFALPGMGLLLLDAVHQRDYPVITGVFLV 292
>UniRef50_A5ELU0 Cluster: Putative peptide ABC transporter protein,
permease protein; n=2; Bradyrhizobium sp. BTAi1|Rep:
Putative peptide ABC transporter protein, permease
protein - Bradyrhizobium sp. (strain BTAi1 / ATCC
BAA-1182)
Length = 339
Score = 66.1 bits (154), Expect = 1e-09
Identities = 30/54 (55%), Positives = 40/54 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA++P+VT GLQ G LL G+IVVE VF WPGLGRL ++V+ RDY ++ +L
Sbjct: 259 NALLPLVTIIGLQAGSLLSGAIVVETVFAWPGLGRLAFEAVQQRDYNLLSGLVL 312
>UniRef50_Q2FMZ9 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Methanospirillum hungatei JF-1|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 313
Score = 66.1 bits (154), Expect = 1e-09
Identities = 26/60 (43%), Positives = 43/60 (71%)
Frame = -3
Query: 686 TRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
+ A+ NA +PV+T G+ FG LL GS+++E +F WPG+G LL+ ++ RD VI++ I++
Sbjct: 228 SHAFKNAFLPVLTVIGMSFGSLLAGSVIIETIFTWPGIGALLMKAISARDLVVIESTIMV 287
>UniRef50_O28506 Cluster: Dipeptide ABC transporter, permease
protein; n=10; cellular organisms|Rep: Dipeptide ABC
transporter, permease protein - Archaeoglobus fulgidus
Length = 354
Score = 66.1 bits (154), Expect = 1e-09
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A NA IPVVT GLQF LL G+++ E F+WPG+G L++ +E RDY +Q I+
Sbjct: 272 AMKNAFIPVVTLMGLQFAILLAGAVLTESTFSWPGMGTFLIERIEYRDYTSVQGAIV 328
>UniRef50_Q8UKN0 Cluster: ABC transporter, membrane spanning
protein; n=4; Rhizobiaceae|Rep: ABC transporter,
membrane spanning protein - Agrobacterium tumefaciens
(strain C58 / ATCC 33970)
Length = 304
Score = 65.7 bits (153), Expect = 2e-09
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
NAM+PV+T G Q LL G++V+E +F +PG+G+L++DS+ RD+ V+ A IL++ + +
Sbjct: 225 NAMLPVITVIGDQAASLLNGAVVIETIFGFPGVGKLMIDSILQRDFNVVLAAILVTAFAI 284
Query: 491 FL 486
FL
Sbjct: 285 FL 286
>UniRef50_Q9KFB7 Cluster: Nickel transport system; n=3;
Bacillaceae|Rep: Nickel transport system - Bacillus
halodurans
Length = 314
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/55 (52%), Positives = 40/55 (72%)
Frame = -3
Query: 668 AMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
A+ PV+T G+ G LL G+I+VE+VF+WPG GR VD++ RD PVIQ +LL+
Sbjct: 230 AISPVITGLGMNVGKLLTGTIIVEQVFSWPGFGRYFVDAIFNRDIPVIQCYVLLA 284
>UniRef50_Q73N80 Cluster: Oligopeptide/dipeptide ABC transporter,
permease protein; n=1; Treponema denticola|Rep:
Oligopeptide/dipeptide ABC transporter, permease protein
- Treponema denticola
Length = 317
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/64 (42%), Positives = 42/64 (65%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + T A N++IP++T G+ L+GG++V E+VF WPG+G L+V ++ +D
Sbjct: 222 KGLKRNQIYYTHALKNSLIPIITVVGMSIPSLVGGAVVTEQVFGWPGIGTLMVQAINAKD 281
Query: 536 YPVI 525
YPVI
Sbjct: 282 YPVI 285
>UniRef50_Q18V16 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1;
Desulfitobacterium hafniense DCB-2|Rep:
Binding-protein-dependent transport systems inner
membrane component - Desulfitobacterium hafniense
(strain DCB-2)
Length = 319
Score = 65.3 bits (152), Expect = 2e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
N M+P++T L FG L+GG+ VVE +F+WPGLGRL ++++ RDY +IQ ++
Sbjct: 234 NTMLPIMTLIALSFGELIGGTAVVETIFSWPGLGRLALNAINERDYTIIQGFVV 287
>UniRef50_A6TND9 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=5;
Clostridiales|Rep: Binding-protein-dependent transport
systems inner membrane component - Alkaliphilus
metalliredigens QYMF
Length = 339
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/55 (54%), Positives = 40/55 (72%)
Frame = -3
Query: 686 TRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQ 522
+ A NA++PVVT L FG +GG+I+VE VFN+PG+GRL+ V RDYP+IQ
Sbjct: 256 SHALRNAILPVVTRIFLSFGGAIGGAILVENVFNYPGIGRLMRQGVLFRDYPLIQ 310
>UniRef50_A3W7A7 Cluster: Hypothetical ABC transporter, permease
protein; n=2; Roseovarius|Rep: Hypothetical ABC
transporter, permease protein - Roseovarius sp. 217
Length = 319
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/54 (55%), Positives = 39/54 (72%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQA 519
A NA++P + L +LLGG +VVE VFN+PGLGRLLVD++ RD PV+QA
Sbjct: 231 ALPNALLPAINIIALTVAWLLGGVVVVEVVFNYPGLGRLLVDAISGRDLPVVQA 284
>UniRef50_Q18KK8 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease protein I; n=2;
Halobacteriaceae|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
protein I - Haloquadratum walsbyi (strain DSM 16790)
Length = 335
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 5/67 (7%)
Frame = -3
Query: 707 RNLGCPQT-----RAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEM 543
R G P+T A N ++P+VT GLQ G L+GG+++ E+VF WPGLG LL+D++
Sbjct: 239 RAKGTPETLVRFRHALKNTLVPIVTVLGLQLGTLIGGAVITERVFAWPGLGSLLIDAINA 298
Query: 542 RDYPVIQ 522
R + ++Q
Sbjct: 299 RQWVILQ 305
>UniRef50_P75750 Cluster: Uncharacterized outer membrane usher
protein ybgQ precursor; n=19; Enterobacteriaceae|Rep:
Uncharacterized outer membrane usher protein ybgQ
precursor - Escherichia coli (strain K12)
Length = 815
Score = 65.3 bits (152), Expect = 2e-09
Identities = 33/71 (46%), Positives = 46/71 (64%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA +TI Q+G IYQ V PG F I DL + S G L V++ E DG VN++ V +
Sbjct: 273 IAQTNATVTISQSGRVIYQKKVPPGPFIIDDL-NQSVQGTLDVKVTEEDGRVNNFQVSAA 331
Query: 222 SVPLLQRQGRI 254
S P L RQG++
Sbjct: 332 STPFLTRQGQV 342
>UniRef50_Q6D2Y2 Cluster: ABC transporter permease protein; n=2;
Bacteria|Rep: ABC transporter permease protein - Erwinia
carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 318
Score = 64.9 bits (151), Expect = 3e-09
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++P++T G FG L+ G+IV+E VF PG+G L+VDS+E RD+ VIQ +LL
Sbjct: 234 NALLPILTICGESFGSLVTGTIVIESVFGIPGVGSLVVDSIERRDFSVIQGAVLL 288
>UniRef50_Q63P53 Cluster: Outer membrane usher protein; n=15;
Burkholderia|Rep: Outer membrane usher protein -
Burkholderia pseudomallei (Pseudomonas pseudomallei)
Length = 877
Score = 64.9 bits (151), Expect = 3e-09
Identities = 31/69 (44%), Positives = 42/69 (60%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++ ++Q G IY+ V PG FE DL T GDL V I E+DG ++VPF+
Sbjct: 298 VADTNARVAVRQRGNVIYEASVPPGPFEFDDLPPTGYGGDLDVTITESDGRTKHFTVPFA 357
Query: 222 SVPLLQRQG 248
SV L R G
Sbjct: 358 SVRQLLRPG 366
>UniRef50_Q5WLH9 Cluster: Dipeptide/oligopeptide/nickel ABC
transporter permease; n=1; Bacillus clausii KSM-K16|Rep:
Dipeptide/oligopeptide/nickel ABC transporter permease -
Bacillus clausii (strain KSM-K16)
Length = 312
Score = 64.9 bits (151), Expect = 3e-09
Identities = 33/88 (37%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQ-----AEILL 507
NA+ P++ G+ G LLGG++VVE +F++PGLG+L +D+++ RDYP+IQ +++
Sbjct: 228 NALSPLLGMFGVTVGSLLGGTVVVEVLFSYPGLGKLSIDAIQNRDYPIIQGYMVVVALMI 287
Query: 506 SRWNLFL-ST*WWMCFTPPLTRLSGTSK 426
+ +NL + + WW+ P RL G +
Sbjct: 288 TFFNLMIDAIQWWL---QPEIRLRGRKR 312
>UniRef50_Q11FN3 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=2;
Bacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor -
Mesorhizobium sp. (strain BNC1)
Length = 306
Score = 64.9 bits (151), Expect = 3e-09
Identities = 32/77 (41%), Positives = 49/77 (63%)
Frame = -3
Query: 737 IMVPRGXKGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLV 558
+ RG KG + + A NA IP +T GLQ G LLGG+++ E+VF +PG+GRL +
Sbjct: 204 VRTARG-KGVKESRIILSHALRNAAIPTLTVIGLQVGALLGGAVITEEVFAYPGVGRLAI 262
Query: 557 DSVEMRDYPVIQAEILL 507
++ RD+ V+QA ++L
Sbjct: 263 QAIANRDFTVVQAFVVL 279
>UniRef50_A4W5W1 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=12; Enterobacteriaceae|Rep:
Fimbrial biogenesis outer membrane usher protein
precursor - Enterobacter sp. 638
Length = 835
Score = 64.9 bits (151), Expect = 3e-09
Identities = 30/75 (40%), Positives = 49/75 (65%)
Frame = +3
Query: 30 DTVDLAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYS 209
+ +AK+NA++TI Q G +Y+T V+ G F I DL +++ +G+L V ++E DGSV Y
Sbjct: 293 EVTGVAKTNAKVTISQQGRVLYETQVAAGPFAIQDL-NSAVAGELDVRVQEQDGSVQEYK 351
Query: 210 VPFSSVPLLQRQGRI 254
V +++P L R G +
Sbjct: 352 VNTANIPYLTRPGSV 366
>UniRef50_Q8TLI7 Cluster: Oligopeptide ABC transporter, permease
protein; n=4; Methanomicrobia|Rep: Oligopeptide ABC
transporter, permease protein - Methanosarcina
acetivorans
Length = 331
Score = 64.9 bits (151), Expect = 3e-09
Identities = 31/60 (51%), Positives = 41/60 (68%)
Frame = -3
Query: 689 QTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
Q A NA+IPV+ G QFG+L GG++++E +F PGLGRLLV+SV D V+Q IL
Sbjct: 243 QRHALKNALIPVLIYMGTQFGWLFGGAVIIESMFALPGLGRLLVESVSSMDIMVVQGCIL 302
>UniRef50_A3ZVY1 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Blastopirellula marina DSM 3645|Rep:
Oligopeptide ABC transporter permease protein -
Blastopirellula marina DSM 3645
Length = 302
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/58 (48%), Positives = 38/58 (65%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA +P+V G Q G LL G+++ E VFNWPG+GR LV +V +DY V+Q L+
Sbjct: 218 ALPNASVPIVNIAGFQVGMLLSGAVLTETVFNWPGMGRYLVTAVREQDYAVVQGGALV 275
>UniRef50_P53517 Cluster: Outer membrane usher protein afaC
precursor; n=11; Escherichia coli|Rep: Outer membrane
usher protein afaC precursor - Escherichia coli
Length = 859
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/69 (40%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++ A+I ++QNGY I V+PGAF ++DL T S DL V + E+DG+ ++VPF+
Sbjct: 299 IARTQARIEVRQNGYLIQSQTVAPGAFALTDLPVTGSGSDLQVTVLESDGTAQVFTVPFT 358
Query: 222 SVPLLQRQG 248
+ + R+G
Sbjct: 359 TPAIALREG 367
Score = 35.5 bits (78), Expect = 2.0
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 227 AITPASGANQYAVTLAKYRTNSNEQQESKFAQATLQWGGPWG-TTWSGL 370
AI G +Y VT +YR++ + + + Q T +G PWG T + GL
Sbjct: 361 AIALREGYLKYNVTAGQYRSSDDAVEHTSLGQVTAMYGLPWGLTVYGGL 409
>UniRef50_Q3ZZ44 Cluster: Peptide ABC transporter, permease protein;
n=3; Dehalococcoides|Rep: Peptide ABC transporter,
permease protein - Dehalococcoides sp. (strain CBDB1)
Length = 324
Score = 64.1 bits (149), Expect = 5e-09
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
N++ P+VT +QFG L G ++VE VF+WPG+G L+ +++ RDYP+IQ L+
Sbjct: 246 NSLAPLVTVTAIQFGMLFSGVLLVETVFSWPGMGTLIYEAIGARDYPLIQGAFLI 300
>UniRef50_Q3IF63 Cluster: Peptide transport protein; n=3;
Alteromonadales|Rep: Peptide transport protein -
Pseudoalteromonas haloplanktis (strain TAC 125)
Length = 344
Score = 64.1 bits (149), Expect = 5e-09
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA++PV+ GLQF L+ +++ E +F+WPG+GR L+DS+ RDYP IQ ++
Sbjct: 259 NALLPVIKQIGLQFSTLITLAMITEIIFSWPGIGRWLIDSIYQRDYPAIQGGLM 312
>UniRef50_A6TTE0 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Alkaliphilus metalliredigens QYMF|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Alkaliphilus
metalliredigens QYMF
Length = 323
Score = 64.1 bits (149), Expect = 5e-09
Identities = 29/70 (41%), Positives = 42/70 (60%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A NA++PVVT L G +GG +++E VF+WPGLGR +V +V RD
Sbjct: 228 KGLKERTILYKHAARNALLPVVTAGALFIGSAIGGQVLIEYVFSWPGLGREIVQAVTRRD 287
Query: 536 YPVIQAEILL 507
YP+ Q ++
Sbjct: 288 YPLAQGAFII 297
>UniRef50_A3K511 Cluster: Nickel ABC transporter, permease protein;
n=1; Sagittula stellata E-37|Rep: Nickel ABC
transporter, permease protein - Sagittula stellata E-37
Length = 313
Score = 64.1 bits (149), Expect = 5e-09
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
+G R+ A NA +P +T G+ G LLGGS ++E++F WPGLG + ++ RD
Sbjct: 216 RGARSRRTLLIHALPNAALPFLTAIGVSIGALLGGSPIIEELFTWPGLGSYTLAALTARD 275
Query: 536 YPVIQAEILLS 504
+PVIQA +L+S
Sbjct: 276 FPVIQAFVLVS 286
>UniRef50_P33591 Cluster: Nickel transport system permease protein
nikB; n=25; Proteobacteria|Rep: Nickel transport system
permease protein nikB - Escherichia coli (strain K12)
Length = 314
Score = 63.7 bits (148), Expect = 7e-09
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA +P++T G+ G L+GG++++E +F WPG+GR V ++ RDYPVIQ L+
Sbjct: 229 NASLPMITAVGMHIGELIGGTMIIENIFAWPGVGRYAVSAIFNRDYPVIQCFTLM 283
>UniRef50_Q7WEA7 Cluster: Inner membrane component of
binding-protein-dependent transport system; n=17;
cellular organisms|Rep: Inner membrane component of
binding-protein-dependent transport system - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 328
Score = 63.3 bits (147), Expect = 9e-09
Identities = 24/56 (42%), Positives = 40/56 (71%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA++PV+T G+Q G + GG+++ E VF WPG+GRL+ D++ RDY ++ L++
Sbjct: 248 NALLPVITFAGIQLGQMAGGAVLTETVFGWPGIGRLMFDALVQRDYQLLLGVFLIT 303
>UniRef50_Q12FS6 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=8;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 313
Score = 63.3 bits (147), Expect = 9e-09
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++P+VT GL L+GG++V E VF PG+G L+V +V RDYPVIQ +L+
Sbjct: 234 NALVPIVTVLGLTVALLIGGAVVTETVFGLPGVGNLVVSAVLRRDYPVIQGALLV 288
>UniRef50_Q12DJ8 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=9;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Polaromonas
sp. (strain JS666 / ATCC BAA-500)
Length = 314
Score = 63.3 bits (147), Expect = 9e-09
Identities = 34/58 (58%), Positives = 39/58 (67%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A+ N+ P T GL G LLGG VVE VF PGLGRLLVD++ RDYPVIQ +LL
Sbjct: 231 AFRNSFGPTWTLIGLVLGNLLGGVAVVETVFTIPGLGRLLVDAIFARDYPVIQGCLLL 288
>UniRef50_A6TPV5 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Alkaliphilus
metalliredigens QYMF|Rep: Binding-protein-dependent
transport systems inner membrane component -
Alkaliphilus metalliredigens QYMF
Length = 306
Score = 63.3 bits (147), Expect = 9e-09
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A NA++PVVT GLQ G+ LGGS++VE VF +PG+GR + + RD
Sbjct: 211 KGLRAQIVIYKHALKNALLPVVTVIGLQLGYRLGGSVIVETVFAYPGIGRFAYNRLLARD 270
Query: 536 YPVIQAEILL 507
+P+I + +
Sbjct: 271 FPMIMGNLFI 280
>UniRef50_P76655 Cluster: Uncharacterized outer membrane usher
protein yqiG precursor; n=15; Escherichia coli|Rep:
Uncharacterized outer membrane usher protein yqiG
precursor - Escherichia coli (strain K12)
Length = 821
Score = 63.3 bits (147), Expect = 9e-09
Identities = 30/71 (42%), Positives = 48/71 (67%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA++T+ QN IYQ V PG F I++L++T G L V+++E DG V + V +
Sbjct: 275 VAQTNAKVTVSQNNRIIYQENVPPGPFAITNLFNT-LQGQLDVKVEEEDGRVTQWQVASN 333
Query: 222 SVPLLQRQGRI 254
S+P L R+G+I
Sbjct: 334 SIPYLTRKGQI 344
>UniRef50_Q9KBX7 Cluster: Nickel ABC transporter; n=2; Bacillus|Rep:
Nickel ABC transporter - Bacillus halodurans
Length = 315
Score = 62.9 bits (146), Expect = 1e-08
Identities = 26/62 (41%), Positives = 45/62 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
+++ PV+T G+ G L+GG +V+E +F +PG+G+L+VD++ RDYP+IQ IL+ +
Sbjct: 229 HSLPPVITVFGVSLGSLIGGVVVIEVLFAYPGIGKLVVDAIRQRDYPLIQGYILVMALIV 288
Query: 491 FL 486
F+
Sbjct: 289 FV 290
>UniRef50_Q989T3 Cluster: ABC transporter, permease protein; n=2;
Rhizobiales|Rep: ABC transporter, permease protein -
Rhizobium loti (Mesorhizobium loti)
Length = 314
Score = 62.9 bits (146), Expect = 1e-08
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = -3
Query: 662 IPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
+P+VT G+ F ++LGG ++ E VF PG+GRLLVD+++ +D PVIQ +L+S
Sbjct: 237 VPLVTIVGMSFAYMLGGVVITETVFAIPGVGRLLVDAIQHKDVPVIQGVLLIS 289
>UniRef50_Q81UG5 Cluster: Oligopeptide ABC transporter, permease
protein; n=9; Bacillus cereus group|Rep: Oligopeptide
ABC transporter, permease protein - Bacillus anthracis
Length = 316
Score = 62.9 bits (146), Expect = 1e-08
Identities = 29/62 (46%), Positives = 41/62 (66%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
N +IP++T GL L+GG+ + E VF+WPGLG L V+++ DYP+I A LLS + L
Sbjct: 235 NVLIPIITIFGLSIPSLVGGAFITETVFSWPGLGSLGVNAIFRFDYPIIMAITLLSSFML 294
Query: 491 FL 486
L
Sbjct: 295 IL 296
>UniRef50_A1WRD7 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Verminephrobacter eiseniae EF01-2|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Verminephrobacter
eiseniae (strain EF01-2)
Length = 338
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/55 (49%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA +P VT G+QFGFL GG+++VE +F +PG+G L+V +V D P+IQ L+
Sbjct: 258 NAALPTVTMIGVQFGFLFGGALLVEMIFGFPGVGNLMVQAVRGNDLPLIQGIALI 312
>UniRef50_A6UUC5 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Methanococcus aeolicus Nankai-3|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Methanococcus aeolicus
Nankai-3
Length = 314
Score = 62.9 bits (146), Expect = 1e-08
Identities = 23/70 (32%), Positives = 40/70 (57%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG N NA +PV+T G++ +LLGG++++E +F WPG+G +D + +D
Sbjct: 216 KGLSNKVVVLKHVLKNAFLPVITLMGMKTAYLLGGAVIIESIFGWPGIGSYFIDIINAKD 275
Query: 536 YPVIQAEILL 507
YP + + +
Sbjct: 276 YPAVSGLVFI 285
Score = 37.9 bits (84), Expect = 0.38
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = -2
Query: 534 PGDSGGNSAFSLEFILINLVVDVLYAAINPAIRYK*G 424
P SG F + F+L+NL+VD+ YA ++P +RY G
Sbjct: 277 PAVSGLVFIFGILFVLVNLIVDISYAILDPRVRYDKG 313
>UniRef50_Q9KFX2 Cluster: Oligopeptide ABC transporter; n=4;
Firmicutes|Rep: Oligopeptide ABC transporter - Bacillus
halodurans
Length = 305
Score = 62.5 bits (145), Expect = 2e-08
Identities = 28/66 (42%), Positives = 43/66 (65%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A+ N++IP+VT LQ ++GG+++ E VF+WPGLG+LL+ +V RD
Sbjct: 210 KGIREGMVVYKHAFRNSLIPLVTIVALQTSTVVGGTLITETVFSWPGLGQLLIQAVHTRD 269
Query: 536 YPVIQA 519
++QA
Sbjct: 270 MAIVQA 275
>UniRef50_Q981Q7 Cluster: ABC transporter, permease protein; n=12;
Proteobacteria|Rep: ABC transporter, permease protein -
Rhizobium loti (Mesorhizobium loti)
Length = 313
Score = 62.5 bits (145), Expect = 2e-08
Identities = 29/58 (50%), Positives = 41/58 (70%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A+ NA+IP++T GL G + G+++VE VF WPG+G+LLV SV RD V+Q +LL
Sbjct: 225 AFPNAIIPILTLLGLMLGGQVAGAVLVENVFGWPGIGQLLVVSVGNRDLAVVQVILLL 282
>UniRef50_Q6YR28 Cluster: ABC-type dipeptide/oligopeptide transport
system, permease component; n=2; Candidatus Phytoplasma
asteris|Rep: ABC-type dipeptide/oligopeptide transport
system, permease component - Onion yellows phytoplasma
Length = 308
Score = 62.5 bits (145), Expect = 2e-08
Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL-- 507
A NA+IPVV + GL FL+GGSI+ E +F G+G L+ + + R+YPVIQ I+L
Sbjct: 224 ALKNALIPVVAHIGLLLSFLIGGSIITENIFEIKGVGVLIKHAFDNRNYPVIQCCIILLA 283
Query: 506 ---SRWNLFL 486
+ WNLFL
Sbjct: 284 LFIAIWNLFL 293
>UniRef50_Q39GP9 Cluster: Fimbrial biogenesis outer membrane usher
protein; n=21; Burkholderia|Rep: Fimbrial biogenesis
outer membrane usher protein - Burkholderia sp. (strain
383) (Burkholderia cepacia (strain ATCC 17760/ NCIB 9086
/ R18194))
Length = 828
Score = 62.5 bits (145), Expect = 2e-08
Identities = 30/71 (42%), Positives = 47/71 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++NA +T+ Q G +Y T VSPGAF + ++ +TS G L V ++E DGSV + V +
Sbjct: 279 VARTNATVTVSQAGRVLYVTRVSPGAFALQNI-NTSVQGTLDVAVEEEDGSVQRFQVTTA 337
Query: 222 SVPLLQRQGRI 254
+VP L R G++
Sbjct: 338 AVPFLARAGQL 348
>UniRef50_Q1GCZ0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=25;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component - Silicibacter sp.
(strain TM1040)
Length = 344
Score = 62.5 bits (145), Expect = 2e-08
Identities = 28/63 (44%), Positives = 42/63 (66%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
NA++P VT L FG L GGS++ E VFN+PG+G LL + RD+P+IQ ++L+ +
Sbjct: 264 NALLPSVTALALSFGALFGGSLITEVVFNYPGVGNLLYLGIVGRDFPLIQGQLLIMTLAM 323
Query: 491 FLS 483
L+
Sbjct: 324 LLA 326
>UniRef50_A7BDU5 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 316
Score = 62.5 bits (145), Expect = 2e-08
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Frame = -3
Query: 707 RNLGCPQTRA---YVN-AMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMR 540
R+ G P R YV A +P++T+ GL G L G +++VE+ F+ PGLG+LL DS+ +
Sbjct: 215 RSRGVPHRRITAMYVRGAALPIITSAGLILGTLFGSTVLVEEAFSLPGLGQLLADSITYK 274
Query: 539 DYPVIQAEILLSRWNLFLST 480
D PV+QA LL + + + T
Sbjct: 275 DVPVVQAIALLVAFVIIVVT 294
>UniRef50_A6Q8P1 Cluster: Dipeptide ABC transporter, permease; n=1;
Sulfurovum sp. NBC37-1|Rep: Dipeptide ABC transporter,
permease - Sulfurovum sp. (strain NBC37-1)
Length = 317
Score = 62.5 bits (145), Expect = 2e-08
Identities = 25/58 (43%), Positives = 42/58 (72%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A+ N ++P++T G+QFG L+ +IV E +F WPG G+L++DS++ D PV+ A +L+
Sbjct: 234 AFKNTLLPLITVIGIQFGQLIAFTIVTETIFAWPGTGKLIIDSIQNLDRPVVIAYLLV 291
>UniRef50_A3JXK8 Cluster: ABC transporter permease protein; n=1;
Sagittula stellata E-37|Rep: ABC transporter permease
protein - Sagittula stellata E-37
Length = 296
Score = 62.5 bits (145), Expect = 2e-08
Identities = 28/59 (47%), Positives = 40/59 (67%)
Frame = -3
Query: 686 TRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
T NA +P++T GL FG L+ G++V E +FN PG+G LLV+++ RDY VIQ +L
Sbjct: 207 THTLRNAGLPILTMVGLSFGTLVTGAVVTEAIFNIPGIGSLLVNAISRRDYAVIQGVVL 265
>UniRef50_A1W4F8 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=34;
Proteobacteria|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Acidovorax
sp. (strain JS42)
Length = 336
Score = 62.5 bits (145), Expect = 2e-08
Identities = 32/55 (58%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NAMIPVVT GLQF LL G+IVVE VF PGLGRL+ S+ RD V++ ++L
Sbjct: 254 NAMIPVVTVMGLQFANLLAGTIVVENVFYLPGLGRLIFQSIANRDLVVVRNCVML 308
>UniRef50_A0KFM8 Cluster: Outer membrane usher protein; n=3;
Gammaproteobacteria|Rep: Outer membrane usher protein -
Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966
/ NCIB 9240)
Length = 844
Score = 62.5 bits (145), Expect = 2e-08
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AK+NA++TI Q+G +Y+T V G F I L +S G L V ++E DGSVNS+ V +
Sbjct: 291 IAKTNAKVTISQSGRILYETNVPAGPFRIQGL-DSSVRGRLDVRVEEQDGSVNSFQVDTA 349
Query: 222 SVPLLQRQGRI 254
+VP L R G +
Sbjct: 350 TVPYLTRPGYV 360
>UniRef50_Q98BT0 Cluster: ABC transporter, permease protein; n=5;
Proteobacteria|Rep: ABC transporter, permease protein -
Rhizobium loti (Mesorhizobium loti)
Length = 335
Score = 62.1 bits (144), Expect = 2e-08
Identities = 26/58 (44%), Positives = 43/58 (74%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA +P +T G+QF FL+GG+++VE++F++ GLG + +D+V RD P+IQ +L+
Sbjct: 252 ALKNASLPTLTLVGVQFTFLIGGTVIVERLFSYEGLGNMAIDAVINRDLPLIQGIVLV 309
Score = 36.7 bits (81), Expect = 0.89
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = -2
Query: 507 FSLEFILINLVVDVLYAAINPAIRY 433
F+L F+LINL VD++YA +NP +R+
Sbjct: 310 FALLFVLINLAVDMMYALLNPRLRH 334
>UniRef50_Q663X9 Cluster: Outer membrane fimbrial usher porin
precursor; n=15; Yersinia|Rep: Outer membrane fimbrial
usher porin precursor - Yersinia pseudotuberculosis
Length = 832
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/71 (40%), Positives = 46/71 (64%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A +NA++ + QNG +YQT V+PG F I D+ S + G++ V ++E DG V + V +
Sbjct: 289 IAHTNARVVLSQNGRVLYQTNVAPGPFVIQDI-SEAVQGNIDVRVEEEDGRVTVFQVNAA 347
Query: 222 SVPLLQRQGRI 254
SVP L R+G +
Sbjct: 348 SVPFLTRKGAV 358
>UniRef50_Q5QUD4 Cluster: ABC-type dipeptide transport systems,
permease component; n=2; Idiomarina|Rep: ABC-type
dipeptide transport systems, permease component -
Idiomarina loihiensis
Length = 342
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA+ V+ L F LL SIVVE +FNWPG+G L+ S+ RDYP+IQA +L+
Sbjct: 254 AIPNAVQSVLQQTTLIFSLLLTNSIVVESIFNWPGMGNWLIRSIFERDYPIIQAAVLM 311
>UniRef50_Q1LMX8 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=6;
Burkholderiales|Rep: Binding-protein-dependent transport
systems inner membrane component precursor - Ralstonia
metallidurans (strain CH34 / ATCC 43123 / DSM 2839)
Length = 340
Score = 62.1 bits (144), Expect = 2e-08
Identities = 23/49 (46%), Positives = 38/49 (77%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVI 525
NA++PV+T G+Q G + GG+++ E VF+WPG+GRL+ D++ RDY ++
Sbjct: 254 NALLPVITFAGIQLGQMAGGAVLTETVFSWPGIGRLMFDALLQRDYQLL 302
>UniRef50_Q0S9Q7 Cluster: ABC dipeptide transporter, permease
component; n=7; Bacteria|Rep: ABC dipeptide transporter,
permease component - Rhodococcus sp. (strain RHA1)
Length = 308
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG +L A NA P +T G L+ G++VVE +F WPG+G+L++D++ RD
Sbjct: 210 KGAGDLRVVTHHALRNAAAPALTVAGDLTVGLVNGAVVVEAIFGWPGIGKLMIDAILQRD 269
Query: 536 YPVIQAEILLSRWNLFL 486
+ V+QA +LL+ ++F+
Sbjct: 270 FAVLQAAVLLTAVSIFV 286
>UniRef50_A5ZYP1 Cluster: Putative uncharacterized protein; n=1;
Ruminococcus obeum ATCC 29174|Rep: Putative
uncharacterized protein - Ruminococcus obeum ATCC 29174
Length = 314
Score = 62.1 bits (144), Expect = 2e-08
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEI 513
++M+ ++T L G LLGG+ +VE +F W G+G++ VD++ MRDYP+IQA +
Sbjct: 230 SSMLTIITLLALSIGSLLGGTTIVETIFMWDGVGKMAVDAITMRDYPIIQAYV 282
>UniRef50_A5WXU5 Cluster: LecB; n=6; Proteobacteria|Rep: LecB -
Agrobacterium tumefaciens
Length = 313
Score = 62.1 bits (144), Expect = 2e-08
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG + A NA+IP+VT GL FG ++G S++VE VF PGLG+L++ +++ RD
Sbjct: 217 KGVKTKSIIMRHALGNALIPIVTVVGLNFGTMIGNSVLVEIVFTRPGLGKLILGALQSRD 276
Query: 536 YPVIQ 522
Y ++Q
Sbjct: 277 YTMLQ 281
>UniRef50_A1AYK8 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Paracoccus
denitrificans PD1222|Rep: Binding-protein-dependent
transport systems inner membrane component - Paracoccus
denitrificans (strain Pd 1222)
Length = 311
Score = 62.1 bits (144), Expect = 2e-08
Identities = 30/70 (42%), Positives = 43/70 (61%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A NA++P+ T GL L GS+ VE VFN PGLG+LL+ ++ RD
Sbjct: 216 KGARENRVIYRHALRNALLPLSTGLGLSILSTLSGSVAVELVFNRPGLGKLLITAITERD 275
Query: 536 YPVIQAEILL 507
YP++QA +++
Sbjct: 276 YPIVQAGVVV 285
>UniRef50_Q8Z0F6 Cluster: Permease protein of oligopeptide ABC
transporter; n=33; Cyanobacteria|Rep: Permease protein
of oligopeptide ABC transporter - Anabaena sp. (strain
PCC 7120)
Length = 341
Score = 61.7 bits (143), Expect = 3e-08
Identities = 27/59 (45%), Positives = 38/59 (64%)
Frame = -3
Query: 686 TRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
+ A NA+IPV+T GL F LLGG+I+ E F+WPGL L ++ RDYP +Q ++
Sbjct: 257 SHALKNALIPVITVLGLTFASLLGGAILTEVTFSWPGLANRLYQAISDRDYPTVQGVLV 315
>UniRef50_Q5FP38 Cluster: Dipeptide ABC transport system permease
protein DppB; n=1; Gluconobacter oxydans|Rep: Dipeptide
ABC transport system permease protein DppB -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 335
Score = 61.7 bits (143), Expect = 3e-08
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA+IPV+T G+Q L+ G+I+VE VF+ PG G+LL+++V RD PV+Q ++L
Sbjct: 250 ALPNALIPVLTLAGIQLPVLVTGTIIVESVFSLPGCGKLLLEAVNQRDIPVVQNLVML 307
>UniRef50_Q18QN7 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=2;
Desulfitobacterium hafniense|Rep:
Binding-protein-dependent transport systems inner
membrane component - Desulfitobacterium hafniense
(strain DCB-2)
Length = 314
Score = 61.7 bits (143), Expect = 3e-08
Identities = 25/55 (45%), Positives = 41/55 (74%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NAM+PVVT GL G +LG ++VVE +F PG+G+L+++++ RD+ V+Q +L+
Sbjct: 235 NAMLPVVTTIGLLMGTMLGATVVVENIFAIPGMGQLVINAIGQRDFTVVQGVVLV 289
>UniRef50_Q0SBH3 Cluster: ABC peptide transporter, permease
component; n=1; Rhodococcus sp. RHA1|Rep: ABC peptide
transporter, permease component - Rhodococcus sp.
(strain RHA1)
Length = 319
Score = 61.7 bits (143), Expect = 3e-08
Identities = 28/59 (47%), Positives = 41/59 (69%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
A NA+ V+T GL G LLGG+++VE +F WPGLG L +++ RDYP++Q ++LS
Sbjct: 233 ALPNALPSVLTVLGLTVGGLLGGAVLVESIFVWPGLGLLTEEAINSRDYPLVQVLLVLS 291
>UniRef50_A3ZV28 Cluster: Peptide ABC transporter, permease protein;
n=2; Planctomycetaceae|Rep: Peptide ABC transporter,
permease protein - Blastopirellula marina DSM 3645
Length = 328
Score = 61.7 bits (143), Expect = 3e-08
Identities = 24/58 (41%), Positives = 40/58 (68%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A+ N++IP VT GL L G+I++EK+F+WPG+G L ++++ RDYP+ +L+
Sbjct: 245 AFRNSLIPFVTLIGLTLPSLFSGAIIIEKIFSWPGMGALFLEAISQRDYPLEMGLVLM 302
>UniRef50_Q8PU83 Cluster: Dipeptide/oligopeptide transporter,
permease protein; n=3; Methanosarcina|Rep:
Dipeptide/oligopeptide transporter, permease protein -
Methanosarcina mazei (Methanosarcina frisia)
Length = 327
Score = 61.7 bits (143), Expect = 3e-08
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PVVT G G ++GG ++VE VF++PG+G L +V RDYP+IQ +L+
Sbjct: 248 NALLPVVTRTGFMIGIMMGGVVLVESVFSYPGIGMTLRSAVIGRDYPLIQGILLV 302
>UniRef50_Q5V091 Cluster: Dipeptide ABC transporter permease; n=5;
cellular organisms|Rep: Dipeptide ABC transporter
permease - Haloarcula marismortui (Halobacterium
marismortui)
Length = 360
Score = 61.7 bits (143), Expect = 3e-08
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA+IPVVT G+QFG LLGG+++ E VF G+G +V ++ + DYPV+Q +L
Sbjct: 281 NALIPVVTVIGIQFGTLLGGAVLTETVFGINGMGLTIVTAIGVSDYPVVQGTVL 334
>UniRef50_Q67T79 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Symbiobacterium thermophilum|Rep:
Oligopeptide ABC transporter permease protein -
Symbiobacterium thermophilum
Length = 306
Score = 61.3 bits (142), Expect = 4e-08
Identities = 30/59 (50%), Positives = 40/59 (67%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
A NA+IPV+T GL+ G LL GSI+ E VF PGLG + + + D+PVIQA +LL+
Sbjct: 223 ALKNALIPVITVVGLEIGGLLTGSILTESVFGIPGLGLVTIRGLNALDFPVIQATVLLT 281
>UniRef50_Q67KR8 Cluster: Oligopeptide ABC transporter permease
protein; n=1; Symbiobacterium thermophilum|Rep:
Oligopeptide ABC transporter permease protein -
Symbiobacterium thermophilum
Length = 321
Score = 61.3 bits (142), Expect = 4e-08
Identities = 28/55 (50%), Positives = 38/55 (69%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PV+T GL LLGG+I+ E +F WPG+GRL ++ RDYPV+ A LL
Sbjct: 241 NALMPVITLLGLNLPALLGGAIITESLFQWPGVGRLTYTALLERDYPVLMALNLL 295
>UniRef50_Q2CC32 Cluster: ABC transporter permease protein; n=1;
Oceanicola granulosus HTCC2516|Rep: ABC transporter
permease protein - Oceanicola granulosus HTCC2516
Length = 314
Score = 61.3 bits (142), Expect = 4e-08
Identities = 26/55 (47%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
N IP+VT GL +LGG +++E +F PGLGRLL+ ++E RDYP++Q +L+
Sbjct: 234 NVAIPIVTFMGLILIQILGGVVIIESLFALPGLGRLLLSAIETRDYPIVQGALLV 288
>UniRef50_Q28TH0 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Jannaschia sp.
CCS1|Rep: Binding-protein-dependent transport systems
inner membrane component - Jannaschia sp. (strain CCS1)
Length = 302
Score = 61.3 bits (142), Expect = 4e-08
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
NA IP+VT GL G L+ GS+V E+VF WPG+G+LLV SV RD +Q +L+ + +
Sbjct: 222 NAAIPLVTLIGLSLGALVAGSVVTEQVFAWPGVGQLLVRSVATRDLAQVQFLVLVVAFTM 281
Query: 491 FLS 483
++
Sbjct: 282 VMA 284
>UniRef50_Q1FG01 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Clostridium phytofermentans ISDg|Rep:
Binding-protein-dependent transport systems inner
membrane component precursor - Clostridium
phytofermentans ISDg
Length = 313
Score = 61.3 bits (142), Expect = 4e-08
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA+IPV+T G+ L GSIVVE+VFN PG+GR+LV ++ RD+ V+ A +L
Sbjct: 233 NALIPVITFFGMLTADALAGSIVVEQVFNLPGMGRMLVSAIANRDFSVVSAAVL 286
>UniRef50_A7NQN7 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=1; Roseiflexus
castenholzii DSM 13941|Rep: Binding-protein-dependent
transport systems inner membrane component - Roseiflexus
castenholzii DSM 13941
Length = 307
Score = 61.3 bits (142), Expect = 4e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
N ++P++T G+QFG LLGG++V+E VF GLG L+ +V RD+PV+Q +L++
Sbjct: 227 NGLLPLITMIGMQFGTLLGGAVVIENVFARQGLGTLVTQAVINRDFPVVQGCVLVA 282
>UniRef50_A5EEY0 Cluster: Putative ABC transporter, permease
protein; n=1; Bradyrhizobium sp. BTAi1|Rep: Putative ABC
transporter, permease protein - Bradyrhizobium sp.
(strain BTAi1 / ATCC BAA-1182)
Length = 328
Score = 61.3 bits (142), Expect = 4e-08
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A NA +PV+T GLQ +LGGSIV+E VF WPGLG+L ++V RD
Sbjct: 227 KGAREGRVMFGHALRNATLPVLTMLGLQSSAVLGGSIVIETVFAWPGLGQLSFEAVRSRD 286
Query: 536 YPVIQAEILLS 504
++ +LLS
Sbjct: 287 VQLLLGVLLLS 297
>UniRef50_O58538 Cluster: 323aa long hypothetical oligopeptide
transport permease protein APPB; n=1; Pyrococcus
horikoshii|Rep: 323aa long hypothetical oligopeptide
transport permease protein APPB - Pyrococcus horikoshii
Length = 323
Score = 61.3 bits (142), Expect = 4e-08
Identities = 27/55 (49%), Positives = 38/55 (69%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++P VT GL+ G+ G+ +VE VF WPG+GRLL+D+ RDYP+I L+
Sbjct: 244 NAILPPVTILGLRLGYAFSGAALVEIVFGWPGMGRLLLDAAFARDYPLIMGIYLV 298
>UniRef50_Q9RVR3 Cluster: Peptide ABC transporter, permease protein;
n=5; Bacteria|Rep: Peptide ABC transporter, permease
protein - Deinococcus radiodurans
Length = 345
Score = 60.9 bits (141), Expect = 5e-08
Identities = 25/54 (46%), Positives = 39/54 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA++P+VT GLQ G LLGG+++ E +F+W G+G L D++ RD+ VIQ ++
Sbjct: 265 NALLPIVTVIGLQIGGLLGGAVLTETIFSWNGVGSWLYDAISARDFFVIQGGVI 318
>UniRef50_Q97GJ1 Cluster: Oligopeptide ABC-type transporter,
permease; n=1; Clostridium acetobutylicum|Rep:
Oligopeptide ABC-type transporter, permease -
Clostridium acetobutylicum
Length = 317
Score = 60.9 bits (141), Expect = 5e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVI 525
A NAMIP+VT G+ L G+IV E++F WPG+G+L +D+V RDYP++
Sbjct: 234 ALKNAMIPLVTIFGISIANLFTGAIVTEEIFGWPGIGKLSLDAVLQRDYPLL 285
>UniRef50_Q47XM7 Cluster: Peptide ABC transporter, permease protein;
n=1; Colwellia psychrerythraea 34H|Rep: Peptide ABC
transporter, permease protein - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 342
Score = 60.9 bits (141), Expect = 5e-08
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNL 492
NA+I ++ + GLQF L+ ++V E +F+WPG+GR L+DS+ RDY IQ+ +L+ +
Sbjct: 258 NALIQIIRHVGLQFANLVTIAMVTEVIFSWPGIGRWLIDSIYQRDYTAIQSGLLVLSCFI 317
Query: 491 FL 486
F+
Sbjct: 318 FI 319
>UniRef50_A5W749 Cluster: Fimbrial biogenesis outer membrane usher
protein precursor; n=7; Pseudomonas|Rep: Fimbrial
biogenesis outer membrane usher protein precursor -
Pseudomonas putida F1
Length = 857
Score = 60.9 bits (141), Expect = 5e-08
Identities = 27/69 (39%), Positives = 46/69 (66%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+A++ A+I + +NG+ IY +YV+PG + I DL + G+L V + E+DG V+ + P+S
Sbjct: 298 VAQTRAKIEVLRNGFPIYSSYVAPGPYAIDDLSVGAGHGELEVVVTESDGQVSRFIQPYS 357
Query: 222 SVPLLQRQG 248
S+ L R+G
Sbjct: 358 SLGSLLREG 366
>UniRef50_Q2FH55 Cluster: Putative oligopeptide transport system
permease protein oppB2; n=15; Staphylococcus|Rep:
Putative oligopeptide transport system permease protein
oppB2 - Staphylococcus aureus (strain USA300)
Length = 328
Score = 60.9 bits (141), Expect = 5e-08
Identities = 24/52 (46%), Positives = 40/52 (76%)
Frame = -3
Query: 665 MIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
++P++ G+ G L+GG++V+E +F+ PG+G LL+DS++ RDYPVIQ +L
Sbjct: 229 ILPIIPLLGISLGSLIGGTVVIENLFDIPGIGYLLMDSIKSRDYPVIQGCVL 280
>UniRef50_Q89RA5 Cluster: ABC transporter permease protein; n=2;
Bacteria|Rep: ABC transporter permease protein -
Bradyrhizobium japonicum
Length = 313
Score = 60.5 bits (140), Expect = 6e-08
Identities = 24/56 (42%), Positives = 41/56 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
NA+ P++T L+ G LL G+++ E++F+ PG G+L+VD+V RDY V+Q +L++
Sbjct: 234 NALTPIITLGALELGTLLSGAVLTEQIFSIPGFGKLIVDAVFNRDYAVVQGVVLVT 289
>UniRef50_Q87LX8 Cluster: Peptide ABC transporter, permease protein;
n=11; Vibrionaceae|Rep: Peptide ABC transporter,
permease protein - Vibrio parahaemolyticus
Length = 328
Score = 60.5 bits (140), Expect = 6e-08
Identities = 21/55 (38%), Positives = 40/55 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++P VT + G +GG +++E +FN+PGLG +L++++ RDY V+Q ++++
Sbjct: 246 NALLPSVTALSMSLGMAIGGQLIIEMIFNYPGLGTVLLNAIHARDYQVLQGQLII 300
>UniRef50_Q8U120 Cluster: Dipeptide transport system permease
protein; n=10; Archaea|Rep: Dipeptide transport system
permease protein - Pyrococcus furiosus
Length = 332
Score = 60.5 bits (140), Expect = 6e-08
Identities = 30/64 (46%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Frame = -3
Query: 698 GCPQTRAY----VNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYP 531
G P+ R Y NA++P+VT GLQFG LLGG+ + E VF PG+G V S++ D+P
Sbjct: 240 GVPKLRLYRHALKNALVPIVTVLGLQFGGLLGGTPITETVFGLPGMGSYAVQSIQNLDFP 299
Query: 530 VIQA 519
V+ A
Sbjct: 300 VVVA 303
Score = 34.7 bits (76), Expect = 3.6
Identities = 12/25 (48%), Positives = 21/25 (84%)
Frame = -2
Query: 507 FSLEFILINLVVDVLYAAINPAIRY 433
+++ +++ NLVVD+LYA I+P +RY
Sbjct: 308 YAIIYVVTNLVVDILYAIIDPRVRY 332
>UniRef50_Q9LCD2 Cluster: Dipeptide transporter DppB homolog; n=1;
Ochrobactrum anthropi|Rep: Dipeptide transporter DppB
homolog - Ochrobactrum anthropi
Length = 313
Score = 60.1 bits (139), Expect = 8e-08
Identities = 28/50 (56%), Positives = 36/50 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQ 522
NA+IPV+T + +LL G+++VE VF PGLG LLV SV RDYP+IQ
Sbjct: 233 NALIPVITVLAINISWLLSGAVIVEYVFGLPGLGSLLVRSVGYRDYPLIQ 282
>UniRef50_A3XDX8 Cluster: ABC-transport protein, inner membrane
component; n=1; Roseobacter sp. MED193|Rep:
ABC-transport protein, inner membrane component -
Roseobacter sp. MED193
Length = 317
Score = 60.1 bits (139), Expect = 8e-08
Identities = 25/55 (45%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
N P+VT + G+L+GG+I+VE V++ PG+GR LV + RDYP++QA +L+
Sbjct: 237 NISNPLVTTLSIYLGYLIGGAIIVEYVYSVPGMGRFLVQGLLNRDYPIVQATVLV 291
>UniRef50_A3I5Z0 Cluster: Oligopeptide ABC transporter, permease
protein; n=1; Bacillus sp. B14905|Rep: Oligopeptide ABC
transporter, permease protein - Bacillus sp. B14905
Length = 322
Score = 60.1 bits (139), Expect = 8e-08
Identities = 27/55 (49%), Positives = 37/55 (67%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IP + G+ GGSIVVE +F W GLG+LLV SV ++D+PV+ IL+
Sbjct: 239 NAVIPYINYVGVTIPSFFGGSIVVETLFGWSGLGQLLVKSVMLKDFPVLMGAILI 293
>UniRef50_A1S0Q2 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Thermofilum pendens Hrk 5|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Thermofilum pendens (strain Hrk 5)
Length = 341
Score = 60.1 bits (139), Expect = 8e-08
Identities = 23/55 (41%), Positives = 37/55 (67%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+IP++T GLQ LLGG+++ E FNW G+G L+ + + RDY ++Q + +
Sbjct: 261 NALIPILTMTGLQVAALLGGAVLTETTFNWEGVGLLVYEGILKRDYAIVQGAVTI 315
>UniRef50_Q895A2 Cluster: Putative permease, nickel or dipeptide
transport; n=1; Clostridium tetani|Rep: Putative
permease, nickel or dipeptide transport - Clostridium
tetani
Length = 315
Score = 59.7 bits (138), Expect = 1e-07
Identities = 24/61 (39%), Positives = 45/61 (73%)
Frame = -3
Query: 668 AMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNLF 489
+++PV+T G+ G L+GG++V+E +F++PGLG+L ++++ RDY +IQ IL + +F
Sbjct: 229 SLMPVLTLFGMSMGSLMGGTVVIEVLFSYPGLGKLAIEAITNRDYSMIQGFILFTGMLVF 288
Query: 488 L 486
+
Sbjct: 289 V 289
>UniRef50_Q7VVH4 Cluster: ABC-transport protein, inner membrane
component; n=15; Proteobacteria|Rep: ABC-transport
protein, inner membrane component - Bordetella pertussis
Length = 317
Score = 59.7 bits (138), Expect = 1e-07
Identities = 27/54 (50%), Positives = 39/54 (72%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA++P+VT L FG LL G+++ E+VF PG G+L+VD+V RDY V+Q +L
Sbjct: 237 NALMPIVTLVTLLFGELLAGAVLTEQVFTIPGFGKLIVDAVFNRDYAVVQGVVL 290
>UniRef50_Q5LPL4 Cluster: Dipeptide ABC trasnporter, permease
protein; n=2; Rhodobacteraceae|Rep: Dipeptide ABC
trasnporter, permease protein - Silicibacter pomeroyi
Length = 314
Score = 59.7 bits (138), Expect = 1e-07
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = -3
Query: 668 AMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLSRWNLF 489
A++P VT G+ GFLL ++ E VF+ PGLG+L++DS+ R+YPV+ +L S
Sbjct: 234 AILPTVTVIGVGMGFLLSAAVFTEIVFSRPGLGKLVIDSITTRNYPVVMGSVLFSTLIFV 293
Query: 488 LST 480
ST
Sbjct: 294 AST 296
>UniRef50_Q28NH1 Cluster: Binding-protein-dependent transport
systems inner membrane component; n=34; Bacteria|Rep:
Binding-protein-dependent transport systems inner
membrane component - Jannaschia sp. (strain CCS1)
Length = 338
Score = 59.7 bits (138), Expect = 1e-07
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A N M+PV+T GLQ G ++ +I+ E VF WPG+G L +++++ D PV+ A ++L
Sbjct: 251 ALKNTMVPVITVTGLQLGSIIAFAIITETVFQWPGVGLLFINAIQFVDIPVMAAYLML 308
>UniRef50_A6NRE3 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 330
Score = 59.7 bits (138), Expect = 1e-07
Identities = 29/64 (45%), Positives = 39/64 (60%)
Frame = -3
Query: 716 KGXRNLGCPQTRAYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRD 537
KG R A+ NA+IP+VT L GGSIV+E VF WPGLG++L+D + RD
Sbjct: 234 KGLREKVVVYIHAFRNALIPIVTITTWWVIGLFGGSIVIESVFLWPGLGKMLIDGLLQRD 293
Query: 536 YPVI 525
+ V+
Sbjct: 294 FAVV 297
>UniRef50_Q13J75 Cluster: ABC nickel transporter, inner membrane
subunit; n=1; Burkholderia xenovorans LB400|Rep: ABC
nickel transporter, inner membrane subunit -
Burkholderia xenovorans (strain LB400)
Length = 315
Score = 59.3 bits (137), Expect = 1e-07
Identities = 24/57 (42%), Positives = 36/57 (63%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
A N +P +T G QF ++ G+IVVE VF W G+G +DS+ RD+P +QA ++
Sbjct: 227 ALPNLAVPFLTTFGAQFALMIIGAIVVESVFAWQGIGAFFIDSIRFRDFPAMQAVLM 283
>UniRef50_A5N711 Cluster: OppB; n=1; Clostridium kluyveri DSM
555|Rep: OppB - Clostridium kluyveri DSM 555
Length = 312
Score = 59.3 bits (137), Expect = 1e-07
Identities = 24/58 (41%), Positives = 39/58 (67%)
Frame = -3
Query: 680 AYVNAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
A NA +P++T +Q G ++ GS++VE+VF+ G+G LL+D + DYP++Q LL
Sbjct: 229 ALKNAAVPIITICSIQIGVMIVGSVLVERVFSLSGIGSLLIDGINNSDYPIVQGVTLL 286
Score = 35.9 bits (79), Expect = 1.5
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = -2
Query: 495 FILINLVVDVLYAAINPAIRYK 430
F+L+NL+ D++YA I+P IRYK
Sbjct: 291 FLLLNLIADIIYAFIDPRIRYK 312
>UniRef50_A5FXR6 Cluster: Binding-protein-dependent transport
systems inner membrane component precursor; n=1;
Acidiphilium cryptum JF-5|Rep: Binding-protein-dependent
transport systems inner membrane component precursor -
Acidiphilium cryptum (strain JF-5)
Length = 314
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/55 (52%), Positives = 39/55 (70%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA+ P+VT GL F ++ GS++VE VF++PGLG LL S +DYPVI A +LL
Sbjct: 234 NALRPLVTILGLSFPYIFAGSVLVETVFDYPGLGFLLWRSALSQDYPVISAIVLL 288
>UniRef50_A5FQK1 Cluster: Nickel-transporting ATPase; n=2;
Dehalococcoides|Rep: Nickel-transporting ATPase -
Dehalococcoides sp. BAV1
Length = 305
Score = 59.3 bits (137), Expect = 1e-07
Identities = 27/54 (50%), Positives = 36/54 (66%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEIL 510
NA+IPVVT G + FL+ GS ++E +F+ PG+GRL V V RDY +I IL
Sbjct: 225 NALIPVVTVAGPELAFLIAGSFIIENIFSIPGVGRLFVQGVFARDYGLIMGTIL 278
>UniRef50_Q18K39 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease protein I; n=1; Haloquadratum
walsbyi DSM 16790|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
protein I - Haloquadratum walsbyi (strain DSM 16790)
Length = 319
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PVVT G+ F LL G + VE VF G GRLL+ S+E +D+P++Q +++
Sbjct: 236 NALLPVVTIAGILFALLLAGIVAVEIVFGIQGFGRLLIRSIERQDFPLVQGSVIV 290
Score = 33.5 bits (73), Expect = 8.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = -2
Query: 522 GGNSAFSLEFILINLVVDVLYAAINPAIRY 433
G S+ F+ +NL +D++Y +INP IRY
Sbjct: 286 GSVIVISIIFVFMNLFIDLVYMSINPKIRY 315
>UniRef50_Q8D4K2 Cluster: ABC-type dipeptide/oligopeptide/nickel
transport system, permease component; n=6;
Gammaproteobacteria|Rep: ABC-type
dipeptide/oligopeptide/nickel transport system, permease
component - Vibrio vulnificus
Length = 324
Score = 58.8 bits (136), Expect = 2e-07
Identities = 26/55 (47%), Positives = 37/55 (67%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PV T + GF GSI+ E VFN+ GLG +L+ + RDYP+IQA +L+
Sbjct: 245 NAILPVATAIAMAIGFSFAGSIMTEVVFNYQGLGNILLKGIVARDYPLIQAILLI 299
>UniRef50_Q7VP25 Cluster: Probable fimbrial outer membrane usher
protein; n=1; Haemophilus ducreyi|Rep: Probable fimbrial
outer membrane usher protein - Haemophilus ducreyi
Length = 833
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/71 (42%), Positives = 43/71 (60%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNA + I Q G+ I+ V+ G F I +LY G L V+++E DGSV Y V +
Sbjct: 292 IAKSNATVNISQKGHVIHTEKVAAGPFRIQNLYD-GVRGKLDVKVEEEDGSVQQYQVDTA 350
Query: 222 SVPLLQRQGRI 254
++P L R G+I
Sbjct: 351 NLPYLTRPGQI 361
>UniRef50_Q6D8N0 Cluster: Putative outer membrane usher protein;
n=1; Pectobacterium atrosepticum|Rep: Putative outer
membrane usher protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 830
Score = 58.8 bits (136), Expect = 2e-07
Identities = 29/71 (40%), Positives = 42/71 (59%)
Frame = +3
Query: 42 LAKSNAQITIKQNGYTIYQTYVSPGAFEISDLYSTSSSGDLLVEIKEADGSVNSYSVPFS 221
+AKSNA +T+ QNG IY+T V G F I D+ SG L V + E DG+V ++ +
Sbjct: 288 VAKSNATVTVTQNGRLIYETTVPAGPFAIQDM-KNGVSGTLDVRVTEEDGTVTTFQTESA 346
Query: 222 SVPLLQRQGRI 254
++P L R G +
Sbjct: 347 NLPYLTRPGHV 357
>UniRef50_Q6CYT3 Cluster: ABC transporter permease protein; n=38;
Proteobacteria|Rep: ABC transporter permease protein -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 325
Score = 58.8 bits (136), Expect = 2e-07
Identities = 22/56 (39%), Positives = 41/56 (73%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILLS 504
N +IP++T GL+ G L+ ++V E ++ WPG+G+L++DS+ + D PVI A ++++
Sbjct: 241 NTLIPLITVLGLELGSLIAFAVVTETIYAWPGMGKLIIDSIAVLDRPVILAYLMIT 296
>UniRef50_Q30Y57 Cluster: Oligopeptide ABC transporter, permease
protein; n=4; Proteobacteria|Rep: Oligopeptide ABC
transporter, permease protein - Desulfovibrio
desulfuricans (strain G20)
Length = 343
Score = 58.8 bits (136), Expect = 2e-07
Identities = 25/55 (45%), Positives = 38/55 (69%)
Frame = -3
Query: 671 NAMIPVVTNDGLQFGFLLGGSIVVEKVFNWPGLGRLLVDSVEMRDYPVIQAEILL 507
NA++PV+T GL L+GGS+++E +F PGLG+L +V RDYP+I ++L
Sbjct: 259 NALLPVITILGLSVPGLIGGSVIIESIFALPGLGQLFYGAVMARDYPLIMGNLVL 313
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 998,806,591
Number of Sequences: 1657284
Number of extensions: 20910209
Number of successful extensions: 49297
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 46890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49265
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89815291940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -