Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0143.Seq
         (967 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    27   0.84 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   4.5  
CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline...    24   7.8  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    24   7.8  

>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 27.1 bits (57), Expect = 0.84
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +3

Query: 267 HWRNTEPIVMNSRRANLPRPRCSGADRGERPGQV*P 374
           +WR T P V  +     P P    +  GE+PG++ P
Sbjct: 420 YWRATHPPVRPTPSVPRPLPSQEASPSGEQPGRMGP 455


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = -2

Query: 915 CGPFR*LPQLXKRGIXPKAIXLGKPQVF 832
           CGPFR LP +  R I   A  +  PQ F
Sbjct: 529 CGPFRGLPSVWDRAI---AAFMKMPQFF 553


>CR954256-10|CAJ14151.1|  548|Anopheles gambiae putative alkaline
           phosphatase protein.
          Length = 548

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 19/61 (31%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
 Frame = +2

Query: 365 GLTSGHGV*HRLTSPVK*SHPYLYLIAGLMAA*STSTTKLIRINSSEKAEFPPESPG-NH 541
           GL S   + H         HP  +L A L    ST         S  K  F P SP   H
Sbjct: 15  GLVSTSPLHHEAEEEYDPMHPQRFLFADLAPTASTDQRAKRSSASMPKLRFEPPSPNEQH 74

Query: 542 A 544
           A
Sbjct: 75  A 75


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 23.8 bits (49), Expect = 7.8
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 412 NWRRQAVLNAMPTGQT*PGRSPRSAPL 332
           NW++Q ++ ++P     PG S  S P+
Sbjct: 456 NWKKQRLVLSIPKPGKRPGESGSSRPI 482


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,005,632
Number of Sequences: 2352
Number of extensions: 20855
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 105241344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)