Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0131.Seq
(944 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 78 4e-13
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 66 9e-10
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 64 4e-09
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 63 1e-08
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 48 5e-04
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 44 0.006
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 40 0.092
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 38 0.28
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 37 0.65
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 37 0.65
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 37 0.86
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 1.5
UniRef50_A4E6L6 Cluster: Putative uncharacterized protein; n=1; ... 34 4.6
UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;... 34 6.1
UniRef50_Q7RKU4 Cluster: Synthetic antigen of P.falciparum, puta... 34 6.1
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 77.8 bits (183), Expect = 4e-13
Identities = 36/42 (85%), Positives = 37/42 (88%)
Frame = +1
Query: 523 HWPSFYNVVTGKTLALPNLIALQHIPLFASWRNSEEARTDRP 648
HWPSFYNVVTGKTLALPNLIALQHIPL + SEEARTDRP
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRP 46
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 66.5 bits (155), Expect = 9e-10
Identities = 29/29 (100%), Positives = 29/29 (100%)
Frame = +3
Query: 519 NSLAVVLQRRDWENPGVTQLNRLAAHPPF 605
NSLAVVLQRRDWENPGVTQLNRLAAHPPF
Sbjct: 20 NSLAVVLQRRDWENPGVTQLNRLAAHPPF 48
Score = 38.7 bits (86), Expect = 0.21
Identities = 16/17 (94%), Positives = 16/17 (94%)
Frame = +1
Query: 598 PLFASWRNSEEARTDRP 648
P FASWRNSEEARTDRP
Sbjct: 46 PPFASWRNSEEARTDRP 62
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 64.5 bits (150), Expect = 4e-09
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +3
Query: 519 NSLAVVLQRRDWENPGVTQLNRLAAHPPF 605
+SLAVVLQRRDWENPGVTQLNRLAAHPPF
Sbjct: 6 DSLAVVLQRRDWENPGVTQLNRLAAHPPF 34
Score = 50.0 bits (114), Expect = 9e-05
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 598 PLFASWRNSEEARTDRPFPTVAHLNGEWQ 684
P FASWRNSEEARTDRP + LNGEW+
Sbjct: 32 PPFASWRNSEEARTDRPSQQLRSLNGEWR 60
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 62.9 bits (146), Expect = 1e-08
Identities = 27/28 (96%), Positives = 28/28 (100%)
Frame = +3
Query: 522 SLAVVLQRRDWENPGVTQLNRLAAHPPF 605
+LAVVLQRRDWENPGVTQLNRLAAHPPF
Sbjct: 25 ALAVVLQRRDWENPGVTQLNRLAAHPPF 52
Score = 50.0 bits (114), Expect = 9e-05
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 598 PLFASWRNSEEARTDRPFPTVAHLNGEWQ 684
P FASWRNSEEARTDRP + LNGEW+
Sbjct: 50 PPFASWRNSEEARTDRPSQQLRSLNGEWR 78
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 62.5 bits (145), Expect = 2e-08
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +3
Query: 525 LAVVLQRRDWENPGVTQLNRLAAHPPF 605
LAVVLQRRDWENPGVTQLNRLAAHPPF
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPF 94
Score = 50.0 bits (114), Expect = 9e-05
Identities = 21/29 (72%), Positives = 23/29 (79%)
Frame = +1
Query: 598 PLFASWRNSEEARTDRPFPTVAHLNGEWQ 684
P FASWRNSEEARTDRP + LNGEW+
Sbjct: 92 PPFASWRNSEEARTDRPSQQLRXLNGEWR 120
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 47.6 bits (108), Expect = 5e-04
Identities = 19/28 (67%), Positives = 22/28 (78%)
Frame = +3
Query: 522 SLAVVLQRRDWENPGVTQLNRLAAHPPF 605
SL +L RRDWENP +TQ +RL AHPPF
Sbjct: 14 SLPQILSRRDWENPQITQYHRLEAHPPF 41
Score = 35.5 bits (78), Expect = 2.0
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 586 LQHIPLFASWRNSEEARTDRPFPTVAHLNGEW 681
L+ P F SWR+ E A+ DRP P LNG W
Sbjct: 35 LEAHPPFHSWRDVESAQKDRPSPQQQTLNGLW 66
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 44.0 bits (99), Expect = 0.006
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +1
Query: 613 WRNSEEARTDRPFPTVAHLNGEWQIV 690
WRNSEEARTDRP + LNGEW+++
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRLM 72
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 39.9 bits (89), Expect = 0.092
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 525 LAVVLQRRDWENPGVTQLNRLAAHPP 602
LA +L R DW+NP +T +NRL +H P
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTP 43
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 38.3 bits (85), Expect = 0.28
Identities = 19/31 (61%), Positives = 20/31 (64%)
Frame = -3
Query: 690 YNLPFAIQVRNCWERAIGAGLFAITPAGEKG 598
+ PFAIQ RAIGAGLFAITP E G
Sbjct: 8 HQAPFAIQAAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 37.1 bits (82), Expect = 0.65
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = +3
Query: 489 TQFAL*WSYXNSLAVVLQRRDWENPGVTQLNRLAA 593
TQ L +S+ S V + DWENP V Q+NRL A
Sbjct: 13 TQVCLLFSFTGSAKTVQVKNDWENPDVIQINRLPA 47
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 37.1 bits (82), Expect = 0.65
Identities = 16/32 (50%), Positives = 18/32 (56%)
Frame = +3
Query: 510 SYXNSLAVVLQRRDWENPGVTQLNRLAAHPPF 605
S+ VL R DW N +T LNRL AHP F
Sbjct: 9 SHTPDFHAVLAREDWHNQTITHLNRLPAHPVF 40
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 36.7 bits (81), Expect = 0.86
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = +3
Query: 522 SLAVVLQRRDWENPGVTQLNRLAAHPP 602
SL ++ RRDWENP Q+N++ AH P
Sbjct: 3 SLQHIINRRDWENPITVQVNQVKAHSP 29
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 1.5
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +3
Query: 534 VLQRRDWENPGVTQLNRLAAHPP 602
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A4E6L6 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 452
Score = 34.3 bits (75), Expect = 4.6
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = -1
Query: 653 GKGRSVRASSLLRQLAKRGMCCKAIKLGNARVFPV 549
G G++V +LLR LA+RG+ C A K G + P+
Sbjct: 8 GSGKTVVTCALLRALARRGLACAAFKCGPDYIDPL 42
>UniRef50_UPI0000F1EDC6 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 195
Score = 33.9 bits (74), Expect = 6.1
Identities = 14/14 (100%), Positives = 14/14 (100%)
Frame = +3
Query: 522 SLAVVLQRRDWENP 563
SLAVVLQRRDWENP
Sbjct: 178 SLAVVLQRRDWENP 191
>UniRef50_Q7RKU4 Cluster: Synthetic antigen of P.falciparum,
putative; n=3; Plasmodium (Vinckeia)|Rep: Synthetic
antigen of P.falciparum, putative - Plasmodium yoelii
yoelii
Length = 486
Score = 33.9 bits (74), Expect = 6.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 2 NERTERFIVFSRAYVYVRSDVDGTFVSCVRS 94
NE E F +F RA+ + +DVD F C S
Sbjct: 303 NENVEDFFIFDRAFSNISNDVDSMFTECANS 333
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 871,138,568
Number of Sequences: 1657284
Number of extensions: 17120663
Number of successful extensions: 41481
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 39823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41444
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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