Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ps4M0131.Seq
         (944 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    28   0.36 
AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    27   1.1  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   7.7  

>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1154

 Score = 28.3 bits (60), Expect = 0.36
 Identities = 14/52 (26%), Positives = 21/52 (40%)
 Frame = -2

Query: 508 HYRANWVPGPXRVXETVSSQTFKQTRTSPRLHGCDNRRVALASALRQETRKY 353
           HY  +WVP    V +  +      T+  P   G    R  L +A+   T +Y
Sbjct: 753 HYNLSWVPHVKAVIQKATQIVQAVTQLMPNHRGPKTSRCRLLAAVADSTMRY 804


>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = -1

Query: 680 HSPFRCATVG---KGRSVRASSLLRQLAKRGMCCKAIKLGNARVFPVTTL*ND 531
           HS  R AT+    +G++V  + LLR      +  +A KL N  VFP T   N+
Sbjct: 195 HSRLRTATLRNDFEGQAVLINCLLRNYLHYSLYDQADKLVNKSVFPETASNNE 247


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 7.7
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 423 GLVRVCLNVCDDTVSXTRXGPGTQFAL 503
           GL+ +CL + +DT   +R G G   A+
Sbjct: 911 GLLPICLAIKEDTRVHSRRGTGLNCAI 937


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 909,372
Number of Sequences: 2352
Number of extensions: 18551
Number of successful extensions: 41
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 103362750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)