Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ps4M0130.Seq
(962 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 79 1e-13
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 79 1e-13
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 79 1e-13
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 79 1e-13
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 51 5e-05
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 48 3e-04
UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp. ... 44 0.008
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 42 0.018
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 41 0.054
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 40 0.13
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 39 0.17
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.29
UniRef50_A1V9J8 Cluster: Two component, sigma54 specific, transc... 34 6.2
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 357
NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 79 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 113
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 357
NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 33 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 67
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 357
NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 37 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 71
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 79.4 bits (187), Expect = 1e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 357
NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR
Sbjct: 19 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 53
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 50.8 bits (116), Expect = 5e-05
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 351
NP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 26 NPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 48.4 bits (110), Expect = 3e-04
Identities = 27/44 (61%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Frame = +2
Query: 251 ETLALPNLIALQHIPLSPAGVIAKRPAPIALPNS--CAXEWRMA 376
+TLALPNLIALQHIPLSPAGVI++ A P+ + +WRMA
Sbjct: 16 KTLALPNLIALQHIPLSPAGVISEE-ARTDRPSQQLRSLKWRMA 58
Score = 34.3 bits (75), Expect = 4.7
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +3
Query: 219 HWPSFYNVVTGKPWRYP 269
HWPSFYNVVTGK P
Sbjct: 5 HWPSFYNVVTGKTLALP 21
>UniRef50_A7BPF2 Cluster: LacZ alpha peptide; n=1; Beggiatoa sp.
SS|Rep: LacZ alpha peptide - Beggiatoa sp. SS
Length = 73
Score = 43.6 bits (98), Expect = 0.008
Identities = 25/48 (52%), Positives = 28/48 (58%)
Frame = -3
Query: 762 PGPYAXXFRFLPFLSRPRSPAFPVKL*IGGSPLGFRFSALRHLDPKKL 619
P P+A FL + FP + G PLGFRFSALRHLDPKKL
Sbjct: 30 PAPFAFFPSFLATFA-----GFPRQALNRGLPLGFRFSALRHLDPKKL 72
Score = 39.5 bits (88), Expect = 0.13
Identities = 21/45 (46%), Positives = 23/45 (51%)
Frame = -1
Query: 800 GVXVYRNVTRYXCQALTPVXFAFFPSFLAHVRRLSPSSSKSGAPL 666
GV V R+VT AL P FAFFPSFLA + G PL
Sbjct: 13 GVVVTRSVTATLASALAPAPFAFFPSFLATFAGFPRQALNRGLPL 57
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 42.3 bits (95), Expect = 0.018
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLR 357
N +T LNRL AHP FASWR+ AR + PS + R
Sbjct: 25 NQTITHLNRLPAHPVFASWRDELAARDNLPSSRRR 59
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 40.7 bits (91), Expect = 0.054
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +1
Query: 307 WRNSEEARTDRPSQQLR 357
WRNSEEARTDRPSQQLR
Sbjct: 47 WRNSEEARTDRPSQQLR 63
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 39.5 bits (88), Expect = 0.13
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = -3
Query: 378 FAIRHSXAQLLGRAIGAGLFAITPAGERG 292
FAI+ AQLLGRAIGAGLFAITP E G
Sbjct: 12 FAIQ--AAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 39.1 bits (87), Expect = 0.17
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +1
Query: 253 NPGVTQLNRLAAHPPFASWRNSEEARTDRPS 345
NP +T +NRL +H P WR+++ AR PS
Sbjct: 29 NPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 38.3 bits (85), Expect = 0.29
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = +3
Query: 138 FRQEKKKKKTRGGARYXIRPIVSRIT 215
F Q + ++ RGGARY IRPIVSRIT
Sbjct: 250 FNQAYRYRRPRGGARYPIRPIVSRIT 275
>UniRef50_A1V9J8 Cluster: Two component, sigma54 specific,
transcriptional regulator, Fis family; n=3;
Proteobacteria|Rep: Two component, sigma54 specific,
transcriptional regulator, Fis family - Desulfovibrio
vulgaris subsp. vulgaris (strain DP4)
Length = 451
Score = 33.9 bits (74), Expect = 6.2
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = -1
Query: 674 APL*GSDLVLYGTSTPKNLIRVMVHVVGHRPDRRFFAL 561
AP S L+L T T K L MVH+ R DRRF A+
Sbjct: 161 APAEASVLILGETGTGKELAARMVHLFSRRSDRRFLAI 198
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 885,532,533
Number of Sequences: 1657284
Number of extensions: 17930364
Number of successful extensions: 35976
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 34691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35908
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 89407040613
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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